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The map label for this gene is yngJ [H]

Identifier: 169627360

GI number: 169627360

Start: 257385

End: 258620

Strand: Direct

Name: yngJ [H]

Synonym: MAB_0255

Alternate gene names: 169627360

Gene position: 257385-258620 (Clockwise)

Preceding gene: 169627358

Following gene: 169627365

Centisome position: 5.08

GC content: 64.08

Gene sequence:

>1236_bases
ATGGACTTCGCCCCGTCTGCCCGCGCCGCCGAATTGATCGCCGCCGTCCGAGAGTTCATCGACGCAGAGGTCATGCCGGT
AGAACGTGCGGTGTTGGCCCACCATGACGAGCTGCTGGGTGCACGCGCGGGTACGACCGCCGAACTGTGGCACGTGCCCC
CCGAGCTGGATTCACTCAAGGCGAAAGCGCGTGCTGCCGGATTGTGGAATCTGTTTCTGCCCGATCCCGAATTGGGTGGC
GGGCTATCCAACTCCGAATACGCGCCGCTGGCCGAACAGATGGGTCGTTCGCTGTTCGCGCCCACGGTATTCAACTGCAA
CGCACCTGATTCCGGAAACATGGAGGTACTGCACCGATACGGCAGTCAGGAGCAGAAAGAGGTATGGCTCGAACCACTGT
TGGAGGGCGATATCCGGTCCGCGTTCTGCATGACCGAACCCGATGTCGCATCTTCCGATGCCACGAACATGGCAGCCACT
GCCGTCGTCGAGGGCGACGAGGTGGTGATCAACGGGCGTAAGTGGTGGAGCACCGGCGTCGGCCACCCGGACTGCAAGGT
GATCATCTTCATGGGTCTGACGGACCCCAACGCGCATCGGTACGCCCGCCACTCCATGGTTTTGGTCCCGATGGACACCC
CGGGTATCACCGTTGAGCGCATGCTGCCCACCATGGGCTTTTACGACGAGCCAGGCGGACACGGGGTGGTGTCGTTCGAC
AATGTGCGGCTCCCGGCCGATGCGTTCATCGCCGGGCCGGGCAAGGGATTCGAGATCGCTCAGGGAAGGCTGGGGCCTGG
GCGCGTGCACCATGCGATGCGGCTGATCGGTCTGGCCGAGGTGGCGTTGGAGCACGCGTGCCGACGAGGCCTGGACCGCA
CCGCCTTTGGCAAACCGTTGGTAAACCTGGGCGGTAACCGTGAGCGCATCGCCGATGCGCGCATCGCCATCAACCAGACG
CGGCTACTGGTGCTGCATGCCGCCTGGCTGCTGGACACCGTGGGCATCATGGGAGCGCTGTCGGCGGTGTCCGAGATCAA
GGTGGCCGCCCCCAACATGGCCCAGCAGGTCATTGACATGGCGATCCAAATACACGGTGGTGGAGGGCTTTCCAATGACT
TTCCGCTGGCAGCCGCCTGGGTGAACGCGCGAGCGCTGCGGCTGGCCGACGGGCCCGACGAGGTGCACCGCGGCGTGGTG
GCCCGAATTGAGTTGGCGAAATACGCTAACGACTGA

Upstream 100 bases:

>100_bases
AGCAGACCGTCACGACGCTGAGCACCAGCAGGCTCACGCGGCTCTTGCTCATGCCGCGAAGTCTGTCGCGTGCGGGACCC
GCGCCTCTAGCATCGGACAG

Downstream 100 bases:

>100_bases
CGGTGAGTGCGTAGCGCATCCCGCGATGCAGACTGGCGCCTACCAGCAGCCCCAGCGCGATCGAGAAGATCGCCATGCAG
GTGTCGAGCAGCGCGGTCAG

Product: putative acyl-CoA dehydrogenase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MDFAPSARAAELIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGLWNLFLPDPELGG
GLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAAT
AVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPNAHRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGVVSFD
NVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPLVNLGGNRERIADARIAINQT
RLLVLHAAWLLDTVGIMGALSAVSEIKVAAPNMAQQVIDMAIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHRGVV
ARIELAKYAND

Sequences:

>Translated_411_residues
MDFAPSARAAELIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGLWNLFLPDPELGG
GLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAAT
AVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPNAHRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGVVSFD
NVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPLVNLGGNRERIADARIAINQT
RLLVLHAAWLLDTVGIMGALSAVSEIKVAAPNMAQQVIDMAIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHRGVV
ARIELAKYAND
>Mature_411_residues
MDFAPSARAAELIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELDSLKAKARAAGLWNLFLPDPELGG
GLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAAT
AVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLTDPNAHRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGVVSFD
NVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPLVNLGGNRERIADARIAINQT
RLLVLHAAWLLDTVGIMGALSAVSEIKVAAPNMAQQVIDMAIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHRGVV
ARIELAKYAND

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the acyl-CoA dehydrogenase family [H]

Homologues:

Organism=Homo sapiens, GI211971008, Length=409, Percent_Identity=52.8117359413203, Blast_Score=408, Evalue=1e-114,
Organism=Homo sapiens, GI48976061, Length=409, Percent_Identity=52.8117359413203, Blast_Score=408, Evalue=1e-114,
Organism=Homo sapiens, GI38505218, Length=405, Percent_Identity=48.8888888888889, Blast_Score=400, Evalue=1e-111,
Organism=Homo sapiens, GI4557233, Length=342, Percent_Identity=32.4561403508772, Blast_Score=148, Evalue=7e-36,
Organism=Homo sapiens, GI4557231, Length=411, Percent_Identity=28.2238442822384, Blast_Score=141, Evalue=9e-34,
Organism=Homo sapiens, GI187960098, Length=417, Percent_Identity=27.5779376498801, Blast_Score=141, Evalue=1e-33,
Organism=Homo sapiens, GI4501859, Length=401, Percent_Identity=25.9351620947631, Blast_Score=117, Evalue=2e-26,
Organism=Homo sapiens, GI21361497, Length=352, Percent_Identity=26.1363636363636, Blast_Score=105, Evalue=9e-23,
Organism=Homo sapiens, GI7656849, Length=345, Percent_Identity=25.7971014492754, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI4501857, Length=400, Percent_Identity=27.5, Blast_Score=99, Evalue=7e-21,
Organism=Homo sapiens, GI226958414, Length=337, Percent_Identity=27.0029673590504, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI226958412, Length=337, Percent_Identity=27.0029673590504, Blast_Score=97, Evalue=2e-20,
Organism=Homo sapiens, GI4557235, Length=345, Percent_Identity=28.9855072463768, Blast_Score=96, Evalue=7e-20,
Organism=Homo sapiens, GI76496475, Length=345, Percent_Identity=28.9855072463768, Blast_Score=96, Evalue=7e-20,
Organism=Escherichia coli, GI87081958, Length=322, Percent_Identity=29.5031055900621, Blast_Score=103, Evalue=2e-23,
Organism=Escherichia coli, GI1786223, Length=336, Percent_Identity=26.7857142857143, Blast_Score=92, Evalue=7e-20,
Organism=Caenorhabditis elegans, GI17562446, Length=407, Percent_Identity=48.4029484029484, Blast_Score=379, Evalue=1e-105,
Organism=Caenorhabditis elegans, GI17534899, Length=359, Percent_Identity=29.5264623955432, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI17569725, Length=393, Percent_Identity=27.4809160305344, Blast_Score=135, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17570075, Length=415, Percent_Identity=27.4698795180723, Blast_Score=126, Evalue=2e-29,
Organism=Caenorhabditis elegans, GI17538396, Length=292, Percent_Identity=29.4520547945205, Blast_Score=111, Evalue=7e-25,
Organism=Caenorhabditis elegans, GI17506239, Length=284, Percent_Identity=28.8732394366197, Blast_Score=110, Evalue=1e-24,
Organism=Caenorhabditis elegans, GI17533517, Length=364, Percent_Identity=27.1978021978022, Blast_Score=104, Evalue=7e-23,
Organism=Caenorhabditis elegans, GI17508101, Length=346, Percent_Identity=24.2774566473988, Blast_Score=101, Evalue=6e-22,
Organism=Caenorhabditis elegans, GI17505929, Length=339, Percent_Identity=24.188790560472, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI17551932, Length=289, Percent_Identity=25.2595155709343, Blast_Score=92, Evalue=5e-19,
Organism=Caenorhabditis elegans, GI71985184, Length=343, Percent_Identity=27.1137026239067, Blast_Score=90, Evalue=2e-18,
Organism=Caenorhabditis elegans, GI71990804, Length=210, Percent_Identity=28.0952380952381, Blast_Score=82, Evalue=4e-16,
Organism=Caenorhabditis elegans, GI32563615, Length=184, Percent_Identity=30.4347826086957, Blast_Score=81, Evalue=9e-16,
Organism=Caenorhabditis elegans, GI71985192, Length=274, Percent_Identity=25.9124087591241, Blast_Score=70, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24660351, Length=282, Percent_Identity=29.7872340425532, Blast_Score=134, Evalue=2e-31,
Organism=Drosophila melanogaster, GI21356377, Length=345, Percent_Identity=28.9855072463768, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24646207, Length=394, Percent_Identity=28.4263959390863, Blast_Score=127, Evalue=2e-29,
Organism=Drosophila melanogaster, GI24666513, Length=294, Percent_Identity=26.1904761904762, Blast_Score=104, Evalue=1e-22,
Organism=Drosophila melanogaster, GI281363737, Length=400, Percent_Identity=25.5, Blast_Score=95, Evalue=1e-19,
Organism=Drosophila melanogaster, GI19920834, Length=339, Percent_Identity=24.7787610619469, Blast_Score=74, Evalue=1e-13,
Organism=Drosophila melanogaster, GI21355753, Length=331, Percent_Identity=23.8670694864048, Blast_Score=69, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006089
- InterPro:   IPR006092
- InterPro:   IPR006090
- InterPro:   IPR006091
- InterPro:   IPR009075
- InterPro:   IPR013786
- InterPro:   IPR009100 [H]

Pfam domain/function: PF00441 Acyl-CoA_dh_1; PF02770 Acyl-CoA_dh_M; PF02771 Acyl-CoA_dh_N [H]

EC number: NA

Molecular weight: Translated: 44185; Mature: 44185

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFAPSARAAELIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELDSLK
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
AKARAAGLWNLFLPDPELGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRY
HHHHHCCEEEEECCCCCCCCCCCCCCCCHHHHHHCHHHCCCEEEECCCCCCCCHHHHHHH
GSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAATAVVEGDEVVINGRKWWSTGV
CCHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCCCEEEEEEECCEEEECCCEEEECCC
GHPDCKVIIFMGLTDPNAHRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGVVSFD
CCCCCEEEEEEECCCCCHHHHHHCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEEC
NVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPL
CEECCCCCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
VNLGGNRERIADARIAINQTRLLVLHAAWLLDTVGIMGALSAVSEIKVAAPNMAQQVIDM
HHCCCCHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHE
AIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHRGVVARIELAKYAND
EEEEECCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MDFAPSARAAELIAAVREFIDAEVMPVERAVLAHHDELLGARAGTTAELWHVPPELDSLK
CCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHH
AKARAAGLWNLFLPDPELGGGLSNSEYAPLAEQMGRSLFAPTVFNCNAPDSGNMEVLHRY
HHHHHCCEEEEECCCCCCCCCCCCCCCCHHHHHHCHHHCCCEEEECCCCCCCCHHHHHHH
GSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAATAVVEGDEVVINGRKWWSTGV
CCHHHHHHHHHHHHCCCHHHEEECCCCCCCCCCCCCCEEEEEEECCEEEECCCEEEECCC
GHPDCKVIIFMGLTDPNAHRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGVVSFD
CCCCCEEEEEEECCCCCHHHHHHCCEEEEECCCCCCCHHHHHCCCCCCCCCCCCEEEEEC
NVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAMRLIGLAEVALEHACRRGLDRTAFGKPL
CEECCCCCEEECCCCCCEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCH
VNLGGNRERIADARIAINQTRLLVLHAAWLLDTVGIMGALSAVSEIKVAAPNMAQQVIDM
HHCCCCHHHHHHHHEEECCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHE
AIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHRGVVARIELAKYAND
EEEEECCCCCCCCCCCEEEECCCEEEEECCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9387222; 9384377 [H]