| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627219
Identifier: 169627219
GI number: 169627219
Start: 114403
End: 115518
Strand: Direct
Name: 169627219
Synonym: MAB_0114
Alternate gene names: NA
Gene position: 114403-115518 (Clockwise)
Preceding gene: 169627218
Following gene: 169627221
Centisome position: 2.26
GC content: 63.62
Gene sequence:
>1116_bases GTGATCGCCTGGGTTATTGCCGGGCTGCTGGGTATGGCGACGGGTCTGCGCATCGGGTGGGTGCTCGTCCACAAGCAATC CCCGGTCAGCACCGGAATGATTGTCGCCCTGGGAAGCCTGGCACTGGTATCGGCGCTGAACTGGGAACCGCTGACGATCT TGGTGGACAGCTCGCTGGGTTGGCCCAACATCTCGGTAGCGCTGAGCCAGGCCGCCTTGACGGCTTGCGCGGCCGGCAGT TGCGTGATGATCACGAGCATGTCCGCCAGCCGTACCGCGGTGGCCAACAAGCGATGGGCGCGCTGGCAGTACCTGGCCGC CACCGTGATTGGCGGCGCGAGCCTCGCGGTGTTCTTCTCCCGTGGCCGGCAGCCGGAGATGACCCCTCGTGAATTTCTGA AGCGCGATCTGGGTGGATTTGCATCCGGCACGGCCTGGTTGGTCCCCATGCTGTACATCGCGGTGGCCCTGTCGGTGGTG CTGTGGGCGGGGATGGCCTATTCGAATCGGACCCGGCGCGGTCGTGCCCTTTTCCTTTTCACTGTCGGGATCAGTCTCCT TGTACTGGCAGTGCTGGTGGTGGCGGGCGTCGCGGTGGCCCAGTCCGAATATGTCACCATCGGTACCGCGGCCACATTGA TCGGCTGTGCGATGGCGATGGTGGCAGTGGGCGCGCTGCTACCAACATTTGAAACCTGGCTGGTCGCGCGACGCGAGATG TTTGTGCTGGCCCCGTTGTACAAGGACCTGAAGAAGCGCCAGCCGGACGCCGCGATTGGTGTGCGGCCCCGTGGGCCTTT GGCCTTCCAGGTGGCGGACCGCATGGCCTATATCTCGGACGCGCTCTTCCTGGAGGCGATGCATGCCCAGGGCCTCGACC CCGAATCAGAGGGTGAGGGCGATATCGAGCTGGGTGTGGAGCCCGTCAAACTCGATGTGCTTCCCGCGGCGCAGGCTCAT GCCGTAGTGAAATGGGTTCTCACCGAAGGTGATCCGAAGGAAAACTTCCCAGGCCCGGAATGGCTACACCAGCCTGACGG ATACTCCGATCGCGAATGGATTCTCGCGATCGCTACCGAGTACCGCAGGCTGGTGCGTGCCGAACATCGTTCTTGA
Upstream 100 bases:
>100_bases AGGAGGCCGAGGACTTCGCGGCGCTGTTGTTGTATCGGCTTGGCCGGCTGCCCTCCGACCGCGCGTCCATCGTTCAGGTG AGGCTCGGGGAGGCCTTTGG
Downstream 100 bases:
>100_bases GTTGTAAAGTCCCGTCCCGCTGTGCGTCCCCCGCCGGCTCGACGAGCGGTGAACGCCAAACTGGCCGGTCCTTCCCCGAG TGGACCGGCCAGACAAGCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MIAWVIAGLLGMATGLRIGWVLVHKQSPVSTGMIVALGSLALVSALNWEPLTILVDSSLGWPNISVALSQAALTACAAGS CVMITSMSASRTAVANKRWARWQYLAATVIGGASLAVFFSRGRQPEMTPREFLKRDLGGFASGTAWLVPMLYIAVALSVV LWAGMAYSNRTRRGRALFLFTVGISLLVLAVLVVAGVAVAQSEYVTIGTAATLIGCAMAMVAVGALLPTFETWLVARREM FVLAPLYKDLKKRQPDAAIGVRPRGPLAFQVADRMAYISDALFLEAMHAQGLDPESEGEGDIELGVEPVKLDVLPAAQAH AVVKWVLTEGDPKENFPGPEWLHQPDGYSDREWILAIATEYRRLVRAEHRS
Sequences:
