| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627428
Identifier: 169627428
GI number: 169627428
Start: 324648
End: 325916
Strand: Reverse
Name: 169627428
Synonym: MAB_0324c
Alternate gene names: NA
Gene position: 325916-324648 (Counterclockwise)
Preceding gene: 169627429
Following gene: 169627427
Centisome position: 6.43
GC content: 68.24
Gene sequence:
>1269_bases ATGCCCATCGAGCATCTATCGCCGCGTGGCCGGATCGCACTCGCCGCAGGCTCCGCCGCGCGGTGGGCATCCCGGATCAG CGGTCGCGGCGCGGGCTCCATGATCGGCGGGCTCATCGCACTCAAGCTGGATGGCTCGGTGCTGGCGCAGCTGGGCCGAG GTCGTCGGACAGTCCTGATAACCGGCACCAACGGCAAGTCCACCACCACCCGGATGACCGCCGCCGCCCTGGCGACCGTG GGGCCAGTGGCAACCAACACCGAGGGCTCCAACATGGACGCCGGTCTGGTTGCCGCCCTGGCCGGGACCCGAGAGGCCGA CGTCGCGGTGCTCGAGGTCGACGAGATGCACGTGCCACACGTCGCCGACGCGGTCAACCCGGCGGTCATCGTGCTCCTCA ATCTCAGCCGGGATCAGCTCGACCGCGTGGGTGAGATCAACAACATCGAACGCACTCTGCGCAAGGGGCTGGCCCGCCAC CGCGATGCGGTGATCGTCGCGAATTGTGATGACGTCTTGATGGCATCGGCCGCCTACGACAGCCCCCACGTGGTCTGGGT GGCGGCGGGCGGCGGCTGGGCCGGCGACTCGGTGAGCTGTCCACGCAGCGGGGAGCTCATCATGCGCGACGGAAACCGTT GGTACAGCACGGGAACCGACTTCGCACGGCCTGATCCGGACTGGTGGTTCGACGACGACCGCATCTACGGCCCCAGCGGA ATCAGCCTGCCGATGTCGCTGACGCTGCCCGGTACCGCGAATCGCGGCAACGCCACGCTGGCGGTCGCCGCCGCCGTTGA ACTCGGCGCCCGTCCGGGTCCGGCCGTCGACGCGGTATCGGCTGTCGACCAGGTGGCGGGCCGCTATCGCAGCATCAACC TCGGCGACCACACCATTCGGCTACTGCTGGCCAAGAATCCGGCCGGCTGGCAGGAGGCCCTGTCGATGGTCGATACCGAC GCCGACGGGCTCGTCATCGCGGTGAACGGCCAAGTGCCCGATGGCGAAGACCTGTCCTGGCTGTGGGATGTCAACTTCGA GCATTTCGCCTGCGACAACGGGGAATCGCCGGTGCCTCCCGTCGTCGCGGCCGGCGAGCGCGGCACCGACTTGGCGGTCC GGCTCACCTACGCCAGCGTTACACACACCCTGCAGCATGACCCGGTCCAGGCCATCAAGGCCTGCCCGCCCGGCAGGGTC GATGTGATCGCGAACTACACGGCCTTTCTGAATCTGAATCGAGCGCTGGCCAAAGGCGGTGCGGCATGA
Upstream 100 bases:
>100_bases GTCGCTACAGAGCGCCGTCGCCTGAGTGCGGCTCGGATCGCCCATGCGGCCCTCCCCTCCAGCCGCACGGGCGATCCATC GCCTCCCATAAACTGCGCGG
Downstream 100 bases:
>100_bases GTGAATCCACTGTCCGCGTAGGCCTGGTCCTCCCCGACGTCATGGGCACCTATGGCGACTCGGGCAACGCCGTCGTACTG CGGCAGCGGTTGCGAATGCG
Product: putative Mur ligase family protein
Products: NA
Alternate protein names: Mur Ligase Family Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase; Ligase; Mur Ligase; UDP-N-Acetylmuramoylalanine-D-Glutamate Ligase; Conserved Domain Protein; Mur Ligase Middle Domain Protein; UDP-N-Acetylmuramyl Tripeptide Synthase-Like Protein; UDP-N-Acetylmuramyl Tripeptide Synthetase MurC; UDP-N-Acetylmuramyl Tripeptide Synthetase Like; Murein Ligase; UDP-N-Acetylmuramoyl-L-Alanyl-D-Glutamate-Lysine Ligase; Mur Ligase Middle Domain-Containing Protein; UDP-N-Acetylmuramyl Peptide Synthetase
Number of amino acids: Translated: 422; Mature: 421
Protein sequence:
>422_residues MPIEHLSPRGRIALAAGSAARWASRISGRGAGSMIGGLIALKLDGSVLAQLGRGRRTVLITGTNGKSTTTRMTAAALATV GPVATNTEGSNMDAGLVAALAGTREADVAVLEVDEMHVPHVADAVNPAVIVLLNLSRDQLDRVGEINNIERTLRKGLARH RDAVIVANCDDVLMASAAYDSPHVVWVAAGGGWAGDSVSCPRSGELIMRDGNRWYSTGTDFARPDPDWWFDDDRIYGPSG ISLPMSLTLPGTANRGNATLAVAAAVELGARPGPAVDAVSAVDQVAGRYRSINLGDHTIRLLLAKNPAGWQEALSMVDTD ADGLVIAVNGQVPDGEDLSWLWDVNFEHFACDNGESPVPPVVAAGERGTDLAVRLTYASVTHTLQHDPVQAIKACPPGRV DVIANYTAFLNLNRALAKGGAA
Sequences:
>Translated_422_residues MPIEHLSPRGRIALAAGSAARWASRISGRGAGSMIGGLIALKLDGSVLAQLGRGRRTVLITGTNGKSTTTRMTAAALATV GPVATNTEGSNMDAGLVAALAGTREADVAVLEVDEMHVPHVADAVNPAVIVLLNLSRDQLDRVGEINNIERTLRKGLARH RDAVIVANCDDVLMASAAYDSPHVVWVAAGGGWAGDSVSCPRSGELIMRDGNRWYSTGTDFARPDPDWWFDDDRIYGPSG ISLPMSLTLPGTANRGNATLAVAAAVELGARPGPAVDAVSAVDQVAGRYRSINLGDHTIRLLLAKNPAGWQEALSMVDTD ADGLVIAVNGQVPDGEDLSWLWDVNFEHFACDNGESPVPPVVAAGERGTDLAVRLTYASVTHTLQHDPVQAIKACPPGRV DVIANYTAFLNLNRALAKGGAA >Mature_421_residues PIEHLSPRGRIALAAGSAARWASRISGRGAGSMIGGLIALKLDGSVLAQLGRGRRTVLITGTNGKSTTTRMTAAALATVG PVATNTEGSNMDAGLVAALAGTREADVAVLEVDEMHVPHVADAVNPAVIVLLNLSRDQLDRVGEINNIERTLRKGLARHR DAVIVANCDDVLMASAAYDSPHVVWVAAGGGWAGDSVSCPRSGELIMRDGNRWYSTGTDFARPDPDWWFDDDRIYGPSGI SLPMSLTLPGTANRGNATLAVAAAVELGARPGPAVDAVSAVDQVAGRYRSINLGDHTIRLLLAKNPAGWQEALSMVDTDA DGLVIAVNGQVPDGEDLSWLWDVNFEHFACDNGESPVPPVVAAGERGTDLAVRLTYASVTHTLQHDPVQAIKACPPGRVD VIANYTAFLNLNRALAKGGAA
Specific function: Unknown
COG id: COG0769
COG function: function code M; UDP-N-acetylmuramyl tripeptide synthase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44175; Mature: 44044
Theoretical pI: Translated: 5.40; Mature: 5.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPIEHLSPRGRIALAAGSAARWASRISGRGAGSMIGGLIALKLDGSVLAQLGRGRRTVLI CCCCCCCCCCCEEEEECCHHHHHHHHCCCCCCHHHCEEEEEEECHHHHHHHCCCCEEEEE TGTNGKSTTTRMTAAALATVGPVATNTEGSNMDAGLVAALAGTREADVAVLEVDEMHVPH ECCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHEEECCCCCCCEEEEEECCCCCCH VADAVNPAVIVLLNLSRDQLDRVGEINNIERTLRKGLARHRDAVIVANCDDVLMASAAYD HHHHCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCHHEEEECCCC SPHVVWVAAGGGWAGDSVSCPRSGELIMRDGNRWYSTGTDFARPDPDWWFDDDRIYGPSG CCCEEEEECCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCEEECCCC ISLPMSLTLPGTANRGNATLAVAAAVELGARPGPAVDAVSAVDQVAGRYRSINLGDHTIR CCCEEEEECCCCCCCCCEEEEEEEEEHHCCCCCCHHHHHHHHHHHHHHEEEECCCCEEEE LLLAKNPAGWQEALSMVDTDADGLVIAVNGQVPDGEDLSWLWDVNFEHFACDNGESPVPP EEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCEEECCCCCCCCCC VVAAGERGTDLAVRLTYASVTHTLQHDPVQAIKACPPGRVDVIANYTAFLNLNRALAKGG EEECCCCCCCEEEEEEEHHHHHHHCCCHHHHHHCCCCCCEEEEEEEEEEEECCHHHHCCC AA CC >Mature Secondary Structure PIEHLSPRGRIALAAGSAARWASRISGRGAGSMIGGLIALKLDGSVLAQLGRGRRTVLI CCCCCCCCCCEEEEECCHHHHHHHHCCCCCCHHHCEEEEEEECHHHHHHHCCCCEEEEE TGTNGKSTTTRMTAAALATVGPVATNTEGSNMDAGLVAALAGTREADVAVLEVDEMHVPH ECCCCCCCHHHHHHHHHHHCCCCEECCCCCCCCCHHHEEECCCCCCCEEEEEECCCCCCH VADAVNPAVIVLLNLSRDQLDRVGEINNIERTLRKGLARHRDAVIVANCDDVLMASAAYD HHHHCCCEEEEEEECCHHHHHHCCCHHHHHHHHHHHHHHCCCEEEEECCCHHEEEECCCC SPHVVWVAAGGGWAGDSVSCPRSGELIMRDGNRWYSTGTDFARPDPDWWFDDDRIYGPSG CCCEEEEECCCCCCCCCCCCCCCCCEEEECCCEEECCCCCCCCCCCCCCCCCCEEECCCC ISLPMSLTLPGTANRGNATLAVAAAVELGARPGPAVDAVSAVDQVAGRYRSINLGDHTIR CCCEEEEECCCCCCCCCEEEEEEEEEHHCCCCCCHHHHHHHHHHHHHHEEEECCCCEEEE LLLAKNPAGWQEALSMVDTDADGLVIAVNGQVPDGEDLSWLWDVNFEHFACDNGESPVPP EEEECCCCCHHHHHHHHCCCCCCEEEEEECCCCCCCCCEEEEECCCCEEECCCCCCCCCC VVAAGERGTDLAVRLTYASVTHTLQHDPVQAIKACPPGRVDVIANYTAFLNLNRALAKGG EEECCCCCCCEEEEEEEHHHHHHHCCCHHHHHHCCCCCCEEEEEEEEEEEECCHHHHCCC AA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA