| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627507
Identifier: 169627507
GI number: 169627507
Start: 404240
End: 404734
Strand: Direct
Name: 169627507
Synonym: MAB_0403
Alternate gene names: NA
Gene position: 404240-404734 (Clockwise)
Preceding gene: 169627506
Following gene: 169627513
Centisome position: 7.98
GC content: 68.48
Gene sequence:
>495_bases ATGACGCGGTTCGTGTTGTTCGCCGGAATTACCTTGGCGGCGTGTGTTTTTGCGGGCTGCGGTGCCGCCCCGAACTCGAC CTCGAATTCGATACGGCAGACGTCCACGCCGGCAGCAGCGGCCTCGCCGGGCCGGGCCGAGCCGTCGCGTCGGGTGGTGC CGCCGGGTGGCGTCTACTGGAACCCGGTGACGCAGCAGCCCGAGGTCAAGCCCGTCGAGATTGTGCTGACCCCCGCCGAC GCCGGAGACATGCTCGTCGACATCACCTGGGACAGCTGGACTGAGCAGCAGGCCGGCGGGCACGCCATCCGCGCCACGAA GGACTGCGTGCCCGATTGCGCGACGGGCGGGACAACCCGGCGGGACGTGACACTGACCTTCCACGACGCGCGGTCGCTTC CCGACGACAGCGGATGGTGGCAGTACACCAAGCTGGTCATCACCGGCCGTGACGGCACATCAGAGACCATCGACATGCCG GTGACGGCGCGGTAG
Upstream 100 bases:
>100_bases CTACCTGGCCGACAAGATCGCCCCGCTCATCGGTACCCGGCTGACCCGCAGGCTCTGAGCTGGACAACGACTGTAGCCAA TTCGCGGGTACGGTCTGAAC
Downstream 100 bases:
>100_bases CGCTAGCTCGCGATGACGTCCAGGGTGCCGAACAGGGTGAGCCCCGCAATGGGCGCCAGCGCGCTTGATGCCGCGTTATC CAACTGGCAGCGGTACTGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 164; Mature: 163
Protein sequence:
>164_residues MTRFVLFAGITLAACVFAGCGAAPNSTSNSIRQTSTPAAAASPGRAEPSRRVVPPGGVYWNPVTQQPEVKPVEIVLTPAD AGDMLVDITWDSWTEQQAGGHAIRATKDCVPDCATGGTTRRDVTLTFHDARSLPDDSGWWQYTKLVITGRDGTSETIDMP VTAR
Sequences:
>Translated_164_residues MTRFVLFAGITLAACVFAGCGAAPNSTSNSIRQTSTPAAAASPGRAEPSRRVVPPGGVYWNPVTQQPEVKPVEIVLTPAD AGDMLVDITWDSWTEQQAGGHAIRATKDCVPDCATGGTTRRDVTLTFHDARSLPDDSGWWQYTKLVITGRDGTSETIDMP VTAR >Mature_163_residues TRFVLFAGITLAACVFAGCGAAPNSTSNSIRQTSTPAAAASPGRAEPSRRVVPPGGVYWNPVTQQPEVKPVEIVLTPADA GDMLVDITWDSWTEQQAGGHAIRATKDCVPDCATGGTTRRDVTLTFHDARSLPDDSGWWQYTKLVITGRDGTSETIDMPV TAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17462; Mature: 17330
Theoretical pI: Translated: 5.15; Mature: 5.15
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRFVLFAGITLAACVFAGCGAAPNSTSNSIRQTSTPAAAASPGRAEPSRRVVPPGGVYW CCEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEE NPVTQQPEVKPVEIVLTPADAGDMLVDITWDSWTEQQAGGHAIRATKDCVPDCATGGTTR CCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCC RDVTLTFHDARSLPDDSGWWQYTKLVITGRDGTSETIDMPVTAR EEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEECC >Mature Secondary Structure TRFVLFAGITLAACVFAGCGAAPNSTSNSIRQTSTPAAAASPGRAEPSRRVVPPGGVYW CEEEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCEEE NPVTQQPEVKPVEIVLTPADAGDMLVDITWDSWTEQQAGGHAIRATKDCVPDCATGGTTR CCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCCCCC RDVTLTFHDARSLPDDSGWWQYTKLVITGRDGTSETIDMPVTAR EEEEEEEECCCCCCCCCCCEEEEEEEEECCCCCCCEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA