| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627340
Identifier: 169627340
GI number: 169627340
Start: 243896
End: 244633
Strand: Direct
Name: 169627340
Synonym: MAB_0235
Alternate gene names: NA
Gene position: 243896-244633 (Clockwise)
Preceding gene: 169627339
Following gene: 169627341
Centisome position: 4.81
GC content: 60.84
Gene sequence:
>738_bases ATGACCGATCTATCTACCGCAGCACCCCAGAGCATGTACCCGCACCAACCCGGTTACGTGCCCTCCCCACCGCCTGACGA CATGCGGCTAGAGCCGGGGGCGCGATCCCATGAACCCAAGTTCGACGGCACCCACTACGAGCAGGCAGAAGCGCTATTCG CCCATGTGCAAAAGGAACTGAAAAAGCACATCGAAAAGACGGCTGCGAATGCGCACCTCTACAGCCAAGAGGGGCTGAGG AAGCAACTAGCGGCATTTCAGCACACCGACGCGGCCAAGGGCATCGACAAGGCATTGGCTCGGGTGGAAGCAGTACACGA GCAGGCTAAGGCAGACATGGAACGCGTCTATCGCGAGCTCACACCCCCCGGGGATGCAGTCGCGGAGTCCCGCGCCGCAC GGTACTGGCACCGTTCCGAGCGCCTACTTGACGCATCTAAGGACAAGCAGGGCATCGCAAGGCAACTCATTGAGAAGTCA AGCAATGAAGAGCTCGCAGTGCTACTCGAAGAGCTGCCCGTTTACTTGGCAAGCGTTGGTGCGCAGGGGTCCTGGCTAGA TGAAGAGGTGGCCAAGCGGTCTCCCGCGTACGGCATGGCGAAGCGCCGCGAGCATCGGGCAAGTCAGGCCGTAGTTCAGG TCAAGAGCTCGGCGCTTCTCCTGCAAAGCGCACTGAGGGAAGGCCGCGCAATGCATGTGCCCATCCGCTTCAACCGCAGC ATCGACCCCGACAAGTGA
Upstream 100 bases:
>100_bases ACCGCTGGCATCACGCCGTGGCCGCATACGCGGAGGGCAGGCCCGAAAATGCCACGGCTGCAATGGAATTGTGGCAACTC ACAGCAAAGGACGAATGATC
Downstream 100 bases:
>100_bases CTTCGGTGTTGACGATGCCACCAGCCGCAACGGCTACCGGTGTCGTGACCACAACGCCGGACGGTGCCGAGGACGGTCAC ACCTCGCGCACCAACCCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 245; Mature: 244
Protein sequence:
>245_residues MTDLSTAAPQSMYPHQPGYVPSPPPDDMRLEPGARSHEPKFDGTHYEQAEALFAHVQKELKKHIEKTAANAHLYSQEGLR KQLAAFQHTDAAKGIDKALARVEAVHEQAKADMERVYRELTPPGDAVAESRAARYWHRSERLLDASKDKQGIARQLIEKS SNEELAVLLEELPVYLASVGAQGSWLDEEVAKRSPAYGMAKRREHRASQAVVQVKSSALLLQSALREGRAMHVPIRFNRS IDPDK
Sequences:
>Translated_245_residues MTDLSTAAPQSMYPHQPGYVPSPPPDDMRLEPGARSHEPKFDGTHYEQAEALFAHVQKELKKHIEKTAANAHLYSQEGLR KQLAAFQHTDAAKGIDKALARVEAVHEQAKADMERVYRELTPPGDAVAESRAARYWHRSERLLDASKDKQGIARQLIEKS SNEELAVLLEELPVYLASVGAQGSWLDEEVAKRSPAYGMAKRREHRASQAVVQVKSSALLLQSALREGRAMHVPIRFNRS IDPDK >Mature_244_residues TDLSTAAPQSMYPHQPGYVPSPPPDDMRLEPGARSHEPKFDGTHYEQAEALFAHVQKELKKHIEKTAANAHLYSQEGLRK QLAAFQHTDAAKGIDKALARVEAVHEQAKADMERVYRELTPPGDAVAESRAARYWHRSERLLDASKDKQGIARQLIEKSS NEELAVLLEELPVYLASVGAQGSWLDEEVAKRSPAYGMAKRREHRASQAVVQVKSSALLLQSALREGRAMHVPIRFNRSI DPDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27374; Mature: 27243
Theoretical pI: Translated: 8.04; Mature: 8.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTDLSTAAPQSMYPHQPGYVPSPPPDDMRLEPGARSHEPKFDGTHYEQAEALFAHVQKEL CCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH KKHIEKTAANAHLYSQEGLRKQLAAFQHTDAAKGIDKALARVEAVHEQAKADMERVYREL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPPGDAVAESRAARYWHRSERLLDASKDKQGIARQLIEKSSNEELAVLLEELPVYLASVG CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC AQGSWLDEEVAKRSPAYGMAKRREHRASQAVVQVKSSALLLQSALREGRAMHVPIRFNRS CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC IDPDK CCCCC >Mature Secondary Structure TDLSTAAPQSMYPHQPGYVPSPPPDDMRLEPGARSHEPKFDGTHYEQAEALFAHVQKEL CCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHH KKHIEKTAANAHLYSQEGLRKQLAAFQHTDAAKGIDKALARVEAVHEQAKADMERVYREL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC TPPGDAVAESRAARYWHRSERLLDASKDKQGIARQLIEKSSNEELAVLLEELPVYLASVG CCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHC AQGSWLDEEVAKRSPAYGMAKRREHRASQAVVQVKSSALLLQSALREGRAMHVPIRFNRS CCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCC IDPDK CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA