| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627586
Identifier: 169627586
GI number: 169627586
Start: 477496
End: 478416
Strand: Reverse
Name: 169627586
Synonym: MAB_0482c
Alternate gene names: NA
Gene position: 478416-477496 (Counterclockwise)
Preceding gene: 169627587
Following gene: 169627585
Centisome position: 9.44
GC content: 65.8
Gene sequence:
>921_bases ATGGTGCTGGCAGCTGCGATCCAACTCGAGGCAGTCATCGGCGATGTGGCCGCGAATCTGGGCAAGTGCGCACAACTGGC CGCGGAGGCCGGGCGTGCCGGCGCAAAAATCATCGCGCTCCCCGAGTTCTTCACCACCGGGATCGCGTTCGACCCGGCAC TCCGAGACGCCGCACTACCTCCCGAAGGAGCTGCCACCGAGCTGTTGCGGACCCTGGCTCACCACTACGACGCGCTGGTC GGCGGCTCGTTCCTGTGCCGCGACAAAGATGGGCATGTCCGCAACGCCTATTTCGCCGCGGACGCGACCGGGATGGTCGG CCGGCACGACAAGGATCTACCGACCATGTGGGAGAACGCCTTCTACATCGGAGGTCAGGACGACGGGGTATTTCGCGCCG GCACACTCAACGTCGGTGCGGCGGTGTGCTGGGAGCTGATGCGTACCCGCACGGCGCGGCGCATGCGCGCTCACGTCGAT CTGGTGATGGCGGGCTCCGGTTGGTGGTCGATACCTCCATGGCGGCCACGCGCCACCTTCGCGGCCATGGAGCGCCGCAA TCACCAAACCGCCAGGGCGGCGGCCGCCACGTTCGCCAAATATGTTGGTGCCCCGGTTGTTCACGCCGCGCACGTCGGCG AATTCCACTGTGCCATGCCCTGGATCCCCCTCAAATATCGCGGCCACTTTGAAGGCTCCACCCTCATCACCGACGGTACC GGCAGCATCGTCGCCGAACGCCGCCCCGAAGAAGGCCCAGGCATCGTTCTCGGCGATATCCACCTTGGGCGCCTGCCACC CGCGGCCGAGGTTCCCGACCGATTCTGGCTACACAGCCGGGGCGCATTACCCACCGCGGCATGGCATTACCAAAGGTGGC ACGGCCGTAGGTGGTATCGCAGAAACATGGTGACCACATGA
Upstream 100 bases:
>100_bases TGCAGCGCGTACTGGAGTTGGGCCGCGACATCATCGAGCGCGGGCTCGTCCGCACATAAAGTCTTGTAGTAGCGCTCAGT TTTATAGTAGCGTTCGGTTT
Downstream 100 bases:
>100_bases GCATCGTCGTCCGCATCGGGTTGGCCGAGCTGGCTCTCGGCGCGCTCTTGGGATGGGTAGTAGCAGCCAACTTTCTTGCG CCACAATTACTCAGGAGGGC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 306; Mature: 306
Protein sequence:
>306_residues MVLAAAIQLEAVIGDVAANLGKCAQLAAEAGRAGAKIIALPEFFTTGIAFDPALRDAALPPEGAATELLRTLAHHYDALV GGSFLCRDKDGHVRNAYFAADATGMVGRHDKDLPTMWENAFYIGGQDDGVFRAGTLNVGAAVCWELMRTRTARRMRAHVD LVMAGSGWWSIPPWRPRATFAAMERRNHQTARAAAATFAKYVGAPVVHAAHVGEFHCAMPWIPLKYRGHFEGSTLITDGT GSIVAERRPEEGPGIVLGDIHLGRLPPAAEVPDRFWLHSRGALPTAAWHYQRWHGRRWYRRNMVTT
Sequences:
>Translated_306_residues MVLAAAIQLEAVIGDVAANLGKCAQLAAEAGRAGAKIIALPEFFTTGIAFDPALRDAALPPEGAATELLRTLAHHYDALV GGSFLCRDKDGHVRNAYFAADATGMVGRHDKDLPTMWENAFYIGGQDDGVFRAGTLNVGAAVCWELMRTRTARRMRAHVD LVMAGSGWWSIPPWRPRATFAAMERRNHQTARAAAATFAKYVGAPVVHAAHVGEFHCAMPWIPLKYRGHFEGSTLITDGT GSIVAERRPEEGPGIVLGDIHLGRLPPAAEVPDRFWLHSRGALPTAAWHYQRWHGRRWYRRNMVTT >Mature_306_residues MVLAAAIQLEAVIGDVAANLGKCAQLAAEAGRAGAKIIALPEFFTTGIAFDPALRDAALPPEGAATELLRTLAHHYDALV GGSFLCRDKDGHVRNAYFAADATGMVGRHDKDLPTMWENAFYIGGQDDGVFRAGTLNVGAAVCWELMRTRTARRMRAHVD LVMAGSGWWSIPPWRPRATFAAMERRNHQTARAAAATFAKYVGAPVVHAAHVGEFHCAMPWIPLKYRGHFEGSTLITDGT GSIVAERRPEEGPGIVLGDIHLGRLPPAAEVPDRFWLHSRGALPTAAWHYQRWHGRRWYRRNMVTT
Specific function: Unknown
COG id: COG0388
COG function: function code R; Predicted amidohydrolase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33478; Mature: 33478
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.3 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLAAAIQLEAVIGDVAANLGKCAQLAAEAGRAGAKIIALPEFFTTGIAFDPALRDAALP CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCEEECHHHHHCCCC PEGAATELLRTLAHHYDALVGGSFLCRDKDGHVRNAYFAADATGMVGRHDKDLPTMWENA CCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCE FYIGGQDDGVFRAGTLNVGAAVCWELMRTRTARRMRAHVDLVMAGSGWWSIPPWRPRATF EEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHH AAMERRNHQTARAAAATFAKYVGAPVVHAAHVGEFHCAMPWIPLKYRGHFEGSTLITDGT HHHHHHCCHHHHHHHHHHHHHHCCCCEEHHHCCCEEECCCCEEEEECCCCCCCEEEECCC GSIVAERRPEEGPGIVLGDIHLGRLPPAAEVPDRFWLHSRGALPTAAWHYQRWHGRRWYR CCEEECCCCCCCCCEEEECEEECCCCCCCCCCCHHEECCCCCCCHHHHHHHHHHCHHHHH RNMVTT HCCCCC >Mature Secondary Structure MVLAAAIQLEAVIGDVAANLGKCAQLAAEAGRAGAKIIALPEFFTTGIAFDPALRDAALP CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHCCEEECHHHHHCCCC PEGAATELLRTLAHHYDALVGGSFLCRDKDGHVRNAYFAADATGMVGRHDKDLPTMWENA CCCHHHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEEEECCCCCCCCCCCCCCCHHHCCE FYIGGQDDGVFRAGTLNVGAAVCWELMRTRTARRMRAHVDLVMAGSGWWSIPPWRPRATF EEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCCCCCCCCCCHHH AAMERRNHQTARAAAATFAKYVGAPVVHAAHVGEFHCAMPWIPLKYRGHFEGSTLITDGT HHHHHHCCHHHHHHHHHHHHHHCCCCEEHHHCCCEEECCCCEEEEECCCCCCCEEEECCC GSIVAERRPEEGPGIVLGDIHLGRLPPAAEVPDRFWLHSRGALPTAAWHYQRWHGRRWYR CCEEECCCCCCCCCEEEECEEECCCCCCCCCCCHHEECCCCCCCHHHHHHHHHHCHHHHH RNMVTT HCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA