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The map label for this gene is sodA [H]

Identifier: 169627223

GI number: 169627223

Start: 117899

End: 118522

Strand: Reverse

Name: sodA [H]

Synonym: MAB_0118c

Alternate gene names: 169627223

Gene position: 118522-117899 (Counterclockwise)

Preceding gene: 169627224

Following gene: 169627222

Centisome position: 2.34

GC content: 61.7

Gene sequence:

>624_bases
GTGGCTGAGTACACACTGCCCGATTTGGACTATGACTACGGAGCGCTGGAGCCCCACATCTCGGGACAGATCAACGAGCT
GCACCACAGTAAGCACCACGCGACCTACGTCAAGGGTGTTAACGACGCTGTTGCCAAGTTGGAGGAGGCCCGCGAAAAGG
GCGACCACGCCGCGATCTTCCTCAACGAGAAGAACCTGGCGTTCCACCTCGGCGGCCACGTGAACCACTCGATCTGGTGG
AAGAACCTGTCCCCCAACGGCGGTGACAAGCCGACCGGCGATCTGGCCGCCGCCATCGACGATCAGTTCGGTTCGTTCGA
CAAGTTCCAGGCACAGTTCACCGCCGCGGCCAACGGTCTGCAGGGCTCGGGCTGGGCCGTGCTCGGTTACGACAGCCTCG
GACAGAAGCTGCTGACCTTCCAGCTGTACGACCAGCAGGCCAATGTCCCTCTGGGCATCATCCCGCTGCTCCAGGTCGAC
ATGTGGGAGCACGCCTTCTACCTTCAGTACAAGAACGTCAAGGCCGACTACGTGAAGGCATTCTGGAACGTGGTCAACTG
GGCCGACGTGCAGGACCGCTACACCGCGGCCACCACCAAGACGTCGGGCCTGATCTTCGGCTGA

Upstream 100 bases:

>100_bases
CCGGCACTCCGGTTCGAAGAGGTTTAGCCGTGTCTTCTGTTGGATAGATCTGCCGATAACGCAGATACGAGCGATTACGA
CGCAAGCGGAAAGGAATCTC

Downstream 100 bases:

>100_bases
TCTCACGCACCGCTTGGGCCCCGGGTTCGCTTGCGAATCCGGGGCCCACGCATTTTTCGGCGTGTCCGCTAGCGATTGCG
GGGTGATTCCGCGCATGGTA

Product: superoxide dismutase (Mn)

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MAEYTLPDLDYDYGALEPHISGQINELHHSKHHATYVKGVNDAVAKLEEAREKGDHAAIFLNEKNLAFHLGGHVNHSIWW
KNLSPNGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGQKLLTFQLYDQQANVPLGIIPLLQVD
MWEHAFYLQYKNVKADYVKAFWNVVNWADVQDRYTAATTKTSGLIFG

Sequences:

>Translated_207_residues
MAEYTLPDLDYDYGALEPHISGQINELHHSKHHATYVKGVNDAVAKLEEAREKGDHAAIFLNEKNLAFHLGGHVNHSIWW
KNLSPNGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGQKLLTFQLYDQQANVPLGIIPLLQVD
MWEHAFYLQYKNVKADYVKAFWNVVNWADVQDRYTAATTKTSGLIFG
>Mature_206_residues
AEYTLPDLDYDYGALEPHISGQINELHHSKHHATYVKGVNDAVAKLEEAREKGDHAAIFLNEKNLAFHLGGHVNHSIWWK
NLSPNGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGLQGSGWAVLGYDSLGQKLLTFQLYDQQANVPLGIIPLLQVDM
WEHAFYLQYKNVKADYVKAFWNVVNWADVQDRYTAATTKTSGLIFG

Specific function: Destroys radicals which are normally produced within the cells and which are toxic to biological systems [H]

COG id: COG0605

COG function: function code P; Superoxide dismutase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the iron/manganese superoxide dismutase family [H]

Homologues:

Organism=Homo sapiens, GI67782307, Length=199, Percent_Identity=54.2713567839196, Blast_Score=217, Evalue=4e-57,
Organism=Homo sapiens, GI67782305, Length=199, Percent_Identity=54.2713567839196, Blast_Score=217, Evalue=4e-57,
Organism=Homo sapiens, GI67782309, Length=199, Percent_Identity=43.7185929648241, Blast_Score=157, Evalue=9e-39,
Organism=Escherichia coli, GI1790342, Length=208, Percent_Identity=42.3076923076923, Blast_Score=144, Evalue=6e-36,
Organism=Escherichia coli, GI1787946, Length=196, Percent_Identity=39.7959183673469, Blast_Score=131, Evalue=4e-32,
Organism=Caenorhabditis elegans, GI17506561, Length=197, Percent_Identity=46.1928934010152, Blast_Score=186, Evalue=8e-48,
Organism=Caenorhabditis elegans, GI17569479, Length=197, Percent_Identity=44.6700507614213, Blast_Score=174, Evalue=2e-44,
Organism=Saccharomyces cerevisiae, GI6321796, Length=205, Percent_Identity=49.2682926829268, Blast_Score=189, Evalue=3e-49,
Organism=Drosophila melanogaster, GI17136812, Length=196, Percent_Identity=45.9183673469388, Blast_Score=185, Evalue=2e-47,

Paralogues:

None

Copy number: 2980 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001189
- InterPro:   IPR019833
- InterPro:   IPR019832
- InterPro:   IPR019831 [H]

Pfam domain/function: PF02777 Sod_Fe_C; PF00081 Sod_Fe_N [H]

EC number: =1.15.1.1 [H]

Molecular weight: Translated: 23026; Mature: 22895

Theoretical pI: Translated: 5.72; Mature: 5.72

Prosite motif: PS00088 SOD_MN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEYTLPDLDYDYGALEPHISGQINELHHSKHHATYVKGVNDAVAKLEEAREKGDHAAIF
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE
LNEKNLAFHLGGHVNHSIWWKNLSPNGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGL
EECCCEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCC
QGSGWAVLGYDSLGQKLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVKA
CCCCEEEEEHHHHCCEEEEEEEECCCCCCCEEEHHHEEHHHHCEEEEEEECCCCHHHHHH
FWNVVNWADVQDRYTAATTKTSGLIFG
HHHHHCCCCCCCCEEEEECCCCCEECC
>Mature Secondary Structure 
AEYTLPDLDYDYGALEPHISGQINELHHSKHHATYVKGVNDAVAKLEEAREKGDHAAIF
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCEEEEE
LNEKNLAFHLGGHVNHSIWWKNLSPNGGDKPTGDLAAAIDDQFGSFDKFQAQFTAAANGL
EECCCEEEEECCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHCCCC
QGSGWAVLGYDSLGQKLLTFQLYDQQANVPLGIIPLLQVDMWEHAFYLQYKNVKADYVKA
CCCCEEEEEHHHHCCEEEEEEEECCCCCCCEEEHHHEEHHHHCEEEEEEECCCCHHHHHH
FWNVVNWADVQDRYTAATTKTSGLIFG
HHHHHCCCCCCCCEEEEECCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8692009 [H]