| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627397
Identifier: 169627397
GI number: 169627397
Start: 293736
End: 295022
Strand: Reverse
Name: 169627397
Synonym: MAB_0292c
Alternate gene names: NA
Gene position: 295022-293736 (Counterclockwise)
Preceding gene: 169627404
Following gene: 169627389
Centisome position: 5.82
GC content: 67.13
Gene sequence:
>1287_bases ATGACTTCTGCGACCAAGACCCGGGCCGCGACCGAGCTGTTCGATACGCGCCCGCGTGTCAGTTCGGTCGACGCCATGGC GTCCGTAGCCGCGCACGTATGCCCGGAAGTGCTGCGATCGCTGCCGCGCTGCGATCAGCGCGCCAAGGGTGAGGACTATG TGACCGGCCTGCTGAAGGTGCGCGGGCGTAAGTCGGCACGCAACATGGCGGCCACCATGGGGCAATCGATGGGCCGGGAG GTGAGCGAGCAGAACCTGCATCACTTCGTGAACAGCTCCACCTGGGATTGGTGGGCGGTGCGCCGGGATCTGACGTCGTA CCTCACCAGCGCCCACCACCCGGCGGCATGGGTGGTCACGCCGATGCTGATCCCCAAGGCCGGCGTGCACTCGGTGGGTG TGGACCGGCGCTACTGCCCTCGTGCCGGTCGCGCGGTCAACGGCCAGCTGGCGCTGAGCGTGTGGCTCGCTGCCGACGGT TTCGCGGTGCCGGTGAGCTGGCGGCTGCACCTGTCCCAGCCCTGGCTGGAATCCGCCACCAAGAAGTCCAAGACGTCGAT CCCCGAGGACTACCCGCTGGAATCGGTGAGCGGCTGCGCGCTTTCGTCGTTCCAGGAGTTCGTCCGGATCGCGCGCCCGG CCAAGGCGCCTGTCATCTTCGACCTACTGGGCGCCAGTGCCGCGGACCTCGCGCAGGTGTTCGGGACACTTACCCATCAG GTGGCAACCACGCGCGTGCCCAGCGACCTACAGCTTCAGGTCATTGACCCGGCCTTCGCCGGCTACCAGGGGCGGGTACT TCCCGCCGCGCAGATTGTGCAGGCCACCAAGGGCTCACGGCGCACCGAGCAGTACGTCTATCAGGGACGCCGCCACCTGA TCAGTATTGCCAAGGTCCAGCTGGCCGATCCGGCGGCGGCCCGGCCGCGGACACCCCTGACTCTGGTGGGCATGATGCCC CTGGATCACCCGCGTGCCCGCACCGAACTCTGGTTGACCAACGATCCCGAGTTTTCCACGTCGTCGCAGGCACACCAGGT GGCACTGGCCGATCACGTGCAACAGGGATACCTGCACCTGGCCAATCGCATGGGTATGCAGGACTTCGCGGGACGGTCGT TCACCGGGTGGCATCGGCACTCCACCCTGGTGTCCATCGCGGCGACGGTGGGCTGCCTGGTGTCACCCGGTCTGGCGAGT GAGCAGCGAGCCTCTCACTTTCCACAGCTTGATGGCGAGCTGCGTGTCCAAGAGGCGCTCGGCGTCCTGCCACCCGTCAC CCAGTAG
Upstream 100 bases:
>100_bases TCCGTCACTTTGTGTGGCGCCAATACCTGTTCTCCGGCCCGCATCTCGCCCATTCTTGGGTCGACATTGAACATCCGCTA ATTCATCGAGGTGCTTCAGC
Downstream 100 bases:
>100_bases TTCGTTCACCCGGTCAAGACGGCGCACCACCGTGTTGGGGTGTGTGTGCAGGATCTTCGCTGCCCGGGTGGGGCTGGCGC CGACGGAGAAGTACACGTCG
Product: putative ISXo8 transposase
Products: NA
Alternate protein names: ISXo8 Transposase; IS4 Family Transposase; Transposase IS4 Family Protein; Transcriptional Regulator; ISRSO17-Transposase Protein; TylR-Like Regulatory Protein; Regulatory; Regulatory Protein; Isrso17-Transposase Protein; IS6 Family Transposase; Transposase ISRS; Isrso17-Transposase; Secondary Metabolite Regulator; LOW QUALITY PROTEIN IS4 Family Transposase
Number of amino acids: Translated: 428; Mature: 427
Protein sequence:
>428_residues MTSATKTRAATELFDTRPRVSSVDAMASVAAHVCPEVLRSLPRCDQRAKGEDYVTGLLKVRGRKSARNMAATMGQSMGRE VSEQNLHHFVNSSTWDWWAVRRDLTSYLTSAHHPAAWVVTPMLIPKAGVHSVGVDRRYCPRAGRAVNGQLALSVWLAADG FAVPVSWRLHLSQPWLESATKKSKTSIPEDYPLESVSGCALSSFQEFVRIARPAKAPVIFDLLGASAADLAQVFGTLTHQ VATTRVPSDLQLQVIDPAFAGYQGRVLPAAQIVQATKGSRRTEQYVYQGRRHLISIAKVQLADPAAARPRTPLTLVGMMP LDHPRARTELWLTNDPEFSTSSQAHQVALADHVQQGYLHLANRMGMQDFAGRSFTGWHRHSTLVSIAATVGCLVSPGLAS EQRASHFPQLDGELRVQEALGVLPPVTQ
Sequences:
>Translated_428_residues MTSATKTRAATELFDTRPRVSSVDAMASVAAHVCPEVLRSLPRCDQRAKGEDYVTGLLKVRGRKSARNMAATMGQSMGRE VSEQNLHHFVNSSTWDWWAVRRDLTSYLTSAHHPAAWVVTPMLIPKAGVHSVGVDRRYCPRAGRAVNGQLALSVWLAADG FAVPVSWRLHLSQPWLESATKKSKTSIPEDYPLESVSGCALSSFQEFVRIARPAKAPVIFDLLGASAADLAQVFGTLTHQ VATTRVPSDLQLQVIDPAFAGYQGRVLPAAQIVQATKGSRRTEQYVYQGRRHLISIAKVQLADPAAARPRTPLTLVGMMP LDHPRARTELWLTNDPEFSTSSQAHQVALADHVQQGYLHLANRMGMQDFAGRSFTGWHRHSTLVSIAATVGCLVSPGLAS EQRASHFPQLDGELRVQEALGVLPPVTQ >Mature_427_residues TSATKTRAATELFDTRPRVSSVDAMASVAAHVCPEVLRSLPRCDQRAKGEDYVTGLLKVRGRKSARNMAATMGQSMGREV SEQNLHHFVNSSTWDWWAVRRDLTSYLTSAHHPAAWVVTPMLIPKAGVHSVGVDRRYCPRAGRAVNGQLALSVWLAADGF AVPVSWRLHLSQPWLESATKKSKTSIPEDYPLESVSGCALSSFQEFVRIARPAKAPVIFDLLGASAADLAQVFGTLTHQV ATTRVPSDLQLQVIDPAFAGYQGRVLPAAQIVQATKGSRRTEQYVYQGRRHLISIAKVQLADPAAARPRTPLTLVGMMPL DHPRARTELWLTNDPEFSTSSQAHQVALADHVQQGYLHLANRMGMQDFAGRSFTGWHRHSTLVSIAATVGCLVSPGLASE QRASHFPQLDGELRVQEALGVLPPVTQ
Specific function: Unknown
COG id: COG5659
COG function: function code L; FOG: Transposase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 46785; Mature: 46654
Theoretical pI: Translated: 10.00; Mature: 10.00
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSATKTRAATELFDTRPRVSSVDAMASVAAHVCPEVLRSLPRCDQRAKGEDYVTGLLKV CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHH RGRKSARNMAATMGQSMGREVSEQNLHHFVNSSTWDWWAVRRDLTSYLTSAHHPAAWVVT HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHEEH PMLIPKAGVHSVGVDRRYCPRAGRAVNGQLALSVWLAADGFAVPVSWRLHLSQPWLESAT HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEEEECCCHHHHHHH KKSKTSIPEDYPLESVSGCALSSFQEFVRIARPAKAPVIFDLLGASAADLAQVFGTLTHQ HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHH VATTRVPSDLQLQVIDPAFAGYQGRVLPAAQIVQATKGSRRTEQYVYQGRRHLISIAKVQ HHHCCCCCCCEEEEECHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHE LADPAAARPRTPLTLVGMMPLDHPRARTELWLTNDPEFSTSSQAHQVALADHVQQGYLHL ECCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH ANRMGMQDFAGRSFTGWHRHSTLVSIAATVGCLVSPGLASEQRASHFPQLDGELRVQEAL HHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEHHHHH GVLPPVTQ CCCCCCCC >Mature Secondary Structure TSATKTRAATELFDTRPRVSSVDAMASVAAHVCPEVLRSLPRCDQRAKGEDYVTGLLKV CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHH RGRKSARNMAATMGQSMGREVSEQNLHHFVNSSTWDWWAVRRDLTSYLTSAHHPAAWVVT HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHEEH PMLIPKAGVHSVGVDRRYCPRAGRAVNGQLALSVWLAADGFAVPVSWRLHLSQPWLESAT HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEEEECCCHHHHHHH KKSKTSIPEDYPLESVSGCALSSFQEFVRIARPAKAPVIFDLLGASAADLAQVFGTLTHQ HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHH VATTRVPSDLQLQVIDPAFAGYQGRVLPAAQIVQATKGSRRTEQYVYQGRRHLISIAKVQ HHHCCCCCCCEEEEECHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHE LADPAAARPRTPLTLVGMMPLDHPRARTELWLTNDPEFSTSSQAHQVALADHVQQGYLHL ECCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH ANRMGMQDFAGRSFTGWHRHSTLVSIAATVGCLVSPGLASEQRASHFPQLDGELRVQEAL HHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEHHHHH GVLPPVTQ CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA