| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627584
Identifier: 169627584
GI number: 169627584
Start: 476024
End: 477118
Strand: Direct
Name: 169627584
Synonym: MAB_0480
Alternate gene names: NA
Gene position: 476024-477118 (Clockwise)
Preceding gene: 169627583
Following gene: 169627588
Centisome position: 9.39
GC content: 59.0
Gene sequence:
>1095_bases ATGTCATCACATGCCACCTCAAAGATCTTCATGATCGGTGCCACGGGTGCCCAGGGCATTCCCGTCACACGGTCGCTGGT TGCCGATGGGAAGTACTCCGTCCGATTCCTCACTCGCGATGCCACCGGTGCGCGGGCGAGAGCGCTGCTCGAACTGGGTA ACACGTCGGCCCTGGAAGGCACTTTCACTGACGAAACCATTCTGCGCGAAGGGTTTCGGAGATGTGACGGTGCCTTCATC AATATCGATGGATTCAATACCGGTGAGAAGACCGAGATGTACTGGGCCATCCGCGCGTACGAGATCGCAATGGAAGAGGG GATCAGATTTCTCGTATACGGAAATCTCGACTACGGGCTCAAGAAGGCTGGTTACGACTCCAGGTACCGTGTCGGCCACT ATGACGGCAAGGGGCGTGTCGCCGAATGGATCCTGCTTCAGAATCAGTCAAACGCGGAGCGGATGGGTGCGGCGATCTTC ACATCCGGCCCGTACATTGAGATGACAATCTCGCCGCTGACTCCGATGGCGCCCACCGTCGAGGAGGGCGTCGTCACCTG GCGGGTTCCGCTGGGAGGCGGAGCTGTACCCCATGTGTCCCTTGAGGATTGCGGTTACTACGTCAGGTGGCTCTTCGACA ACACCGATCGGTCCAACGGCATGGACCTCGAAGTGGCTATCGACCACATTCCGTACAGTGAGCTCGCCCGGGCGTTCGAG AAGGTCACCGGGCATCCCGCGCAGTACATAGACACGGACGTGGACACCTACTGGCAGGGGCCACTTGGGGGGATCGCCGA TAGGCCGGCCGGATATAACGCGGCCCCGGATGACCCCAGCACCATGACATTTCGAGACAACTTCACGGGTTTTTGGAACT TGTGGAAAGACGGAATCGTCAAACGTGATTACGTACTGCTGGATGAAATCCATCCGAACAGGATCCGTACGGCCGAGCAA TGGTTCAGGCGCGAGGAGGAACTGGGCAGGAAGCGCGGGAGAGGCGGCCTGTGGGAGCGGGTCCAACCGGAAAACTGGAG TCTCGACGCGGCTGTTCTGAAGAGTAGCCAAGACCTGCGGACCGGAAAGCTATGA
Upstream 100 bases:
>100_bases GCGGCCAATTTCGGACTACCGTCCGGCGATTAGTGGTCAACAGGGGCCGCCCCTGCTGCCGCATCTAAATGTTGTATATA CACCTTAGGAGCACACCGCA
Downstream 100 bases:
>100_bases GCAAAGGCGAACCTATTGGACCGCGACCAGTACCAGGCTGCCGCTCATCGCCACGAATGAGGTGAAGGTGGCAACCTTGA AACTGGTGTTGGAGGTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: NmrA-Family Protein
Number of amino acids: Translated: 364; Mature: 363
Protein sequence:
>364_residues MSSHATSKIFMIGATGAQGIPVTRSLVADGKYSVRFLTRDATGARARALLELGNTSALEGTFTDETILREGFRRCDGAFI NIDGFNTGEKTEMYWAIRAYEIAMEEGIRFLVYGNLDYGLKKAGYDSRYRVGHYDGKGRVAEWILLQNQSNAERMGAAIF TSGPYIEMTISPLTPMAPTVEEGVVTWRVPLGGGAVPHVSLEDCGYYVRWLFDNTDRSNGMDLEVAIDHIPYSELARAFE KVTGHPAQYIDTDVDTYWQGPLGGIADRPAGYNAAPDDPSTMTFRDNFTGFWNLWKDGIVKRDYVLLDEIHPNRIRTAEQ WFRREEELGRKRGRGGLWERVQPENWSLDAAVLKSSQDLRTGKL
Sequences:
>Translated_364_residues MSSHATSKIFMIGATGAQGIPVTRSLVADGKYSVRFLTRDATGARARALLELGNTSALEGTFTDETILREGFRRCDGAFI NIDGFNTGEKTEMYWAIRAYEIAMEEGIRFLVYGNLDYGLKKAGYDSRYRVGHYDGKGRVAEWILLQNQSNAERMGAAIF TSGPYIEMTISPLTPMAPTVEEGVVTWRVPLGGGAVPHVSLEDCGYYVRWLFDNTDRSNGMDLEVAIDHIPYSELARAFE KVTGHPAQYIDTDVDTYWQGPLGGIADRPAGYNAAPDDPSTMTFRDNFTGFWNLWKDGIVKRDYVLLDEIHPNRIRTAEQ WFRREEELGRKRGRGGLWERVQPENWSLDAAVLKSSQDLRTGKL >Mature_363_residues SSHATSKIFMIGATGAQGIPVTRSLVADGKYSVRFLTRDATGARARALLELGNTSALEGTFTDETILREGFRRCDGAFIN IDGFNTGEKTEMYWAIRAYEIAMEEGIRFLVYGNLDYGLKKAGYDSRYRVGHYDGKGRVAEWILLQNQSNAERMGAAIFT SGPYIEMTISPLTPMAPTVEEGVVTWRVPLGGGAVPHVSLEDCGYYVRWLFDNTDRSNGMDLEVAIDHIPYSELARAFEK VTGHPAQYIDTDVDTYWQGPLGGIADRPAGYNAAPDDPSTMTFRDNFTGFWNLWKDGIVKRDYVLLDEIHPNRIRTAEQW FRREEELGRKRGRGGLWERVQPENWSLDAAVLKSSQDLRTGKL
Specific function: Unknown
COG id: COG0702
COG function: function code MG; Predicted nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40849; Mature: 40718
Theoretical pI: Translated: 5.32; Mature: 5.32
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSSHATSKIFMIGATGAQGIPVTRSLVADGKYSVRFLTRDATGARARALLELGNTSALEG CCCCCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCCEECC TFTDETILREGFRRCDGAFINIDGFNTGEKTEMYWAIRAYEIAMEEGIRFLVYGNLDYGL CCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEHEEEEHHCCCEEEEEECCCCCH KKAGYDSRYRVGHYDGKGRVAEWILLQNQSNAERMGAAIFTSGPYIEMTISPLTPMAPTV HHCCCCCCEEEEEECCCCCEEEEEEEECCCCHHHHCEEEEECCCEEEEEECCCCCCCCCH EEGVVTWRVPLGGGAVPHVSLEDCGYYVRWLFDNTDRSNGMDLEVAIDHIPYSELARAFE HCCEEEEEEECCCCCCCCCCHHHCCEEEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHH KVTGHPAQYIDTDVDTYWQGPLGGIADRPAGYNAAPDDPSTMTFRDNFTGFWNLWKDGIV HHHCCCHHHHCCCCHHEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCC KRDYVLLDEIHPNRIRTAEQWFRREEELGRKRGRGGLWERVQPENWSLDAAVLKSSQDLR CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCC TGKL CCCC >Mature Secondary Structure SSHATSKIFMIGATGAQGIPVTRSLVADGKYSVRFLTRDATGARARALLELGNTSALEG CCCCCEEEEEEECCCCCCCCCHHHHHCCCCEEEEEEEECCCCHHHHHHHHCCCCCEECC TFTDETILREGFRRCDGAFINIDGFNTGEKTEMYWAIRAYEIAMEEGIRFLVYGNLDYGL CCCHHHHHHHHHHHHCCCEEEECCCCCCCCCEEEEEEEHEEEEHHCCCEEEEEECCCCCH KKAGYDSRYRVGHYDGKGRVAEWILLQNQSNAERMGAAIFTSGPYIEMTISPLTPMAPTV HHCCCCCCEEEEEECCCCCEEEEEEEECCCCHHHHCEEEEECCCEEEEEECCCCCCCCCH EEGVVTWRVPLGGGAVPHVSLEDCGYYVRWLFDNTDRSNGMDLEVAIDHIPYSELARAFE HCCEEEEEEECCCCCCCCCCHHHCCEEEEEEEECCCCCCCCEEEEEEECCCHHHHHHHHH KVTGHPAQYIDTDVDTYWQGPLGGIADRPAGYNAAPDDPSTMTFRDNFTGFWNLWKDGIV HHHCCCHHHHCCCCHHEECCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHHHHHHHCCCC KRDYVLLDEIHPNRIRTAEQWFRREEELGRKRGRGGLWERVQPENWSLDAAVLKSSQDLR CCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHCCCCCCC TGKL CCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA