Definition Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence.
Accession NC_010397
Length 5,067,172

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The map label for this gene is 169627397

Identifier: 169627397

GI number: 169627397

Start: 293736

End: 295022

Strand: Reverse

Name: 169627397

Synonym: MAB_0292c

Alternate gene names: NA

Gene position: 295022-293736 (Counterclockwise)

Preceding gene: 169627404

Following gene: 169627389

Centisome position: 5.82

GC content: 67.13

Gene sequence:

>1287_bases
ATGACTTCTGCGACCAAGACCCGGGCCGCGACCGAGCTGTTCGATACGCGCCCGCGTGTCAGTTCGGTCGACGCCATGGC
GTCCGTAGCCGCGCACGTATGCCCGGAAGTGCTGCGATCGCTGCCGCGCTGCGATCAGCGCGCCAAGGGTGAGGACTATG
TGACCGGCCTGCTGAAGGTGCGCGGGCGTAAGTCGGCACGCAACATGGCGGCCACCATGGGGCAATCGATGGGCCGGGAG
GTGAGCGAGCAGAACCTGCATCACTTCGTGAACAGCTCCACCTGGGATTGGTGGGCGGTGCGCCGGGATCTGACGTCGTA
CCTCACCAGCGCCCACCACCCGGCGGCATGGGTGGTCACGCCGATGCTGATCCCCAAGGCCGGCGTGCACTCGGTGGGTG
TGGACCGGCGCTACTGCCCTCGTGCCGGTCGCGCGGTCAACGGCCAGCTGGCGCTGAGCGTGTGGCTCGCTGCCGACGGT
TTCGCGGTGCCGGTGAGCTGGCGGCTGCACCTGTCCCAGCCCTGGCTGGAATCCGCCACCAAGAAGTCCAAGACGTCGAT
CCCCGAGGACTACCCGCTGGAATCGGTGAGCGGCTGCGCGCTTTCGTCGTTCCAGGAGTTCGTCCGGATCGCGCGCCCGG
CCAAGGCGCCTGTCATCTTCGACCTACTGGGCGCCAGTGCCGCGGACCTCGCGCAGGTGTTCGGGACACTTACCCATCAG
GTGGCAACCACGCGCGTGCCCAGCGACCTACAGCTTCAGGTCATTGACCCGGCCTTCGCCGGCTACCAGGGGCGGGTACT
TCCCGCCGCGCAGATTGTGCAGGCCACCAAGGGCTCACGGCGCACCGAGCAGTACGTCTATCAGGGACGCCGCCACCTGA
TCAGTATTGCCAAGGTCCAGCTGGCCGATCCGGCGGCGGCCCGGCCGCGGACACCCCTGACTCTGGTGGGCATGATGCCC
CTGGATCACCCGCGTGCCCGCACCGAACTCTGGTTGACCAACGATCCCGAGTTTTCCACGTCGTCGCAGGCACACCAGGT
GGCACTGGCCGATCACGTGCAACAGGGATACCTGCACCTGGCCAATCGCATGGGTATGCAGGACTTCGCGGGACGGTCGT
TCACCGGGTGGCATCGGCACTCCACCCTGGTGTCCATCGCGGCGACGGTGGGCTGCCTGGTGTCACCCGGTCTGGCGAGT
GAGCAGCGAGCCTCTCACTTTCCACAGCTTGATGGCGAGCTGCGTGTCCAAGAGGCGCTCGGCGTCCTGCCACCCGTCAC
CCAGTAG

Upstream 100 bases:

>100_bases
TCCGTCACTTTGTGTGGCGCCAATACCTGTTCTCCGGCCCGCATCTCGCCCATTCTTGGGTCGACATTGAACATCCGCTA
ATTCATCGAGGTGCTTCAGC

Downstream 100 bases:

>100_bases
TTCGTTCACCCGGTCAAGACGGCGCACCACCGTGTTGGGGTGTGTGTGCAGGATCTTCGCTGCCCGGGTGGGGCTGGCGC
CGACGGAGAAGTACACGTCG

Product: putative ISXo8 transposase

Products: NA

Alternate protein names: ISXo8 Transposase; IS4 Family Transposase; Transposase IS4 Family Protein; Transcriptional Regulator; ISRSO17-Transposase Protein; TylR-Like Regulatory Protein; Regulatory; Regulatory Protein; Isrso17-Transposase Protein; IS6 Family Transposase; Transposase ISRS; Isrso17-Transposase; Secondary Metabolite Regulator; LOW QUALITY PROTEIN IS4 Family Transposase

Number of amino acids: Translated: 428; Mature: 427

Protein sequence:

>428_residues
MTSATKTRAATELFDTRPRVSSVDAMASVAAHVCPEVLRSLPRCDQRAKGEDYVTGLLKVRGRKSARNMAATMGQSMGRE
VSEQNLHHFVNSSTWDWWAVRRDLTSYLTSAHHPAAWVVTPMLIPKAGVHSVGVDRRYCPRAGRAVNGQLALSVWLAADG
FAVPVSWRLHLSQPWLESATKKSKTSIPEDYPLESVSGCALSSFQEFVRIARPAKAPVIFDLLGASAADLAQVFGTLTHQ
VATTRVPSDLQLQVIDPAFAGYQGRVLPAAQIVQATKGSRRTEQYVYQGRRHLISIAKVQLADPAAARPRTPLTLVGMMP
LDHPRARTELWLTNDPEFSTSSQAHQVALADHVQQGYLHLANRMGMQDFAGRSFTGWHRHSTLVSIAATVGCLVSPGLAS
EQRASHFPQLDGELRVQEALGVLPPVTQ

Sequences:

>Translated_428_residues
MTSATKTRAATELFDTRPRVSSVDAMASVAAHVCPEVLRSLPRCDQRAKGEDYVTGLLKVRGRKSARNMAATMGQSMGRE
VSEQNLHHFVNSSTWDWWAVRRDLTSYLTSAHHPAAWVVTPMLIPKAGVHSVGVDRRYCPRAGRAVNGQLALSVWLAADG
FAVPVSWRLHLSQPWLESATKKSKTSIPEDYPLESVSGCALSSFQEFVRIARPAKAPVIFDLLGASAADLAQVFGTLTHQ
VATTRVPSDLQLQVIDPAFAGYQGRVLPAAQIVQATKGSRRTEQYVYQGRRHLISIAKVQLADPAAARPRTPLTLVGMMP
LDHPRARTELWLTNDPEFSTSSQAHQVALADHVQQGYLHLANRMGMQDFAGRSFTGWHRHSTLVSIAATVGCLVSPGLAS
EQRASHFPQLDGELRVQEALGVLPPVTQ
>Mature_427_residues
TSATKTRAATELFDTRPRVSSVDAMASVAAHVCPEVLRSLPRCDQRAKGEDYVTGLLKVRGRKSARNMAATMGQSMGREV
SEQNLHHFVNSSTWDWWAVRRDLTSYLTSAHHPAAWVVTPMLIPKAGVHSVGVDRRYCPRAGRAVNGQLALSVWLAADGF
AVPVSWRLHLSQPWLESATKKSKTSIPEDYPLESVSGCALSSFQEFVRIARPAKAPVIFDLLGASAADLAQVFGTLTHQV
ATTRVPSDLQLQVIDPAFAGYQGRVLPAAQIVQATKGSRRTEQYVYQGRRHLISIAKVQLADPAAARPRTPLTLVGMMPL
DHPRARTELWLTNDPEFSTSSQAHQVALADHVQQGYLHLANRMGMQDFAGRSFTGWHRHSTLVSIAATVGCLVSPGLASE
QRASHFPQLDGELRVQEALGVLPPVTQ

Specific function: Unknown

COG id: COG5659

COG function: function code L; FOG: Transposase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 46785; Mature: 46654

Theoretical pI: Translated: 10.00; Mature: 10.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSATKTRAATELFDTRPRVSSVDAMASVAAHVCPEVLRSLPRCDQRAKGEDYVTGLLKV
CCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHH
RGRKSARNMAATMGQSMGREVSEQNLHHFVNSSTWDWWAVRRDLTSYLTSAHHPAAWVVT
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHEEH
PMLIPKAGVHSVGVDRRYCPRAGRAVNGQLALSVWLAADGFAVPVSWRLHLSQPWLESAT
HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEEEECCCHHHHHHH
KKSKTSIPEDYPLESVSGCALSSFQEFVRIARPAKAPVIFDLLGASAADLAQVFGTLTHQ
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHH
VATTRVPSDLQLQVIDPAFAGYQGRVLPAAQIVQATKGSRRTEQYVYQGRRHLISIAKVQ
HHHCCCCCCCEEEEECHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHE
LADPAAARPRTPLTLVGMMPLDHPRARTELWLTNDPEFSTSSQAHQVALADHVQQGYLHL
ECCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
ANRMGMQDFAGRSFTGWHRHSTLVSIAATVGCLVSPGLASEQRASHFPQLDGELRVQEAL
HHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEHHHHH
GVLPPVTQ
CCCCCCCC
>Mature Secondary Structure 
TSATKTRAATELFDTRPRVSSVDAMASVAAHVCPEVLRSLPRCDQRAKGEDYVTGLLKV
CCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHCCCHHHHHHHHHH
RGRKSARNMAATMGQSMGREVSEQNLHHFVNSSTWDWWAVRRDLTSYLTSAHHPAAWVVT
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCCHHEEH
PMLIPKAGVHSVGVDRRYCPRAGRAVNGQLALSVWLAADGFAVPVSWRLHLSQPWLESAT
HHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCEEEEEEEEEECCCHHHHHHH
KKSKTSIPEDYPLESVSGCALSSFQEFVRIARPAKAPVIFDLLGASAADLAQVFGTLTHQ
HHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCHHHHHHHHHHHHHH
VATTRVPSDLQLQVIDPAFAGYQGRVLPAAQIVQATKGSRRTEQYVYQGRRHLISIAKVQ
HHHCCCCCCCEEEEECHHHCCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHE
LADPAAARPRTPLTLVGMMPLDHPRARTELWLTNDPEFSTSSQAHQVALADHVQQGYLHL
ECCCCCCCCCCCEEEEECCCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHH
ANRMGMQDFAGRSFTGWHRHSTLVSIAATVGCLVSPGLASEQRASHFPQLDGELRVQEAL
HHHCCHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCEEHHHHH
GVLPPVTQ
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA