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The map label for this gene is dppC [H]

Identifier: 169627532

GI number: 169627532

Start: 428564

End: 429478

Strand: Direct

Name: dppC [H]

Synonym: MAB_0428

Alternate gene names: 169627532

Gene position: 428564-429478 (Clockwise)

Preceding gene: 169627531

Following gene: 169627533

Centisome position: 8.46

GC content: 63.06

Gene sequence:

>915_bases
ATGAGTGATCCCGTAAACACTCCGGGCCCGGTGTCCGGCCCGGACGCCACCGCCGAGTCCCTGGCGGAACAGGCAGACCT
ATGGGGCAACGCCTGGAAGTATCTGCGCCGCAGCGGCTTCTTCATCACCGGGTCGATCCTGCTGACGATCCTGGTGTTGA
TGGCGCTTGCTCCGCAGCTGTTCACCTTTGGCAAGGATCCCCGCGCTTGCGACCTGTACCAGGCGCGCAAGGGGATCAGT
GCGGCCCACTGGTTGGGCACCGATCTGCAGGGCTGTGACTACTACGCCAATGTCGTGTACGGGGCCAGGGTCTCGCTGAC
CATCGGGCTCATCGCAATGGTGGGTGTGTTGATCATCGGTGTCATCGTGGGGGCACTGGCCGGATACTTCGGAGGCATCG
CCGATTCTGCGCTCTCCCGGCTGACCGACGTCTTTTATGGCATTCCAACGATTCTGGGCGGGATGATCCTGCTGTCGGTG
GTGGGGCATCGCACGGTGTGGAGCGTCGCCGGTGCGCTCATCGCCTTCGGCTGGATGACATCGATGCGGTTGGTTCGCTC
CAGCGTGATGAGCATCAAGCAGAGCGACTATGTGCAGGCCGCCATAGCTCTGGGTGCGCCGACATGGCGAATCCTGCTGC
GGCACATACTTCCGAATGCGTTGGCCCCGGTTCTGGTGTACGCCACCATTGCGGTGGGCAGCTTCATCGCGGCGGAAGCC
ACTCTGACCTATATGGGCATCGGGCTGGAGCTGCCTGAGATCTCGTGGGGATTGCAGATCAACGACGGGCAGTCGCGATT
TGCTTCCACGCCGCGGCTGGTCATCGTTCCGGCGTTGTTCCTCTCGGCGGCCGTGCTGGGCTTCATCATGGTCGGCGATG
CCCTTCGCGACGCACTCGACCCCCGGAGAAGGTAG

Upstream 100 bases:

>100_bases
GCCGTAGTGGTGAGCATCCTGACCCTCATTGTGTTTTTCTATATCTTCTTCAATCTCGTCGTCGACATTCTTTACGCGCT
GCTGGATCCGAGGATTCGCT

Downstream 100 bases:

>100_bases
GTGGAGGTGCCCACAAGTGATTCCGTGGTCGACATCACGGGCCTGACTGTCGATTTCGAGGTGGACAAGCAGTGGGTTCC
GGCCGTCAAGGGTGTCTCGT

Product: peptide ABC transporter DppC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 304; Mature: 303

Protein sequence:

>304_residues
MSDPVNTPGPVSGPDATAESLAEQADLWGNAWKYLRRSGFFITGSILLTILVLMALAPQLFTFGKDPRACDLYQARKGIS
AAHWLGTDLQGCDYYANVVYGARVSLTIGLIAMVGVLIIGVIVGALAGYFGGIADSALSRLTDVFYGIPTILGGMILLSV
VGHRTVWSVAGALIAFGWMTSMRLVRSSVMSIKQSDYVQAAIALGAPTWRILLRHILPNALAPVLVYATIAVGSFIAAEA
TLTYMGIGLELPEISWGLQINDGQSRFASTPRLVIVPALFLSAAVLGFIMVGDALRDALDPRRR

Sequences:

>Translated_304_residues
MSDPVNTPGPVSGPDATAESLAEQADLWGNAWKYLRRSGFFITGSILLTILVLMALAPQLFTFGKDPRACDLYQARKGIS
AAHWLGTDLQGCDYYANVVYGARVSLTIGLIAMVGVLIIGVIVGALAGYFGGIADSALSRLTDVFYGIPTILGGMILLSV
VGHRTVWSVAGALIAFGWMTSMRLVRSSVMSIKQSDYVQAAIALGAPTWRILLRHILPNALAPVLVYATIAVGSFIAAEA
TLTYMGIGLELPEISWGLQINDGQSRFASTPRLVIVPALFLSAAVLGFIMVGDALRDALDPRRR
>Mature_303_residues
SDPVNTPGPVSGPDATAESLAEQADLWGNAWKYLRRSGFFITGSILLTILVLMALAPQLFTFGKDPRACDLYQARKGISA
AHWLGTDLQGCDYYANVVYGARVSLTIGLIAMVGVLIIGVIVGALAGYFGGIADSALSRLTDVFYGIPTILGGMILLSVV
GHRTVWSVAGALIAFGWMTSMRLVRSSVMSIKQSDYVQAAIALGAPTWRILLRHILPNALAPVLVYATIAVGSFIAAEAT
LTYMGIGLELPEISWGLQINDGQSRFASTPRLVIVPALFLSAAVLGFIMVGDALRDALDPRRR

Specific function: Part of the binding-protein-dependent transport system for dipeptides; probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=278, Percent_Identity=31.6546762589928, Blast_Score=157, Evalue=6e-40,
Organism=Escherichia coli, GI1787498, Length=294, Percent_Identity=32.9931972789116, Blast_Score=141, Evalue=7e-35,
Organism=Escherichia coli, GI1787760, Length=272, Percent_Identity=32.7205882352941, Blast_Score=140, Evalue=9e-35,
Organism=Escherichia coli, GI1788505, Length=226, Percent_Identity=37.1681415929204, Blast_Score=135, Evalue=4e-33,
Organism=Escherichia coli, GI1789889, Length=237, Percent_Identity=34.1772151898734, Blast_Score=124, Evalue=8e-30,
Organism=Escherichia coli, GI1789964, Length=229, Percent_Identity=36.6812227074236, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1787549, Length=222, Percent_Identity=27.9279279279279, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 32387; Mature: 32256

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCC
>Mature Secondary Structure 
SDPVNTPGPVSGPDATAESLAEQADLWGNAWKYLRRSGFFITGSILLTILVLMALAPQL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHHHHHHHHHHH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CCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9680333 [H]