| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
Click here to switch to the map view.
The map label for this gene is 169627292
Identifier: 169627292
GI number: 169627292
Start: 193996
End: 195162
Strand: Direct
Name: 169627292
Synonym: MAB_0187
Alternate gene names: NA
Gene position: 193996-195162 (Clockwise)
Preceding gene: 169627286
Following gene: 169627299
Centisome position: 3.83
GC content: 70.09
Gene sequence:
>1167_bases ATGCAGCCCAGTCCGTACACGCCAGGCCAGGTGGCACGTGAGGTCGTCGGCCGCGCCGAGCAGCTGGCCGAGATCGGCGA GCGACTGATGTACATGACGGAGCTTGGGCGGCTGATCGGCCGCATCCGTGTCGACACCGGGCCGCGTGGTGTGGGAAAGA CCTCACTGCTGCGTGAGGTCCAGCGTGCGGCCGAGGCGCGCGGTGTGGTGACGGTGTGGGTGACCGCAGGCGGCGAGGAG CCGCTGACGGCGGCGATCGCCACCCAGATCCGCGCCCGCACCGCGGGGTGGAAGAAGAAGTCACGCGGCCGGTTACTGCG AGCCATCGATCAGGTGAGCATCACCGCCGGTGTGCCGGGGGTGGCGCAACTCGGTGCGACGGTCAAACCGGCGCAGTCCG CCGAGGGGGCGTCACCGGAGCCATCCTTCAAGGAACTGATCGTCGAGACGGTCAAGGCGGCGCGCGACGAGGGACACCGG GGTCTGGTGCTGTTGATCGACGAGGTGCAGGACGCTGACCGGCAGGGATTGCGCACCCTGGCCGTCACCTGGCAGGACCT GCAGGCCGAGGCCGACGCCCTGCCTGCCGGGTTGTTCGCGGCGGGCCTCCCGCAGACGCCGGAGATCATCAGCGCCGCAG CCACCTTCAGCGAGCGGTTCGCATACCGCACATTGCATCGGCTAGGCCCCGACGCATCGCGGGTGGCGCTGGTCAAGCCC GCCGGCCAGGTCGGGGTGGACTGGGCGCCGGACGCGCTCGAGGCAGTCATCGCGCAGACGAACGGATATCCGCACACGCT GCAGCTCTACGCGGACGCCGCGTGGGCACGCGCCGGGTATCCGGATCCGGGAGGCCAGATCGGGATGCCCGATGTCGAGC ACGCCGCCCGACAGGTCGCCGAGGATATGGACGCACTCTTTCGCGCGCGCTGGAACAACGCGACCCCGGTGCAGCGGCGC TTCATGACGGCGATGGCGCAGTCATTGACCGACGATCGGGTGTCCAGCCGGTCCGATATCGCGGCCGCGTTGGGCCGTGA TTCGCGGGCTATCAGCGCCGCCCGCGCCGGGCTCATCGACAAGGGGCTCATCGCCGTGGCCGGCCACGGGCTGCTGGAGT TCAGCATCCCCGGTTTCGCGGAGTTCGTGCACGCGCAGGAGGGCTAG
Upstream 100 bases:
>100_bases AGTCGATAACTCGGTAGAAGTATCGGAAAGTATCCAGAATGTCGGCCCCACCTGATACCTATTGATACGGCACCGAGAAG TATCAAGTGAGGATTTCGGT
Downstream 100 bases:
>100_bases CCACTCCGCCGACACGCCGTGTTCTGCGTTTCGCACGTGGGAAACGCGTCAGAAACCGTAGTCTCGGCGCCCGGTCAGTC GTTATGCGGTGACTTCTCGC
Product: hypothetical protein
Products: NA
Alternate protein names: Transcriptional Regulator; AAA ATPase
Number of amino acids: Translated: 388; Mature: 388
Protein sequence:
>388_residues MQPSPYTPGQVAREVVGRAEQLAEIGERLMYMTELGRLIGRIRVDTGPRGVGKTSLLREVQRAAEARGVVTVWVTAGGEE PLTAAIATQIRARTAGWKKKSRGRLLRAIDQVSITAGVPGVAQLGATVKPAQSAEGASPEPSFKELIVETVKAARDEGHR GLVLLIDEVQDADRQGLRTLAVTWQDLQAEADALPAGLFAAGLPQTPEIISAAATFSERFAYRTLHRLGPDASRVALVKP AGQVGVDWAPDALEAVIAQTNGYPHTLQLYADAAWARAGYPDPGGQIGMPDVEHAARQVAEDMDALFRARWNNATPVQRR FMTAMAQSLTDDRVSSRSDIAAALGRDSRAISAARAGLIDKGLIAVAGHGLLEFSIPGFAEFVHAQEG
Sequences:
>Translated_388_residues MQPSPYTPGQVAREVVGRAEQLAEIGERLMYMTELGRLIGRIRVDTGPRGVGKTSLLREVQRAAEARGVVTVWVTAGGEE PLTAAIATQIRARTAGWKKKSRGRLLRAIDQVSITAGVPGVAQLGATVKPAQSAEGASPEPSFKELIVETVKAARDEGHR GLVLLIDEVQDADRQGLRTLAVTWQDLQAEADALPAGLFAAGLPQTPEIISAAATFSERFAYRTLHRLGPDASRVALVKP AGQVGVDWAPDALEAVIAQTNGYPHTLQLYADAAWARAGYPDPGGQIGMPDVEHAARQVAEDMDALFRARWNNATPVQRR FMTAMAQSLTDDRVSSRSDIAAALGRDSRAISAARAGLIDKGLIAVAGHGLLEFSIPGFAEFVHAQEG >Mature_388_residues MQPSPYTPGQVAREVVGRAEQLAEIGERLMYMTELGRLIGRIRVDTGPRGVGKTSLLREVQRAAEARGVVTVWVTAGGEE PLTAAIATQIRARTAGWKKKSRGRLLRAIDQVSITAGVPGVAQLGATVKPAQSAEGASPEPSFKELIVETVKAARDEGHR GLVLLIDEVQDADRQGLRTLAVTWQDLQAEADALPAGLFAAGLPQTPEIISAAATFSERFAYRTLHRLGPDASRVALVKP AGQVGVDWAPDALEAVIAQTNGYPHTLQLYADAAWARAGYPDPGGQIGMPDVEHAARQVAEDMDALFRARWNNATPVQRR FMTAMAQSLTDDRVSSRSDIAAALGRDSRAISAARAGLIDKGLIAVAGHGLLEFSIPGFAEFVHAQEG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41342; Mature: 41342
Theoretical pI: Translated: 6.82; Mature: 6.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQPSPYTPGQVAREVVGRAEQLAEIGERLMYMTELGRLIGRIRVDTGPRGVGKTSLLREV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHH QRAAEARGVVTVWVTAGGEEPLTAAIATQIRARTAGWKKKSRGRLLRAIDQVSITAGVPG HHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC VAQLGATVKPAQSAEGASPEPSFKELIVETVKAARDEGHRGLVLLIDEVQDADRQGLRTL HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCHHHH AVTWQDLQAEADALPAGLFAAGLPQTPEIISAAATFSERFAYRTLHRLGPDASRVALVKP HHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC AGQVGVDWAPDALEAVIAQTNGYPHTLQLYADAAWARAGYPDPGGQIGMPDVEHAARQVA CCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHH EDMDALFRARWNNATPVQRRFMTAMAQSLTDDRVSSRSDIAAALGRDSRAISAARAGLID HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHH KGLIAVAGHGLLEFSIPGFAEFVHAQEG CCHHHHHCCCEEEECCCHHHHHHHCCCC >Mature Secondary Structure MQPSPYTPGQVAREVVGRAEQLAEIGERLMYMTELGRLIGRIRVDTGPRGVGKTSLLREV CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCCHHHHHHHH QRAAEARGVVTVWVTAGGEEPLTAAIATQIRARTAGWKKKSRGRLLRAIDQVSITAGVPG HHHHHHCCEEEEEEECCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCC VAQLGATVKPAQSAEGASPEPSFKELIVETVKAARDEGHRGLVLLIDEVQDADRQGLRTL HHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHCHHHH AVTWQDLQAEADALPAGLFAAGLPQTPEIISAAATFSERFAYRTLHRLGPDASRVALVKP HHHHHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECC AGQVGVDWAPDALEAVIAQTNGYPHTLQLYADAAWARAGYPDPGGQIGMPDVEHAARQVA CCCCCCCCCHHHHHHHHHHCCCCCEEEEEEEHHHHHCCCCCCCCCCCCCCHHHHHHHHHH EDMDALFRARWNNATPVQRRFMTAMAQSLTDDRVSSRSDIAAALGRDSRAISAARAGLID HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHCCCHHHHHHHHHCCHH KGLIAVAGHGLLEFSIPGFAEFVHAQEG CCHHHHHCCCEEEECCCHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA