| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627241
Identifier: 169627241
GI number: 169627241
Start: 133580
End: 134686
Strand: Direct
Name: 169627241
Synonym: MAB_0136
Alternate gene names: NA
Gene position: 133580-134686 (Clockwise)
Preceding gene: 169627240
Following gene: 169627242
Centisome position: 2.64
GC content: 61.07
Gene sequence:
>1107_bases ATGGGCAGCCTGCGTGACGATCCCAGATATTCGGGCACGGTCGAGGAGCGACGTCGGCGTGACCGCCGGTACGACTTTCT GCTCAAGCTGCACGGCAAAAACGGTAAGAGGGCACTGCAGCTTGCCGAGGCGCCCCGCCGAGACGACGGCTATTTCGGGC TGGACTCGGTCAGCTTCAAGGTTTACGAGAACGTGATGGTCGCGGGCATGGGAGCGCTTTCCGGGCTGTTCATCTCGGTC CTCGATCCTGATGGAGCCTACGGTGTCGGTCAGCACACGACCTATTACTACGACACGGTGGGGAGGGTGCGTCGCAGCCT GTTGTTCTTCGCGGGCGCGGTCGCGGGTGACACCGAGACGGCGATCAAGGTCGGCCGCGATCTCTTTCGTAAGCACTCCC ACATCAATGGCGAGGTTCCGTCGACGGGCGAACCCTTCCGGGCGAATCATGTTGAGACCCTGAAGTTCACATATGTAGTG GGTTGGCCGCATCTGTGGCGTGCGTACAAGAAATTCAGCGACCCCGACGCGACGTATGAAGAAGAATGCCAGTTTTACAA GGAGCAGGTGCGCGTGTGCGAGCTCATGGGCATGCCCGCGGGGGAACTACCCACCACGCCCGAAGAGGTTGACGCGTGGG TTCGGAATGCGGAGAAGAATCTGATGGCATTCACCCGGCCGGCTCAGGAACTCACCGACTTTCTGACGCACAACCCGTGG ACCCCGTTGTACCCCAACGTAATTCTGGGTGGCGGACTAAAGCTGGCAATCTGGGCGGCGATACCCTTGCTCACGCCGTA TGTCCGGGAAATCTGCGGACTCGCGACGATGCGAATCCGACCGGCCATTGGCACGGTGGCCATCAAGGGAGCGGTACGCG CTTTGCGTAATCCGATCGTCGAACGGTTGATCCTGCCGTGGTTCGGGTACGAGATGTGGGGCTATATGCACAATGCGATT CGGCATGCTCCGGATGCCGGTCCGGTGCCCTTCGATCACGAAGTAGGCCTGAAACTGCAGCAAGGAAAGGGAGGCACGCT GGGTGCGAGTGCCTGCCCGATGCATGCCGTGTCCACCGCGGCACGGCCGGTGGAGGCATCGGTATGA
Upstream 100 bases:
>100_bases TGAACTGCCGGTACCGCATCTAATATTGCAATGCAATTCGAATAGCAATACTATCTCTATGAATGAACATCGGATGCGGT CGACGGTGAGGAGATGGACT
Downstream 100 bases:
>100_bases CGCGCATCGACATCATGGCCAATGAACGGTTGCTCGACGACCGGCACCACCTACACGAATTCCAGGAACTGTGGGCCGAC GGCCCAGTGGCCTTCGTCTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 368; Mature: 367
Protein sequence:
>368_residues MGSLRDDPRYSGTVEERRRRDRRYDFLLKLHGKNGKRALQLAEAPRRDDGYFGLDSVSFKVYENVMVAGMGALSGLFISV LDPDGAYGVGQHTTYYYDTVGRVRRSLLFFAGAVAGDTETAIKVGRDLFRKHSHINGEVPSTGEPFRANHVETLKFTYVV GWPHLWRAYKKFSDPDATYEEECQFYKEQVRVCELMGMPAGELPTTPEEVDAWVRNAEKNLMAFTRPAQELTDFLTHNPW TPLYPNVILGGGLKLAIWAAIPLLTPYVREICGLATMRIRPAIGTVAIKGAVRALRNPIVERLILPWFGYEMWGYMHNAI RHAPDAGPVPFDHEVGLKLQQGKGGTLGASACPMHAVSTAARPVEASV
Sequences:
>Translated_368_residues MGSLRDDPRYSGTVEERRRRDRRYDFLLKLHGKNGKRALQLAEAPRRDDGYFGLDSVSFKVYENVMVAGMGALSGLFISV LDPDGAYGVGQHTTYYYDTVGRVRRSLLFFAGAVAGDTETAIKVGRDLFRKHSHINGEVPSTGEPFRANHVETLKFTYVV GWPHLWRAYKKFSDPDATYEEECQFYKEQVRVCELMGMPAGELPTTPEEVDAWVRNAEKNLMAFTRPAQELTDFLTHNPW TPLYPNVILGGGLKLAIWAAIPLLTPYVREICGLATMRIRPAIGTVAIKGAVRALRNPIVERLILPWFGYEMWGYMHNAI RHAPDAGPVPFDHEVGLKLQQGKGGTLGASACPMHAVSTAARPVEASV >Mature_367_residues GSLRDDPRYSGTVEERRRRDRRYDFLLKLHGKNGKRALQLAEAPRRDDGYFGLDSVSFKVYENVMVAGMGALSGLFISVL DPDGAYGVGQHTTYYYDTVGRVRRSLLFFAGAVAGDTETAIKVGRDLFRKHSHINGEVPSTGEPFRANHVETLKFTYVVG WPHLWRAYKKFSDPDATYEEECQFYKEQVRVCELMGMPAGELPTTPEEVDAWVRNAEKNLMAFTRPAQELTDFLTHNPWT PLYPNVILGGGLKLAIWAAIPLLTPYVREICGLATMRIRPAIGTVAIKGAVRALRNPIVERLILPWFGYEMWGYMHNAIR HAPDAGPVPFDHEVGLKLQQGKGGTLGASACPMHAVSTAARPVEASV
Specific function: Unknown
COG id: COG3662
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41056; Mature: 40924
Theoretical pI: Translated: 8.55; Mature: 8.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 3.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSLRDDPRYSGTVEERRRRDRRYDFLLKLHGKNGKRALQLAEAPRRDDGYFGLDSVSFK CCCCCCCCCCCCCHHHHHHHHCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHH VYENVMVAGMGALSGLFISVLDPDGAYGVGQHTTYYYDTVGRVRRSLLFFAGAVAGDTET HHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHH AIKVGRDLFRKHSHINGEVPSTGEPFRANHVETLKFTYVVGWPHLWRAYKKFSDPDATYE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCHH EECQFYKEQVRVCELMGMPAGELPTTPEEVDAWVRNAEKNLMAFTRPAQELTDFLTHNPW HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC TPLYPNVILGGGLKLAIWAAIPLLTPYVREICGLATMRIRPAIGTVAIKGAVRALRNPIV CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHEECCCHHHHHHHHHHHHHHHHHH ERLILPWFGYEMWGYMHNAIRHAPDAGPVPFDHEVGLKLQQGKGGTLGASACPMHAVSTA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHH ARPVEASV CCCCCCCC >Mature Secondary Structure GSLRDDPRYSGTVEERRRRDRRYDFLLKLHGKNGKRALQLAEAPRRDDGYFGLDSVSFK CCCCCCCCCCCCHHHHHHHHCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCCHHH VYENVMVAGMGALSGLFISVLDPDGAYGVGQHTTYYYDTVGRVRRSLLFFAGAVAGDTET HHHHHHHHHHHHHHCEEEEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCCHHH AIKVGRDLFRKHSHINGEVPSTGEPFRANHVETLKFTYVVGWPHLWRAYKKFSDPDATYE HHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEEEEEEECCHHHHHHHHHCCCCCCCHH EECQFYKEQVRVCELMGMPAGELPTTPEEVDAWVRNAEKNLMAFTRPAQELTDFLTHNPW HHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCC TPLYPNVILGGGLKLAIWAAIPLLTPYVREICGLATMRIRPAIGTVAIKGAVRALRNPIV CCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHCHHHHEECCCHHHHHHHHHHHHHHHHHH ERLILPWFGYEMWGYMHNAIRHAPDAGPVPFDHEVGLKLQQGKGGTLGASACPMHAVSTA HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHH ARPVEASV CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA