| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627542
Identifier: 169627542
GI number: 169627542
Start: 439216
End: 439995
Strand: Reverse
Name: 169627542
Synonym: MAB_0438c
Alternate gene names: NA
Gene position: 439995-439216 (Counterclockwise)
Preceding gene: 169627550
Following gene: 169627541
Centisome position: 8.68
GC content: 62.31
Gene sequence:
>780_bases ATGGCAGGCGTCGACGAGGTGAGTGGTTTTAAGCCTCCCTATATGGCATTTCAGACCTTCTGGCGGTTCATCGACGAGCT GTCCGGTCCGGGTCTGCCACCGGTAATCGACCGGTCGCTGATGAGCAGTAAGTCGGGCACCGATCAGGCCAATCTCGTGA CGGCGTTGCGGTCGTTCAATCTCATCAATGACGACAACACCGTCAATGCGACATTCAACGCGTTGGTAACCGCCTCTGGC GAGGAACGCAAGCAACTGCTGCGCGAGCTGGTTCAGACGTACTACCAGCCGCAGTTGGCGGTCTCGGCCCAAAATGGCAC TGAGCAGCAGCTCAACGACAGTTTCCGTAACGGTTACGGCATTGTGGGCGCAGATACGCTGCGCAAATCGGTGACATTCT TTTTGCATGCCTCGCGCGAAGCGGGGATAGCGCTGAGCCAGCATTTCCCGAACACCCGGTCCGGGTCGGGTGCGCCCGGG CAGGCGCGGGCCAAGGCCAGGGCCAAGCCCCGCAAGAAGGCGCCGGCAACCCCTGTCGTACCGCCGGCGCCCCCGCCGAC GGCGAACCCTGCGGTGAACGTGCGGCTACAGACCGGTGGCACCTTGCAGCTGCTCGTTGATGTCAACCCGATCACGCTGG TCGGCGAAGACCGCGAGTTCTTCTTCAAGGTCCTCGATCTACTTACCGAGTACAGCGCGGCGCATCCTCAGACTCCGCCG GCGGCCTCGGCTGCCGACGGTGACGATTCCGGCGACGACAGTGAGGAGAACACCGACTAG
Upstream 100 bases:
>100_bases AAGAAAAATCTTTATGGCATGCCTTGCCGCAAGCGCCTGCGGCAGCGTACTGTCCACAACAGAAACAGGCCAGCCTCACT ATGGCAAGTAGGAGACCGTT
Downstream 100 bases:
>100_bases AGAGACCAAAATGGCGGGACAGGTACGTCAATACCTGCCCCGCCGCGGGCCGCTGCGCAACCCGTCCTACAGACATCAGT GTACGGCCCGCCTTCTGACG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MAGVDEVSGFKPPYMAFQTFWRFIDELSGPGLPPVIDRSLMSSKSGTDQANLVTALRSFNLINDDNTVNATFNALVTASG EERKQLLRELVQTYYQPQLAVSAQNGTEQQLNDSFRNGYGIVGADTLRKSVTFFLHASREAGIALSQHFPNTRSGSGAPG QARAKARAKPRKKAPATPVVPPAPPPTANPAVNVRLQTGGTLQLLVDVNPITLVGEDREFFFKVLDLLTEYSAAHPQTPP AASAADGDDSGDDSEENTD
Sequences:
>Translated_259_residues MAGVDEVSGFKPPYMAFQTFWRFIDELSGPGLPPVIDRSLMSSKSGTDQANLVTALRSFNLINDDNTVNATFNALVTASG EERKQLLRELVQTYYQPQLAVSAQNGTEQQLNDSFRNGYGIVGADTLRKSVTFFLHASREAGIALSQHFPNTRSGSGAPG QARAKARAKPRKKAPATPVVPPAPPPTANPAVNVRLQTGGTLQLLVDVNPITLVGEDREFFFKVLDLLTEYSAAHPQTPP AASAADGDDSGDDSEENTD >Mature_258_residues AGVDEVSGFKPPYMAFQTFWRFIDELSGPGLPPVIDRSLMSSKSGTDQANLVTALRSFNLINDDNTVNATFNALVTASGE ERKQLLRELVQTYYQPQLAVSAQNGTEQQLNDSFRNGYGIVGADTLRKSVTFFLHASREAGIALSQHFPNTRSGSGAPGQ ARAKARAKPRKKAPATPVVPPAPPPTANPAVNVRLQTGGTLQLLVDVNPITLVGEDREFFFKVLDLLTEYSAAHPQTPPA ASAADGDDSGDDSEENTD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27802; Mature: 27671
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVDEVSGFKPPYMAFQTFWRFIDELSGPGLPPVIDRSLMSSKSGTDQANLVTALRSFN CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCC LINDDNTVNATFNALVTASGEERKQLLRELVQTYYQPQLAVSAQNGTEQQLNDSFRNGYG CCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCC IVGADTLRKSVTFFLHASREAGIALSQHFPNTRSGSGAPGQARAKARAKPRKKAPATPVV CCCHHHHHHHHHHEEECCCCCCEEHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC PPAPPPTANPAVNVRLQTGGTLQLLVDVNPITLVGEDREFFFKVLDLLTEYSAAHPQTPP CCCCCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCC AASAADGDDSGDDSEENTD CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure AGVDEVSGFKPPYMAFQTFWRFIDELSGPGLPPVIDRSLMSSKSGTDQANLVTALRSFN CCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHCC LINDDNTVNATFNALVTASGEERKQLLRELVQTYYQPQLAVSAQNGTEQQLNDSFRNGYG CCCCCCCEEEEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHCCCC IVGADTLRKSVTFFLHASREAGIALSQHFPNTRSGSGAPGQARAKARAKPRKKAPATPVV CCCHHHHHHHHHHEEECCCCCCEEHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCC PPAPPPTANPAVNVRLQTGGTLQLLVDVNPITLVGEDREFFFKVLDLLTEYSAAHPQTPP CCCCCCCCCCEEEEEEECCCEEEEEEECCCEEEEECCHHHHHHHHHHHHHHHHCCCCCCC AASAADGDDSGDDSEENTD CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA