| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627490
Identifier: 169627490
GI number: 169627490
Start: 381942
End: 382781
Strand: Reverse
Name: 169627490
Synonym: MAB_0386c
Alternate gene names: NA
Gene position: 382781-381942 (Counterclockwise)
Preceding gene: 169627492
Following gene: 169627487
Centisome position: 7.55
GC content: 67.5
Gene sequence:
>840_bases ATGTCGGAGTTGGTGACGGGCGATGCGGTTGTCCTGGACGTCAAGGTGGCCCAGCTTCCGGTGCGAGTGGTGTCCGCGTT CATCGACATCTTTGTCCAGATGATCGTGCTGTACGGCGGCATCTTCGTGGTCGCGTTCTCGCTCTCTCAGTTCGACGCGG CCCTGACCGGTGCGCTGAGCATCGTCTATTCGGTGCTGGCCCTGGTGGGCTATCCGGTTATTTGGGAAATGGCCACCCGG GGCCGCTCACTGGGCAAGATGGCCATGGGGTTACGCGTGGTGTCCGACGACGGTGGCCCGGAGCGCCTGCGGCAGGCCGT CATCCGTGCCCTGTCCGCCGTGGTGGAGATTTTCATGTTCATGGGTGCGCCGGCGGTCATCGCCAGCCTGGCCTCGACCA AGGGCAAGCGGCTCGGCGACATCTTCGCGGGCACCATGGTGATCAGCGAGCGCGGCCCCAAACTTCCTCCGCCGCCGATG ATGCCGCCGCAGCTGGCCCAGTGGGCTCAGAGCCTGCAGCTGTCCGGGCTGACGAGCGACCAGGCCGATCTGGCCCGTCA GTTCCTCAACCGCGCGGGGCAGTTGGCACCGCACACTCGAGACCAGATGCTCTACCAGATCTCCACCGACGTGCTCGCCA GCATCGCGCCGCCACCGCCGCCCGGCACGCCGCCTCAGTTCATGCTCGCCGCGGTGCTGGCCGAGCGGCACCGACGCGCG TTGGCACAGATGCGACCGGACTATCCGGCGACACCACCACCGGCGCCCTCCGCACCACCACCGGCACCGGAGCCTTCCGA ATCGTCCACGGGACGTTCGGGTTTCGCCACGCCCGGCTGA
Upstream 100 bases:
>100_bases TGCCTGCGCTTGAGCAGCTCTTCCAACCGATCCCATGTCCCCCGGTGGGTGGCGACGAATGCGTCCACGTCCATCTGGCA AATACTAGTAGTCTCGAGTG
Downstream 100 bases:
>100_bases TTGCCCTGGGACGTCTTCGCATACAGCGAGCCACCGACCGTCGCCGCGGCAATCGTGACCAACGCACCGAGAATGAGCGC GGAAGCCTCGCCGTGAATCA
Product: hypothetical protein
Products: NA
Alternate protein names: Integral Membrane Protein; RDD Domain-Containing Protein; RDD Family Protein; RDD Family Domain-Containing Protein; Transmembrane Protein; Conserved Membrane Protein; TransRDD Family Protein
Number of amino acids: Translated: 279; Mature: 278
Protein sequence:
>279_residues MSELVTGDAVVLDVKVAQLPVRVVSAFIDIFVQMIVLYGGIFVVAFSLSQFDAALTGALSIVYSVLALVGYPVIWEMATR GRSLGKMAMGLRVVSDDGGPERLRQAVIRALSAVVEIFMFMGAPAVIASLASTKGKRLGDIFAGTMVISERGPKLPPPPM MPPQLAQWAQSLQLSGLTSDQADLARQFLNRAGQLAPHTRDQMLYQISTDVLASIAPPPPPGTPPQFMLAAVLAERHRRA LAQMRPDYPATPPPAPSAPPPAPEPSESSTGRSGFATPG
Sequences:
>Translated_279_residues MSELVTGDAVVLDVKVAQLPVRVVSAFIDIFVQMIVLYGGIFVVAFSLSQFDAALTGALSIVYSVLALVGYPVIWEMATR GRSLGKMAMGLRVVSDDGGPERLRQAVIRALSAVVEIFMFMGAPAVIASLASTKGKRLGDIFAGTMVISERGPKLPPPPM MPPQLAQWAQSLQLSGLTSDQADLARQFLNRAGQLAPHTRDQMLYQISTDVLASIAPPPPPGTPPQFMLAAVLAERHRRA LAQMRPDYPATPPPAPSAPPPAPEPSESSTGRSGFATPG >Mature_278_residues SELVTGDAVVLDVKVAQLPVRVVSAFIDIFVQMIVLYGGIFVVAFSLSQFDAALTGALSIVYSVLALVGYPVIWEMATRG RSLGKMAMGLRVVSDDGGPERLRQAVIRALSAVVEIFMFMGAPAVIASLASTKGKRLGDIFAGTMVISERGPKLPPPPMM PPQLAQWAQSLQLSGLTSDQADLARQFLNRAGQLAPHTRDQMLYQISTDVLASIAPPPPPGTPPQFMLAAVLAERHRRAL AQMRPDYPATPPPAPSAPPPAPEPSESSTGRSGFATPG
Specific function: Unknown
COG id: COG1714
COG function: function code S; Predicted membrane protein/domain
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29566; Mature: 29435
Theoretical pI: Translated: 9.44; Mature: 9.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.3 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSELVTGDAVVLDVKVAQLPVRVVSAFIDIFVQMIVLYGGIFVVAFSLSQFDAALTGALS CCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVYSVLALVGYPVIWEMATRGRSLGKMAMGLRVVSDDGGPERLRQAVIRALSAVVEIFMF HHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH MGAPAVIASLASTKGKRLGDIFAGTMVISERGPKLPPPPMMPPQLAQWAQSLQLSGLTSD HCCHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCH QADLARQFLNRAGQLAPHTRDQMLYQISTDVLASIAPPPPPGTPPQFMLAAVLAERHRRA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH LAQMRPDYPATPPPAPSAPPPAPEPSESSTGRSGFATPG HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SELVTGDAVVLDVKVAQLPVRVVSAFIDIFVQMIVLYGGIFVVAFSLSQFDAALTGALS CCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVYSVLALVGYPVIWEMATRGRSLGKMAMGLRVVSDDGGPERLRQAVIRALSAVVEIFMF HHHHHHHHHCCHHHHHHHHCCHHHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHH MGAPAVIASLASTKGKRLGDIFAGTMVISERGPKLPPPPMMPPQLAQWAQSLQLSGLTSD HCCHHHHHHHHHHCCCHHHHHHHHHHHEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCCH QADLARQFLNRAGQLAPHTRDQMLYQISTDVLASIAPPPPPGTPPQFMLAAVLAERHRRA HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH LAQMRPDYPATPPPAPSAPPPAPEPSESSTGRSGFATPG HHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA