| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is yceL [C]
Identifier: 169627554
GI number: 169627554
Start: 453419
End: 454726
Strand: Reverse
Name: yceL [C]
Synonym: MAB_0450c
Alternate gene names: 169627554
Gene position: 454726-453419 (Counterclockwise)
Preceding gene: 169627555
Following gene: 169627552
Centisome position: 8.97
GC content: 64.37
Gene sequence:
>1308_bases GTGACCGATGCGCACCTGAGAGCACCCGGAACTGGCCAGACCGTGTTTGGCCAGTTCCGGTCTTTCGATCGGCCCAGCCA GATATTGATGGTGAACCAGTTCGCCATCAATGTCGGCTTCTACATGCTGATGCCGTATCTCGCCGGATATCTGGCCGGGC CCTTGGGCTTGGCCGCGTGGATGGTGGGACTGGTGCTCGGGGTCCGCAACTTCTCTCAGCAGGGCATGTTTCTGGTTGGT GGCACGCTGGCCGACAGGTTCGGGTACAAGCCGCTGATTGTCGCCGGATGCTTCTTGCGGACCGCCGGATTTGCGATGCT GGCGTTCGTCGGTACTCTTCCGGCGATATTGATCGCCTCGGCGGCAACGGGTTTCGCCGGTGCTCTCTTCAACCCGGCGG TGCGTGCCTACCTGGCCGCCGACTCCGGTGAGCGCCGGGTAGAGGCCTTCGCGGTGTTCAACGTCTTCTACCAGGCGGGC ATCCTTTTCGGACCGATCGTCGGCTTGGCGTTGACGGCCTGGGACTTCCGGATCACCTGCGCTGTCGCCGCGGCGGTTTT CGCATTCCTGACGGTGATTCAGTTGATGGCGTTGCCGCCGAACCGGGCAGAGTCGGAGCGCAACGCCGACCGTGCTCCGG TGCTGACCAGCTGGCGTTCGGTGGTGTCCAACAAGGCCTTCCTGTTGTTCTCGGGAGCCATGATCGGTTCGTATGTGCTG ACGTTCCAGGTGTACCTCGCACTTCCGCTGCAGGCGGCGCTGCTCACCGACGACAAGAAATCCGAAACAGCGTTGGTGAC AAGCATCTTCGTGGTGTCGGGGCTGGTGGCCATCGCGGGTCAGGTGCGCCTGACCGGCTGGCTTTCCGCACGCTTTGGTC CCAGTCGCAGTCTGGTACTCGGGATGCTGGTCATCGGAACGGCGTTCGTACCGCTGGCGCTGCTGCCCACAGCGGCGTCG GCAGGGCAACTCGCCGCGATCGCCGCGCTGCTGTTCTCGGCGGCGCTGCTGGCCGTGGGGACCATCGCGACTTTTCCCTT CGAGATGGACACCGTGGTCAGGCTGGCCGACAACCGGTTGGTGGCCACCCACTACGGGCTGTACAACACCATCGTCGGTA TCGGCATTCTCGCGGGGAATCTGCTGACCGGCTCGGTGTTCGGCTACAGCCAGCAGCACGGTGTGCCCTCGTTATTGTGG GTGTCACTGGAGGTTGTCGCGCTGGTGTGTGCTGCCGCGCTCTTGGCGTTGCGGCGCGCCGGGCTCCTGGACCCGGGCCG GGCAAGCGGTGTCGGCGGGGACCGATGA
Upstream 100 bases:
>100_bases CGCCGGCGCAAGATCCCGACGTGATTGACGATCCGTCGCAGCGGGTGGTGGACCGATGGACCAGGCTCACCCATGTGATC GACCCGCTCGGACGCACGGC
Downstream 100 bases:
>100_bases GCGCTGCTGCGGTGATCGGCAGGCGGCGCGGCAGCTGCGCGCTAACGCAACCGCTGCCGGGCCGCATGTCGGCGCCGCCG CAGGTGCTGGACCCGTTTAG
Product: ABC transporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MTDAHLRAPGTGQTVFGQFRSFDRPSQILMVNQFAINVGFYMLMPYLAGYLAGPLGLAAWMVGLVLGVRNFSQQGMFLVG GTLADRFGYKPLIVAGCFLRTAGFAMLAFVGTLPAILIASAATGFAGALFNPAVRAYLAADSGERRVEAFAVFNVFYQAG ILFGPIVGLALTAWDFRITCAVAAAVFAFLTVIQLMALPPNRAESERNADRAPVLTSWRSVVSNKAFLLFSGAMIGSYVL TFQVYLALPLQAALLTDDKKSETALVTSIFVVSGLVAIAGQVRLTGWLSARFGPSRSLVLGMLVIGTAFVPLALLPTAAS AGQLAAIAALLFSAALLAVGTIATFPFEMDTVVRLADNRLVATHYGLYNTIVGIGILAGNLLTGSVFGYSQQHGVPSLLW VSLEVVALVCAAALLALRRAGLLDPGRASGVGGDR
Sequences:
>Translated_435_residues MTDAHLRAPGTGQTVFGQFRSFDRPSQILMVNQFAINVGFYMLMPYLAGYLAGPLGLAAWMVGLVLGVRNFSQQGMFLVG GTLADRFGYKPLIVAGCFLRTAGFAMLAFVGTLPAILIASAATGFAGALFNPAVRAYLAADSGERRVEAFAVFNVFYQAG ILFGPIVGLALTAWDFRITCAVAAAVFAFLTVIQLMALPPNRAESERNADRAPVLTSWRSVVSNKAFLLFSGAMIGSYVL TFQVYLALPLQAALLTDDKKSETALVTSIFVVSGLVAIAGQVRLTGWLSARFGPSRSLVLGMLVIGTAFVPLALLPTAAS AGQLAAIAALLFSAALLAVGTIATFPFEMDTVVRLADNRLVATHYGLYNTIVGIGILAGNLLTGSVFGYSQQHGVPSLLW VSLEVVALVCAAALLALRRAGLLDPGRASGVGGDR >Mature_434_residues TDAHLRAPGTGQTVFGQFRSFDRPSQILMVNQFAINVGFYMLMPYLAGYLAGPLGLAAWMVGLVLGVRNFSQQGMFLVGG TLADRFGYKPLIVAGCFLRTAGFAMLAFVGTLPAILIASAATGFAGALFNPAVRAYLAADSGERRVEAFAVFNVFYQAGI LFGPIVGLALTAWDFRITCAVAAAVFAFLTVIQLMALPPNRAESERNADRAPVLTSWRSVVSNKAFLLFSGAMIGSYVLT FQVYLALPLQAALLTDDKKSETALVTSIFVVSGLVAIAGQVRLTGWLSARFGPSRSLVLGMLVIGTAFVPLALLPTAASA GQLAAIAALLFSAALLAVGTIATFPFEMDTVVRLADNRLVATHYGLYNTIVGIGILAGNLLTGSVFGYSQQHGVPSLLWV SLEVVALVCAAALLALRRAGLLDPGRASGVGGDR
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
Organism=Escherichia coli, GI87081828, Length=387, Percent_Identity=25.8397932816537, Blast_Score=127, Evalue=2e-30,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 45700; Mature: 45569
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: PS50850 MFS
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDAHLRAPGTGQTVFGQFRSFDRPSQILMVNQFAINVGFYMLMPYLAGYLAGPLGLAAW CCCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVGLVLGVRNFSQQGMFLVGGTLADRFGYKPLIVAGCFLRTAGFAMLAFVGTLPAILIAS HHHHHHHHHHHCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATGFAGALFNPAVRAYLAADSGERRVEAFAVFNVFYQAGILFGPIVGLALTAWDFRITC HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAAAVFAFLTVIQLMALPPNRAESERNADRAPVLTSWRSVVSNKAFLLFSGAMIGSYVL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHH TFQVYLALPLQAALLTDDKKSETALVTSIFVVSGLVAIAGQVRLTGWLSARFGPSRSLVL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH GMLVIGTAFVPLALLPTAASAGQLAAIAALLFSAALLAVGTIATFPFEMDTVVRLADNRL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEE VATHYGLYNTIVGIGILAGNLLTGSVFGYSQQHGVPSLLWVSLEVVALVCAAALLALRRA EEEHHHHHHHHHHHHHHHHHHHCCHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC GLLDPGRASGVGGDR CCCCCCCCCCCCCCC >Mature Secondary Structure TDAHLRAPGTGQTVFGQFRSFDRPSQILMVNQFAINVGFYMLMPYLAGYLAGPLGLAAW CCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH MVGLVLGVRNFSQQGMFLVGGTLADRFGYKPLIVAGCFLRTAGFAMLAFVGTLPAILIAS HHHHHHHHHHHCCCCEEEECCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AATGFAGALFNPAVRAYLAADSGERRVEAFAVFNVFYQAGILFGPIVGLALTAWDFRITC HHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVAAAVFAFLTVIQLMALPPNRAESERNADRAPVLTSWRSVVSNKAFLLFSGAMIGSYVL HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHCCCEEEEEECHHHHHHHH TFQVYLALPLQAALLTDDKKSETALVTSIFVVSGLVAIAGQVRLTGWLSARFGPSRSLVL HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHH GMLVIGTAFVPLALLPTAASAGQLAAIAALLFSAALLAVGTIATFPFEMDTVVRLADNRL HHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCEE VATHYGLYNTIVGIGILAGNLLTGSVFGYSQQHGVPSLLWVSLEVVALVCAAALLALRRA EEEHHHHHHHHHHHHHHHHHHHCCHHCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHC GLLDPGRASGVGGDR CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]