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The map label for this gene is 169627576

Identifier: 169627576

GI number: 169627576

Start: 469659

End: 470243

Strand: Direct

Name: 169627576

Synonym: MAB_0472

Alternate gene names: NA

Gene position: 469659-470243 (Clockwise)

Preceding gene: 169627575

Following gene: 169627577

Centisome position: 9.27

GC content: 66.67

Gene sequence:

>585_bases
GTGATCGCCGCGCTGCTGATGCTTGCCGCGGCGGTCTTGACCGCGCCCGGGGCATTGCGGGCCCGGGCGAGGATGTCACC
CCATCGGCTTCCTGCTTCTTTCGAGCGGGACGACATCGAAAAGGGTTTGTTGGGAATGGCATTCAGCCTCGACATGTTCG
GTGTGTGTCTGCGGTCCGGGATGCCCGTCGCGACCGCGGCACTGGTGGTGGCTGCCGCGGCACCGGTGGAGCTGGCCCGA
ATCCTCCGTCGAGCGGGGGAGATGCTTGCGCTGGGTGCACCGGCATCGACGGCATGGATGGACGCGGGCTCACCCGATGA
TCCGGGATACGAACAGCGCCAGGCGCTGACCAGACTGGCGCGGCGATCCGCCGACTCGGGAGTGGTCATGGCCGACGGCA
TCGCCTCATTGGCGGTGCAATGTCGTCGAGACGCGCTGGATTCCGCGGTGGCGACCGCGGAACGAGCCGGTGTGCTCATC
GGGGCGCCACTGGGGCTGTGCTTTCTGCCATCTTTCATCTGCCTGGGCATCGTGCCTGTCGTCATGGGCTTGGCACGCGA
TGTGTTCCACAGCGGTGTGCTGTGA

Upstream 100 bases:

>100_bases
TGTGCGCGGGTGGCGTGGGCGGCGCGTTGCTCGTTGTAGGGGTGACGCTGGCGTGTGCCGGCCTGCTGTGGGCCGACGCG
ATCACCGGGAAGGCGTTGCG

Downstream 100 bases:

>100_bases
CCTGCGGAGGGGCCGCAGGCCAACAAGGGAGGGAATCCATTGATACACAACGGTATGTTGACCAAGGTGCGTCGGCGGCT
CGTGGTAGTCGTCGAGTCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Type II Secretion System F Domain-Containing Protein; Type II Secretion System Protein F; Type II Secretion System F Domain Protein; Conserved Alanine Rich Membrane Protein; Alanine Rich Membrane Protein; Flp Pilus Assembly Protein TadC; Type II Secretion System Integral Membrane Subunit

Number of amino acids: Translated: 194; Mature: 194

Protein sequence:

>194_residues
MIAALLMLAAAVLTAPGALRARARMSPHRLPASFERDDIEKGLLGMAFSLDMFGVCLRSGMPVATAALVVAAAAPVELAR
ILRRAGEMLALGAPASTAWMDAGSPDDPGYEQRQALTRLARRSADSGVVMADGIASLAVQCRRDALDSAVATAERAGVLI
GAPLGLCFLPSFICLGIVPVVMGLARDVFHSGVL

Sequences:

>Translated_194_residues
MIAALLMLAAAVLTAPGALRARARMSPHRLPASFERDDIEKGLLGMAFSLDMFGVCLRSGMPVATAALVVAAAAPVELAR
ILRRAGEMLALGAPASTAWMDAGSPDDPGYEQRQALTRLARRSADSGVVMADGIASLAVQCRRDALDSAVATAERAGVLI
GAPLGLCFLPSFICLGIVPVVMGLARDVFHSGVL
>Mature_194_residues
MIAALLMLAAAVLTAPGALRARARMSPHRLPASFERDDIEKGLLGMAFSLDMFGVCLRSGMPVATAALVVAAAAPVELAR
ILRRAGEMLALGAPASTAWMDAGSPDDPGYEQRQALTRLARRSADSGVVMADGIASLAVQCRRDALDSAVATAERAGVLI
GAPLGLCFLPSFICLGIVPVVMGLARDVFHSGVL

Specific function: Unknown

COG id: COG2064

COG function: function code NU; Flp pilus assembly protein TadC

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20068; Mature: 20068

Theoretical pI: Translated: 7.95; Mature: 7.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIAALLMLAAAVLTAPGALRARARMSPHRLPASFERDDIEKGLLGMAFSLDMFGVCLRSG
CHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
MPVATAALVVAAAAPVELARILRRAGEMLALGAPASTAWMDAGSPDDPGYEQRQALTRLA
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHH
RRSADSGVVMADGIASLAVQCRRDALDSAVATAERAGVLIGAPLGLCFLPSFICLGIVPV
HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHH
VMGLARDVFHSGVL
HHHHHHHHHHHCCC
>Mature Secondary Structure
MIAALLMLAAAVLTAPGALRARARMSPHRLPASFERDDIEKGLLGMAFSLDMFGVCLRSG
CHHHHHHHHHHHHHCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCC
MPVATAALVVAAAAPVELARILRRAGEMLALGAPASTAWMDAGSPDDPGYEQRQALTRLA
CCHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCCHHHCCCCCCCCCCHHHHHHHHHHH
RRSADSGVVMADGIASLAVQCRRDALDSAVATAERAGVLIGAPLGLCFLPSFICLGIVPV
HHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHH
VMGLARDVFHSGVL
HHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA