| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627234
Identifier: 169627234
GI number: 169627234
Start: 127155
End: 127907
Strand: Reverse
Name: 169627234
Synonym: MAB_0129c
Alternate gene names: NA
Gene position: 127907-127155 (Counterclockwise)
Preceding gene: 169627236
Following gene: 169627233
Centisome position: 2.52
GC content: 64.81
Gene sequence:
>753_bases GTGGCCGAATCGGAGATGTCAGCGCGCACAATCCGCCTCGAGATCGCGATTGTGCTGGCCATCAGCTTCGGGATGAGCGC ATTCAGTGCCATCCTGCAGTTCGCATCGGCCGTGCTGATGGGACTTTCCGGCCAGAGGGTCGCGCTGAATCCGCGCCGTG CCGAACTCAGTCTCATCGACCTGGGATTGAATCTGGTATCGATCACCCGGCTGGTCGCATGGGGGGCACTCGCGGTTTAT CTGTTGTGGCGCAGTGGATTTCGCCCATCTTCAGTCGGGCTGGGCCGCTGGCGCTGGCGTGCTGACGGCTTGGGCGCGTT GGGGCTGGCCGCGCTCATCGGACTTCCCGGGCTTGCCTTGTACGTCGGTGCGCGCTGGATGGGCATGAGCGTTCAGGTCA TCCCCGCGTCTCTCGATGACACCTGGTGGCGGTTACCGGTGCTGGTGCTGTCCGCATTCGCAAACGGCTGGGCCGAGGAG GTCGTGGTCATCGCCTACCTCCAGACGCGCCTGCACCAGCTGGGCTACGGAACGGCGGCCGCCATCGTGTCGTCGGCACT GCTGCGTGGTTGCTACCACCTGTACCAGGGTGTCTCGGCAGGCGTCGGCAACCTGGCGATGGGCGTGGTCTTCGGATACG TCTGGCACCGCACCGGAAGGCTATGGCCCCTGGTAGTCGCCCATGGCGTGATCGACACCGTGGCCTTTGTCGGGTACGCG TTGCTCCGGGATCACCTGGGCTGGCTCCATTAG
Upstream 100 bases:
>100_bases CACCGTCACGCTCAGCCGCACCCCGTCAGGTGCGGCCACGTAACGCGCAATGCTCACCACATCGGACACTCTTCCACCAA TACCAGCCAGAATGAGCGCC
Downstream 100 bases:
>100_bases CCTCATCTCATGGGACATCCGCGATGACCGAACCCACCGTTCCCTTCCGCGGTCGGCGCCCCGATCGGCGGGAGGACAGC CAGGTCATCCGCCGGCGTCC
Product: abortive infection protein
Products: NA
Alternate protein names: Integral Membrane Protein; CAAX Amino Terminal Protease Family; CAAX Amino Terminal Protease Family Protein; CAAX Amino Protease Family Protein; Protease; CAAX Amino Terminal Protease; CAAX Amino Protease
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MAESEMSARTIRLEIAIVLAISFGMSAFSAILQFASAVLMGLSGQRVALNPRRAELSLIDLGLNLVSITRLVAWGALAVY LLWRSGFRPSSVGLGRWRWRADGLGALGLAALIGLPGLALYVGARWMGMSVQVIPASLDDTWWRLPVLVLSAFANGWAEE VVVIAYLQTRLHQLGYGTAAAIVSSALLRGCYHLYQGVSAGVGNLAMGVVFGYVWHRTGRLWPLVVAHGVIDTVAFVGYA LLRDHLGWLH
Sequences:
>Translated_250_residues MAESEMSARTIRLEIAIVLAISFGMSAFSAILQFASAVLMGLSGQRVALNPRRAELSLIDLGLNLVSITRLVAWGALAVY LLWRSGFRPSSVGLGRWRWRADGLGALGLAALIGLPGLALYVGARWMGMSVQVIPASLDDTWWRLPVLVLSAFANGWAEE VVVIAYLQTRLHQLGYGTAAAIVSSALLRGCYHLYQGVSAGVGNLAMGVVFGYVWHRTGRLWPLVVAHGVIDTVAFVGYA LLRDHLGWLH >Mature_249_residues AESEMSARTIRLEIAIVLAISFGMSAFSAILQFASAVLMGLSGQRVALNPRRAELSLIDLGLNLVSITRLVAWGALAVYL LWRSGFRPSSVGLGRWRWRADGLGALGLAALIGLPGLALYVGARWMGMSVQVIPASLDDTWWRLPVLVLSAFANGWAEEV VVIAYLQTRLHQLGYGTAAAIVSSALLRGCYHLYQGVSAGVGNLAMGVVFGYVWHRTGRLWPLVVAHGVIDTVAFVGYAL LRDHLGWLH
Specific function: Unknown
COG id: COG1266
COG function: function code R; Predicted metal-dependent membrane protease
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27011; Mature: 26880
Theoretical pI: Translated: 10.10; Mature: 10.10
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAESEMSARTIRLEIAIVLAISFGMSAFSAILQFASAVLMGLSGQRVALNPRRAELSLID CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHH LGLNLVSITRLVAWGALAVYLLWRSGFRPSSVGLGRWRWRADGLGALGLAALIGLPGLAL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCHHHH YVGARWMGMSVQVIPASLDDTWWRLPVLVLSAFANGWAEEVVVIAYLQTRLHQLGYGTAA HHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH AIVSSALLRGCYHLYQGVSAGVGNLAMGVVFGYVWHRTGRLWPLVVAHGVIDTVAFVGYA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LLRDHLGWLH HHHHHHCCCC >Mature Secondary Structure AESEMSARTIRLEIAIVLAISFGMSAFSAILQFASAVLMGLSGQRVALNPRRAELSLID CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHH LGLNLVSITRLVAWGALAVYLLWRSGFRPSSVGLGRWRWRADGLGALGLAALIGLPGLAL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEECCCCCCHHHHHHHHCCCHHHH YVGARWMGMSVQVIPASLDDTWWRLPVLVLSAFANGWAEEVVVIAYLQTRLHQLGYGTAA HHHHHHHCCEEEEEECCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCHHH AIVSSALLRGCYHLYQGVSAGVGNLAMGVVFGYVWHRTGRLWPLVVAHGVIDTVAFVGYA HHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH LLRDHLGWLH HHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA