| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627461
Identifier: 169627461
GI number: 169627461
Start: 354629
End: 355198
Strand: Reverse
Name: 169627461
Synonym: MAB_0357c
Alternate gene names: NA
Gene position: 355198-354629 (Counterclockwise)
Preceding gene: 169627466
Following gene: 169627460
Centisome position: 7.01
GC content: 63.33
Gene sequence:
>570_bases GTGTCACAGTCCCGAATCGATGACGTTGTCGCAGGCGCCCTGACGTGGACCGAGGTGGACCTCGTCAACATCGACGATTC GTCTTCCCGGCCACTACGGGATGCGCTGGAGGAGTTCGGGATCAGGGTGCATTACCACCCGGTCGGACAACCCCGCCACA TCGTCACTGCGCTAGGAAGCGACCGAACTGTCGCCCCATTTGTGGTCCTTGGCTGCCACGGCGACGAAGGCCGGATCCTG CTCCCCGAGCTCGGCGAGCCGATCGCCTCCGATCAGCCGTTCAATGGATTACTGGGTCCTGACGAAGTACGCCGGCACCT ACGGCTTCCCGGGAGTTTCGTGGTTTCCATCGGATGTGAAACAGGGAGACCCGAACTCGCGGAAGCATTCCTGGACGCAG GTGCGGTCGGCTACTTCGCGCCGCAAGAAGCACCCGATGGGCATGTCGCATTTCTCGTTGCGCTGCTGTTCTTCTACGAG CTGACCGGGGGCATGGCCGCGGTGGAGGCCGCACAGCGGGCGCGTAGATATGACGCCGCCACACACATGTGGCGGCTGTG GTCCCGCTAG
Upstream 100 bases:
>100_bases CACGGATTGCCAAGAAGTGCTCTATCGCACTGTCTTTCGGCGGAATCCCCCAGATAAAACTCGGTGGCCGGCTTACAAAT CGGCGTTTAGGCTGCCACCC
Downstream 100 bases:
>100_bases TCGGGTAAGCCCCGCACCCATGCCGCACCGGTGTTGACACCCCGCCTCGAATATTGTTCTATGCGAATGTATGCATTAAT AGAGAGGATGCCCCATGGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSQSRIDDVVAGALTWTEVDLVNIDDSSSRPLRDALEEFGIRVHYHPVGQPRHIVTALGSDRTVAPFVVLGCHGDEGRIL LPELGEPIASDQPFNGLLGPDEVRRHLRLPGSFVVSIGCETGRPELAEAFLDAGAVGYFAPQEAPDGHVAFLVALLFFYE LTGGMAAVEAAQRARRYDAATHMWRLWSR
Sequences:
>Translated_189_residues MSQSRIDDVVAGALTWTEVDLVNIDDSSSRPLRDALEEFGIRVHYHPVGQPRHIVTALGSDRTVAPFVVLGCHGDEGRIL LPELGEPIASDQPFNGLLGPDEVRRHLRLPGSFVVSIGCETGRPELAEAFLDAGAVGYFAPQEAPDGHVAFLVALLFFYE LTGGMAAVEAAQRARRYDAATHMWRLWSR >Mature_188_residues SQSRIDDVVAGALTWTEVDLVNIDDSSSRPLRDALEEFGIRVHYHPVGQPRHIVTALGSDRTVAPFVVLGCHGDEGRILL PELGEPIASDQPFNGLLGPDEVRRHLRLPGSFVVSIGCETGRPELAEAFLDAGAVGYFAPQEAPDGHVAFLVALLFFYEL TGGMAAVEAAQRARRYDAATHMWRLWSR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20661; Mature: 20529
Theoretical pI: Translated: 4.87; Mature: 4.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSRIDDVVAGALTWTEVDLVNIDDSSSRPLRDALEEFGIRVHYHPVGQPRHIVTALGS CCCHHHHHHHHHHEEEEEEEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEEECCC DRTVAPFVVLGCHGDEGRILLPELGEPIASDQPFNGLLGPDEVRRHLRLPGSFVVSIGCE CCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCC TGRPELAEAFLDAGAVGYFAPQEAPDGHVAFLVALLFFYELTGGMAAVEAAQRARRYDAA CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH THMWRLWSR HHHHHHHCC >Mature Secondary Structure SQSRIDDVVAGALTWTEVDLVNIDDSSSRPLRDALEEFGIRVHYHPVGQPRHIVTALGS CCHHHHHHHHHHEEEEEEEEEECCCCCCCCHHHHHHHCCCEEEEECCCCCCEEEEECCC DRTVAPFVVLGCHGDEGRILLPELGEPIASDQPFNGLLGPDEVRRHLRLPGSFVVSIGCE CCCCCCEEEEEEECCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCC TGRPELAEAFLDAGAVGYFAPQEAPDGHVAFLVALLFFYELTGGMAAVEAAQRARRYDAA CCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH THMWRLWSR HHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA