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The map label for this gene is mmpS4 [H]

Identifier: 169627581

GI number: 169627581

Start: 472009

End: 472470

Strand: Direct

Name: mmpS4 [H]

Synonym: MAB_0477

Alternate gene names: 169627581

Gene position: 472009-472470 (Clockwise)

Preceding gene: 169627579

Following gene: 169627582

Centisome position: 9.32

GC content: 60.82

Gene sequence:

>462_bases
ATGAGCCGACGCAAGCGATCAAAAGGTCAAGCCGGCCGAATTCTGGGCGCGTTGTGGATGCCCCTGGTGGCAGTGATCGT
CATCGCGGTCGTGGGTTTCGGGGTCAACCGGATTCGGGAGAAGTCGCAGGCCATAAGCCATCCGCCGACGACGCGTCCGA
TTCCGGCCACGGTGGTCCAGATCAATCCCAAGAACGTCACCTATGAGGTGTTCGGCAATCTGGGAACTAGCGGGAAAGTG
TCCTATGCCAATCTCAATAGCGAACCCGTCGACGTCGTGCTGACGTCACTGCCATGGTCGGTTTCGGAGACCACGATGTC
GTCGGCGGCTTCATTGAGCCTGGTCGCACAGGTGGATGGGGATTCGCTGGGATGCCGTATCCGCGTCAACGGTGAGGTCC
GTGAGGAACAGGTCGTCAACCACACCGGCGCCGCGGTCGCATGCACGGTGACGGCAGCATGA

Upstream 100 bases:

>100_bases
GGGGATTCCGTGTACGGGGATACCTCCCCGGGCAGGTAACGAGCGCCGAGGAGGATTGCGTGTCCGCTGTTCTTACCGTC
CCGGCCGGAGGTGCTCAGCG

Downstream 100 bases:

>100_bases
CCTCGGGACAGCAGCCGCCGCAGGATGCGGACACCGGGCCGGTGCTGGTGCCGCCCACCCCGCCGGTAGTGAAGGAACCT
GAAAAGCGCCCTGGGCCAGC

Product: membrane protein MmpS

Products: NA

Alternate protein names: PGB14T-X [H]

Number of amino acids: Translated: 153; Mature: 152

Protein sequence:

>153_residues
MSRRKRSKGQAGRILGALWMPLVAVIVIAVVGFGVNRIREKSQAISHPPTTRPIPATVVQINPKNVTYEVFGNLGTSGKV
SYANLNSEPVDVVLTSLPWSVSETTMSSAASLSLVAQVDGDSLGCRIRVNGEVREEQVVNHTGAAVACTVTAA

Sequences:

>Translated_153_residues
MSRRKRSKGQAGRILGALWMPLVAVIVIAVVGFGVNRIREKSQAISHPPTTRPIPATVVQINPKNVTYEVFGNLGTSGKV
SYANLNSEPVDVVLTSLPWSVSETTMSSAASLSLVAQVDGDSLGCRIRVNGEVREEQVVNHTGAAVACTVTAA
>Mature_152_residues
SRRKRSKGQAGRILGALWMPLVAVIVIAVVGFGVNRIREKSQAISHPPTTRPIPATVVQINPKNVTYEVFGNLGTSGKVS
YANLNSEPVDVVLTSLPWSVSETTMSSAASLSLVAQVDGDSLGCRIRVNGEVREEQVVNHTGAAVACTVTAA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mmpS family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008693 [H]

Pfam domain/function: PF05423 Mycobact_memb [H]

EC number: NA

Molecular weight: Translated: 16154; Mature: 16023

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRRKRSKGQAGRILGALWMPLVAVIVIAVVGFGVNRIREKSQAISHPPTTRPIPATVVQ
CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEE
INPKNVTYEVFGNLGTSGKVSYANLNSEPVDVVLTSLPWSVSETTMSSAASLSLVAQVDG
ECCCCEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHCCCEEEEEEEECC
DSLGCRIRVNGEVREEQVVNHTGAAVACTVTAA
CCCEEEEEECCCCCHHHHHCCCCCEEEEEEECC
>Mature Secondary Structure 
SRRKRSKGQAGRILGALWMPLVAVIVIAVVGFGVNRIREKSQAISHPPTTRPIPATVVQ
CCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCEEEEE
INPKNVTYEVFGNLGTSGKVSYANLNSEPVDVVLTSLPWSVSETTMSSAASLSLVAQVDG
ECCCCEEEEEEECCCCCCEEEEECCCCCCEEEEEECCCCCCCHHHHHCCCEEEEEEEECC
DSLGCRIRVNGEVREEQVVNHTGAAVACTVTAA
CCCEEEEEECCCCCHHHHHCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 12788972 [H]