| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is pbpG [H]
Identifier: 169627512
GI number: 169627512
Start: 408905
End: 411340
Strand: Reverse
Name: pbpG [H]
Synonym: MAB_0408c
Alternate gene names: 169627512
Gene position: 411340-408905 (Counterclockwise)
Preceding gene: 169627514
Following gene: 169627511
Centisome position: 8.12
GC content: 65.35
Gene sequence:
>2436_bases ATGCCAGAGCGGCTGTCCCCCCAGATACCCCCCTCCGTGACCCTCGCGAAGCTCGCGGGCTGCGGACTTGTCGCGGCGGT GATCCTGGCCGGGCTGATGTTCCCCTTCGCGGGTGGATTCGGGCTGGCCTCCAATCGCGCATCCGACGTGGTGGCCAATG GCTCCACTCAGTTGCTTCAGGGTGAGGTGCCCGCCGTCACCACGGTGGAGGACGCCAAGGGCAACAAGATCGCCTATCTG TACACCCAACGACGCTTCGAGGTGTCGGCCGACGAGATCGCCGACACCATGAAGCTGGCCCTGCTGTCCATCGAGGACAA GCGCTTCACCTCACATAACGGCGTCGACTGGAAGGGCACGCTCGGCGGACTGGCCGGATACGCCTCCGGGGATGAGGACA CCCGCGGCGGTTCGACCATCGAGCAGCAGTACGTGAAGAACTACCAGCTGCTGGTGGTGGCCAAGACGGACGCCGAGCGC AAGGCCGCCATCGAGACCACTCCCGCCCGCAAGTTACGCGAGATCCGGATGGCGCTGCGGCTGGACCAGACCTTCACCAA GCAGGAAATCCTGACCCGGTACCTGAACCTGGTGTCCTTCGGTAACAACTCGTTCGGCGTGCAGGATGCCGCACAGACCT ATTTCGGCGTCGACGCGAAGGACCTGAACTGGCAGCAGGCCGCGTTGTTGGCGGGCATGGTGCAGTCCACCTCCGGGCTC AATCCCTACGTCAACCCCGAACGCGCCCTGGCCCGGCGGAACCTGGTGCTCGACACCATGATCGCCAACTCTCCCGATAA GAAGGGCGAGCTGCTGGCCGCCAAGGCACAGCCCCTCGGCGTGTTGCCCCAGCCCAACGAGCTGCCGCGCGGCTGCATCG CCGCTGGTGACCGCGCATTCTTCTGCGATTACGTGCTCGACTACCTGGCCAAGTCCGGCATCAGCAAGGACCAGGTGATG AAGGGCGGATACCTCATCCGCACCACCCTGGACCCGGATGTGCAGAACTCGGTGAAGCAGGCGGTCTCGCATGTCGCCGA TCCCGGCCTCAATGGCATCGCCAACGTCATGAGCGTCATCAAGCCGGGACAGACCAGCCACCCCATCTTGGCGATGGCTT CCAGCCGCACCTACGGTCTGGACGGAAACGCCTTCCAAACCATGCAGCCGCAGCCCTTCTCCCTGGTCGGTGACGGTGCC GGGTCGATCTTCAAGATCTTCACGGTTGCCGCGGCCATGGATATGGGCATGGGCATCAACACCGTGCTCGACGTGCCGCC CACCTTCGCGGCCAAGGGCCTGGGCAGCAGCGACGGCTCCAAGGGCTGCCCCAAGGACAACTGGTGCGTCAAGAACGTCG GCAACTACCGCTCCCCGATGAGCGTCACCGACGCCCTCGCGACCTCCCCGAACACCGCGTTCGCCAAGCTGATTCAGTCG ATCGGCGTGTCCAAGGCGGTCGATATGGCCGTGAAGTTGGGGATGCGCTCCTATGCGGAGCCGGGTACCGCCAAGCCGTA TGACCCCGAAGGCGACGAAAGCCTGGCCGAATACATCAAGAAGTACAACCTGGGATCGTTCACCCTCGGCCCGATTCAGA TCAACCCGCTCGAGCTGTCCAACGTGGCGGCCACCTTGGCCTCCGGCGGCAAGTGGTGCCCGCCGAACCCCATCGACAAG GTCTTCGATCGTCACGGCAAGGAAGTACCGACGACGGTCGAGGCCTGTGAGCAGGTGGTGCCTACCGGGCTGGCCAACAC CCTGGCCAACGCCCTGAGCAAGGACGATCAACCCGGCGGTACTGCCGCCGGTTCGGCCGGATCGGTCGGATGGAACCTGC CGCTGTCCAGCAAGACCGGTACCACCGAGGCGCACCGCTCATCGGCGTTCCTGGGGTACACCAACAACCTGGCCGGGGCG AGCTACATCTACGACGACTCGACCACCCCGGGCGATCTGTGCTCGTTCCCGCTGCGCAAGTGCGGCGACGGAAATCTGTA CGGCGGTAATGAGCCCGCGCGCGCCTGGTTCGAGGCGATGAAGCCGATCGCCGACAACTACGGCCCGACGGTGCTGCCGC CCACCGAACCCCGATACGTCGAAGGCGGCCCGGGATCGAAGGTGCCCAGCATCAACGGTCTGCGCGAGCCCGAGGCGCGT GACGTTCTCAAGAAGGCGGGCTTCAGGGTGGCCGATCAGGCCAGCTCGGTGAACAGCACGGCACCGTTCAACGAGGTCGT GGGCACCAGCCCGTCCGGGACCACCATTCCTGGCTCCGTGATCACCATCCTGATGAGCAATGGCATCCCGCCGGCGCCAC CACCCCTTGTCATTCCGGGTATCCCCGGCGCTCCGCCTGGCGAGATGACCACCACGATCGTCAACATCCCGGGCCTGCCG CCCATCACCGTGCCGGTGCTGGCGCCACCCCCGTGA
Upstream 100 bases:
>100_bases CGGTTGTGCCGACAACGTCTTTTCATCGCCCCGAGCGAGCCCCGTGTTACCAATCAACTACCCCGCAGACACCTCTGGGG ATGCCACGTACCCTGTGCCT
Downstream 100 bases:
>100_bases TCTAGCTCTCGGTCGTCGCACCAGGCTGCTCATCCGTGACGAGAAATGCGCCACGTTTTGTGCAGGTGATCCGGGGTCCC TCAGCATTCGGAGTTACCCT
Product: bifunctional membrane-associated penicillin-binding protein PonA2/glycosyl transferase
Products: NA
Alternate protein names: PBP-2D; PBP2d [H]
Number of amino acids: Translated: 811; Mature: 810
Protein sequence:
>811_residues MPERLSPQIPPSVTLAKLAGCGLVAAVILAGLMFPFAGGFGLASNRASDVVANGSTQLLQGEVPAVTTVEDAKGNKIAYL YTQRRFEVSADEIADTMKLALLSIEDKRFTSHNGVDWKGTLGGLAGYASGDEDTRGGSTIEQQYVKNYQLLVVAKTDAER KAAIETTPARKLREIRMALRLDQTFTKQEILTRYLNLVSFGNNSFGVQDAAQTYFGVDAKDLNWQQAALLAGMVQSTSGL NPYVNPERALARRNLVLDTMIANSPDKKGELLAAKAQPLGVLPQPNELPRGCIAAGDRAFFCDYVLDYLAKSGISKDQVM KGGYLIRTTLDPDVQNSVKQAVSHVADPGLNGIANVMSVIKPGQTSHPILAMASSRTYGLDGNAFQTMQPQPFSLVGDGA GSIFKIFTVAAAMDMGMGINTVLDVPPTFAAKGLGSSDGSKGCPKDNWCVKNVGNYRSPMSVTDALATSPNTAFAKLIQS IGVSKAVDMAVKLGMRSYAEPGTAKPYDPEGDESLAEYIKKYNLGSFTLGPIQINPLELSNVAATLASGGKWCPPNPIDK VFDRHGKEVPTTVEACEQVVPTGLANTLANALSKDDQPGGTAAGSAGSVGWNLPLSSKTGTTEAHRSSAFLGYTNNLAGA SYIYDDSTTPGDLCSFPLRKCGDGNLYGGNEPARAWFEAMKPIADNYGPTVLPPTEPRYVEGGPGSKVPSINGLREPEAR DVLKKAGFRVADQASSVNSTAPFNEVVGTSPSGTTIPGSVITILMSNGIPPAPPPLVIPGIPGAPPGEMTTTIVNIPGLP PITVPVLAPPP
Sequences:
>Translated_811_residues MPERLSPQIPPSVTLAKLAGCGLVAAVILAGLMFPFAGGFGLASNRASDVVANGSTQLLQGEVPAVTTVEDAKGNKIAYL YTQRRFEVSADEIADTMKLALLSIEDKRFTSHNGVDWKGTLGGLAGYASGDEDTRGGSTIEQQYVKNYQLLVVAKTDAER KAAIETTPARKLREIRMALRLDQTFTKQEILTRYLNLVSFGNNSFGVQDAAQTYFGVDAKDLNWQQAALLAGMVQSTSGL NPYVNPERALARRNLVLDTMIANSPDKKGELLAAKAQPLGVLPQPNELPRGCIAAGDRAFFCDYVLDYLAKSGISKDQVM KGGYLIRTTLDPDVQNSVKQAVSHVADPGLNGIANVMSVIKPGQTSHPILAMASSRTYGLDGNAFQTMQPQPFSLVGDGA GSIFKIFTVAAAMDMGMGINTVLDVPPTFAAKGLGSSDGSKGCPKDNWCVKNVGNYRSPMSVTDALATSPNTAFAKLIQS IGVSKAVDMAVKLGMRSYAEPGTAKPYDPEGDESLAEYIKKYNLGSFTLGPIQINPLELSNVAATLASGGKWCPPNPIDK VFDRHGKEVPTTVEACEQVVPTGLANTLANALSKDDQPGGTAAGSAGSVGWNLPLSSKTGTTEAHRSSAFLGYTNNLAGA SYIYDDSTTPGDLCSFPLRKCGDGNLYGGNEPARAWFEAMKPIADNYGPTVLPPTEPRYVEGGPGSKVPSINGLREPEAR DVLKKAGFRVADQASSVNSTAPFNEVVGTSPSGTTIPGSVITILMSNGIPPAPPPLVIPGIPGAPPGEMTTTIVNIPGLP PITVPVLAPPP >Mature_810_residues PERLSPQIPPSVTLAKLAGCGLVAAVILAGLMFPFAGGFGLASNRASDVVANGSTQLLQGEVPAVTTVEDAKGNKIAYLY TQRRFEVSADEIADTMKLALLSIEDKRFTSHNGVDWKGTLGGLAGYASGDEDTRGGSTIEQQYVKNYQLLVVAKTDAERK AAIETTPARKLREIRMALRLDQTFTKQEILTRYLNLVSFGNNSFGVQDAAQTYFGVDAKDLNWQQAALLAGMVQSTSGLN PYVNPERALARRNLVLDTMIANSPDKKGELLAAKAQPLGVLPQPNELPRGCIAAGDRAFFCDYVLDYLAKSGISKDQVMK GGYLIRTTLDPDVQNSVKQAVSHVADPGLNGIANVMSVIKPGQTSHPILAMASSRTYGLDGNAFQTMQPQPFSLVGDGAG SIFKIFTVAAAMDMGMGINTVLDVPPTFAAKGLGSSDGSKGCPKDNWCVKNVGNYRSPMSVTDALATSPNTAFAKLIQSI GVSKAVDMAVKLGMRSYAEPGTAKPYDPEGDESLAEYIKKYNLGSFTLGPIQINPLELSNVAATLASGGKWCPPNPIDKV FDRHGKEVPTTVEACEQVVPTGLANTLANALSKDDQPGGTAAGSAGSVGWNLPLSSKTGTTEAHRSSAFLGYTNNLAGAS YIYDDSTTPGDLCSFPLRKCGDGNLYGGNEPARAWFEAMKPIADNYGPTVLPPTEPRYVEGGPGSKVPSINGLREPEARD VLKKAGFRVADQASSVNSTAPFNEVVGTSPSGTTIPGSVITILMSNGIPPAPPPLVIPGIPGAPPGEMTTTIVNIPGLPP ITVPVLAPPP
Specific function: Involved in the polymerization and cross-linking of spore peptidoglycan. May be required for synthesis of the spore germ cell wall, the first layer of peptidoglycan synthesized on the surface of the inner forespore membrane [H]
COG id: COG0744
COG function: function code M; Membrane carboxypeptidase (penicillin-binding protein)
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: In the C-terminal section; belongs to the transpeptidase family [H]
Homologues:
Organism=Escherichia coli, GI87082258, Length=322, Percent_Identity=29.5031055900621, Blast_Score=127, Evalue=2e-30, Organism=Escherichia coli, GI1786343, Length=583, Percent_Identity=25.557461406518, Blast_Score=105, Evalue=1e-23, Organism=Escherichia coli, GI1789601, Length=176, Percent_Identity=35.2272727272727, Blast_Score=83, Evalue=8e-17, Organism=Escherichia coli, GI1788867, Length=200, Percent_Identity=29.5, Blast_Score=82, Evalue=2e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012338 - InterPro: IPR001264 - InterPro: IPR011816 - InterPro: IPR001460 [H]
Pfam domain/function: PF00912 Transgly; PF00905 Transpeptidase [H]
EC number: 2.4.2.-; 3.4.-.- [C]
Molecular weight: Translated: 85281; Mature: 85150
Theoretical pI: Translated: 5.88; Mature: 5.88
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPERLSPQIPPSVTLAKLAGCGLVAAVILAGLMFPFAGGFGLASNRASDVVANGSTQLLQ CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEECCCCCEEE GEVPAVTTVEDAKGNKIAYLYTQRRFEVSADEIADTMKLALLSIEDKRFTSHNGVDWKGT CCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC LGGLAGYASGDEDTRGGSTIEQQYVKNYQLLVVAKTDAERKAAIETTPARKLREIRMALR CCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEEEECCCCHHHHCCCCHHHHHHHHHHHHH LDQTFTKQEILTRYLNLVSFGNNSFGVQDAAQTYFGVDAKDLNWQQAALLAGMVQSTSGL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC NPYVNPERALARRNLVLDTMIANSPDKKGELLAAKAQPLGVLPQPNELPRGCIAAGDRAF CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCHH FCDYVLDYLAKSGISKDQVMKGGYLIRTTLDPDVQNSVKQAVSHVADPGLNGIANVMSVI HHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH KPGQTSHPILAMASSRTYGLDGNAFQTMQPQPFSLVGDGAGSIFKIFTVAAAMDMGMGIN CCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCC TVLDVPPTFAAKGLGSSDGSKGCPKDNWCVKNVGNYRSPMSVTDALATSPNTAFAKLIQS CEECCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHH IGVSKAVDMAVKLGMRSYAEPGTAKPYDPEGDESLAEYIKKYNLGSFTLGPIQINPLELS HCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCEEECCEEHH NVAATLASGGKWCPPNPIDKVFDRHGKEVPTTVEACEQVVPTGLANTLANALSKDDQPGG HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC TAAGSAGSVGWNLPLSSKTGTTEAHRSSAFLGYTNNLAGASYIYDDSTTPGDLCSFPLRK CCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCEEEECCCCCCHHHHHCHHHH CGDGNLYGGNEPARAWFEAMKPIADNYGPTVLPPTEPRYVEGGPGSKVPSINGLREPEAR CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHH DVLKKAGFRVADQASSVNSTAPFNEVVGTSPSGTTIPGSVITILMSNGIPPAPPPLVIPG HHHHHCCCEEHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECC IPGAPPGEMTTTIVNIPGLPPITVPVLAPPP CCCCCCCCCEEEEEECCCCCCCEEECCCCCC >Mature Secondary Structure PERLSPQIPPSVTLAKLAGCGLVAAVILAGLMFPFAGGFGLASNRASDVVANGSTQLLQ CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHEECCCCCEEE GEVPAVTTVEDAKGNKIAYLYTQRRFEVSADEIADTMKLALLSIEDKRFTSHNGVDWKGT CCCCEEEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHEECCCCCCCCCCCCCCCC LGGLAGYASGDEDTRGGSTIEQQYVKNYQLLVVAKTDAERKAAIETTPARKLREIRMALR CCCCCCCCCCCCCCCCCCHHHHHHHCCEEEEEEEECCCCHHHHCCCCHHHHHHHHHHHHH LDQTFTKQEILTRYLNLVSFGNNSFGVQDAAQTYFGVDAKDLNWQQAALLAGMVQSTSGL HHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHHHHCCCC NPYVNPERALARRNLVLDTMIANSPDKKGELLAAKAQPLGVLPQPNELPRGCIAAGDRAF CCCCCHHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCCCCCCCHHHHCCCCHH FCDYVLDYLAKSGISKDQVMKGGYLIRTTLDPDVQNSVKQAVSHVADPGLNGIANVMSVI HHHHHHHHHHHCCCCHHHHHCCCEEEEEECCCHHHHHHHHHHHHHCCCCCHHHHHHHHHH KPGQTSHPILAMASSRTYGLDGNAFQTMQPQPFSLVGDGAGSIFKIFTVAAAMDMGMGIN CCCCCCCCEEEEECCCEECCCCCCCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHCCCCC TVLDVPPTFAAKGLGSSDGSKGCPKDNWCVKNVGNYRSPMSVTDALATSPNTAFAKLIQS CEECCCCHHHHCCCCCCCCCCCCCCCCCHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHH IGVSKAVDMAVKLGMRSYAEPGTAKPYDPEGDESLAEYIKKYNLGSFTLGPIQINPLELS HCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCCEEECCEEECCEEHH NVAATLASGGKWCPPNPIDKVFDRHGKEVPTTVEACEQVVPTGLANTLANALSKDDQPGG HHHHHHHCCCCCCCCCHHHHHHHHCCCCCCHHHHHHHHHHCCHHHHHHHHHHCCCCCCCC TAAGSAGSVGWNLPLSSKTGTTEAHRSSAFLGYTNNLAGASYIYDDSTTPGDLCSFPLRK CCCCCCCCCCCCCCCCCCCCCCHHHHCCEEEEECCCCCCCEEEECCCCCCHHHHHCHHHH CGDGNLYGGNEPARAWFEAMKPIADNYGPTVLPPTEPRYVEGGPGSKVPSINGLREPEAR CCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECCCCCCCCCCCCCCCCHHH DVLKKAGFRVADQASSVNSTAPFNEVVGTSPSGTTIPGSVITILMSNGIPPAPPPLVIPG HHHHHCCCEEHHHHCCCCCCCCHHHHHCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEECC IPGAPPGEMTTTIVNIPGLPPITVPVLAPPP CCCCCCCCCEEEEEECCCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Aminoacyltransferases [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377 [H]