>Translated_371_residues MIAWVIAGLLGMATGLRIGWVLVHKQSPVSTGMIVALGSLALVSALNWEPLTILVDSSLGWPNISVALSQAALTACAAGS CVMITSMSASRTAVANKRWARWQYLAATVIGGASLAVFFSRGRQPEMTPREFLKRDLGGFASGTAWLVPMLYIAVALSVV LWAGMAYSNRTRRGRALFLFTVGISLLVLAVLVVAGVAVAQSEYVTIGTAATLIGCAMAMVAVGALLPTFETWLVARREM FVLAPLYKDLKKRQPDAAIGVRPRGPLAFQVADRMAYISDALFLEAMHAQGLDPESEGEGDIELGVEPVKLDVLPAAQAH AVVKWVLTEGDPKENFPGPEWLHQPDGYSDREWILAIATEYRRLVRAEHRS >Mature_371_residues MIAWVIAGLLGMATGLRIGWVLVHKQSPVSTGMIVALGSLALVSALNWEPLTILVDSSLGWPNISVALSQAALTACAAGS CVMITSMSASRTAVANKRWARWQYLAATVIGGASLAVFFSRGRQPEMTPREFLKRDLGGFASGTAWLVPMLYIAVALSVV LWAGMAYSNRTRRGRALFLFTVGISLLVLAVLVVAGVAVAQSEYVTIGTAATLIGCAMAMVAVGALLPTFETWLVARREM FVLAPLYKDLKKRQPDAAIGVRPRGPLAFQVADRMAYISDALFLEAMHAQGLDPESEGEGDIELGVEPVKLDVLPAAQAH AVVKWVLTEGDPKENFPGPEWLHQPDGYSDREWILAIATEYRRLVRAEHRS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39985; Mature: 39985
Theoretical pI: Translated: 8.45; Mature: 8.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAWVIAGLLGMATGLRIGWVLVHKQSPVSTGMIVALGSLALVSALNWEPLTILVDSSLG CHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC WPNISVALSQAALTACAAGSCVMITSMSASRTAVANKRWARWQYLAATVIGGASLAVFFS CCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHH RGRQPEMTPREFLKRDLGGFASGTAWLVPMLYIAVALSVVLWAGMAYSNRTRRGRALFLF CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEH TVGISLLVLAVLVVAGVAVAQSEYVTIGTAATLIGCAMAMVAVGALLPTFETWLVARREM HHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVLAPLYKDLKKRQPDAAIGVRPRGPLAFQVADRMAYISDALFLEAMHAQGLDPESEGEG HEEHHHHHHHHHCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DIELGVEPVKLDVLPAAQAHAVVKWVLTEGDPKENFPGPEWLHQPDGYSDREWILAIATE CEEECCEEEEEEEECCHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH YRRLVRAEHRS HHHHHHHHCCC >Mature Secondary Structure MIAWVIAGLLGMATGLRIGWVLVHKQSPVSTGMIVALGSLALVSALNWEPLTILVDSSLG CHHHHHHHHHHHHHCCEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCC WPNISVALSQAALTACAAGSCVMITSMSASRTAVANKRWARWQYLAATVIGGASLAVFFS CCCHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHHCCHHHHHHHHHHHHHCCHHHHHHHH RGRQPEMTPREFLKRDLGGFASGTAWLVPMLYIAVALSVVLWAGMAYSNRTRRGRALFLF CCCCCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHCCCCCCCCEEEEH TVGISLLVLAVLVVAGVAVAQSEYVTIGTAATLIGCAMAMVAVGALLPTFETWLVARREM HHHHHHHHHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FVLAPLYKDLKKRQPDAAIGVRPRGPLAFQVADRMAYISDALFLEAMHAQGLDPESEGEG HEEHHHHHHHHHCCCCCEECCCCCCCEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCC DIELGVEPVKLDVLPAAQAHAVVKWVLTEGDPKENFPGPEWLHQPDGYSDREWILAIATE CEEECCEEEEEEEECCHHHHHEEEEEEECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHH YRRLVRAEHRS HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA