| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627410
Identifier: 169627410
GI number: 169627410
Start: 307986
End: 308642
Strand: Reverse
Name: 169627410
Synonym: MAB_0306c
Alternate gene names: NA
Gene position: 308642-307986 (Counterclockwise)
Preceding gene: 169627411
Following gene: 169627404
Centisome position: 6.09
GC content: 64.23
Gene sequence:
>657_bases GTGACGCGCATACTGCCCATCGGCGCGATATCCGCTGCGCTGATCATCGTCTCGGCGTGCACCAGCGTCGTGGAGGGCGA GGCGAAGACAGACGGCTCGCCCGGCCTGCCCAACGGCGACCCGGAAAGTCTGCTCCTACCGCGCGAAGACTTTCCGGCCG GTGCCGGCACCTACGAGGTGCTCAAGCAGCCCGGCGACGATGGCCCCAGCGTGAGCCCGGTTGAGTGCAATATTTTCGTC AATCACGACACCGTGCCCTTCGAGCAGGCCGCCGCGCAATACGAGGATGGAGCCATCCGGGTGGACGTGGTGGTCGGCAA GGGCATCACCGACTCGTTCTCGGCACTGGAAGAAAAGGCCGGGCGGTGCAAGTCCGTCACCCTGGATCTCGACGGAGTTG AGGGGACGGGCAGTGTCAAGATGGGGAAGGCTTCCGGGGCCACCGTAGACACGACCGAATCCGTCTTCAGCGGAGGCCTG GGCCTGGGTGGTGAGCAGACCGTCGAAATCACCATCAAGACGCTCACAGCGCATCCGCGCGGCGCCACGGTGACCGTCAA AGTCCTACGCGCCATGGAGCCGTGGTCCAGTGACGATGACAAACTGGCGCTGACACTGCTCAACAAGCAGGTTGCCAAGG TGCAGAACGCACCCTAA
Upstream 100 bases:
>100_bases CCCGAACAAGACACGTTGGTGTTGGATCTACTCAACAAGCAGATCACCAAGGTTCAGAACGCCCCGTAAGCCGGTCTGCA CACAAGTTGGGGGAAGTCCT
Downstream 100 bases:
>100_bases GCGCCACGCTCCAAAAGCTTTTCGGTCGCCGCTAGCAGCGCGCAGGTCGCCAGGCCGTCAACGGCGGCGCCAACTGTCTC CAGCGGCGGAAACGTGGGTG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MTRILPIGAISAALIIVSACTSVVEGEAKTDGSPGLPNGDPESLLLPREDFPAGAGTYEVLKQPGDDGPSVSPVECNIFV NHDTVPFEQAAAQYEDGAIRVDVVVGKGITDSFSALEEKAGRCKSVTLDLDGVEGTGSVKMGKASGATVDTTESVFSGGL GLGGEQTVEITIKTLTAHPRGATVTVKVLRAMEPWSSDDDKLALTLLNKQVAKVQNAP
Sequences:
>Translated_218_residues MTRILPIGAISAALIIVSACTSVVEGEAKTDGSPGLPNGDPESLLLPREDFPAGAGTYEVLKQPGDDGPSVSPVECNIFV NHDTVPFEQAAAQYEDGAIRVDVVVGKGITDSFSALEEKAGRCKSVTLDLDGVEGTGSVKMGKASGATVDTTESVFSGGL GLGGEQTVEITIKTLTAHPRGATVTVKVLRAMEPWSSDDDKLALTLLNKQVAKVQNAP >Mature_217_residues TRILPIGAISAALIIVSACTSVVEGEAKTDGSPGLPNGDPESLLLPREDFPAGAGTYEVLKQPGDDGPSVSPVECNIFVN HDTVPFEQAAAQYEDGAIRVDVVVGKGITDSFSALEEKAGRCKSVTLDLDGVEGTGSVKMGKASGATVDTTESVFSGGLG LGGEQTVEITIKTLTAHPRGATVTVKVLRAMEPWSSDDDKLALTLLNKQVAKVQNAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22508; Mature: 22376
Theoretical pI: Translated: 4.31; Mature: 4.31
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTRILPIGAISAALIIVSACTSVVEGEAKTDGSPGLPNGDPESLLLPREDFPAGAGTYEV CCEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHH LKQPGDDGPSVSPVECNIFVNHDTVPFEQAAAQYEDGAIRVDVVVGKGITDSFSALEEKA HHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHC GRCKSVTLDLDGVEGTGSVKMGKASGATVDTTESVFSGGLGLGGEQTVEITIKTLTAHPR CCCEEEEEEECCCCCCCCEEECCCCCCEEECHHHHHCCCCCCCCCEEEEEEEEEEECCCC GATVTVKVLRAMEPWSSDDDKLALTLLNKQVAKVQNAP CCEEEEEEHHHHCCCCCCCCEEEEEHHHHHHHHHCCCC >Mature Secondary Structure TRILPIGAISAALIIVSACTSVVEGEAKTDGSPGLPNGDPESLLLPREDFPAGAGTYEV CEEECCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCHHHH LKQPGDDGPSVSPVECNIFVNHDTVPFEQAAAQYEDGAIRVDVVVGKGITDSFSALEEKA HHCCCCCCCCCCCEEEEEEECCCCCCHHHHHHHCCCCCEEEEEEECCCCCHHHHHHHHHC GRCKSVTLDLDGVEGTGSVKMGKASGATVDTTESVFSGGLGLGGEQTVEITIKTLTAHPR CCCEEEEEEECCCCCCCCEEECCCCCCEEECHHHHHCCCCCCCCCEEEEEEEEEEECCCC GATVTVKVLRAMEPWSSDDDKLALTLLNKQVAKVQNAP CCEEEEEEHHHHCCCCCCCCEEEEEHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA