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The map label for this gene is polX [H]

Identifier: 169627202

GI number: 169627202

Start: 97901

End: 98911

Strand: Direct

Name: polX [H]

Synonym: MAB_0097

Alternate gene names: 169627202

Gene position: 97901-98911 (Clockwise)

Preceding gene: 169627201

Following gene: 169627203

Centisome position: 1.93

GC content: 64.0

Gene sequence:

>1011_bases
ATGGATCCCGTCTCGGCACTCAGGGAGATCGCGTATTACAAAGAACTCGCTCGCGAGGAATCCCGGCGGGTTATGGCCTA
CCGCAAGGCCGCAGAGATCATCGCCGGGCTCAGTCCTCAAGAGCGAGAACGCCATGGCGCCAACAAGACGTGGAAGAGCC
TGACCGGTCTTGGGCCAAAGACGGCGACGGTCGCGGCCGAGGCATGGGCGGGAAAGGTCCCGGCCACGCTCGAACAACTG
CGGGCCAATGCCAAGAGCACCGGTGGGGGAGCGATGCGTGAAGCGCTCAAAGGTGACCTGCATCTGCACTCCAACTGGTC
AGATGGCTCGGTGCCCATCGAGGAAATGATGAGTACCGCCAAGGCGCTCGGGCACGAATACTGTGCGCTCACTGACCATT
CGCCCCGCCTTCGGGTCGCTAACGGGTTGTCGGCCGACCGGCTGCGCACCCAGCTGGCGGTGATCGACGGTATGCGAGAG
CAGATGGCGCCCATGCGCATTCTTACCGGAATCGAGGTCGACATCCTCGACGACGGCGACCTGGATCAGGACCCTGAGCT
CCTTGAGCAGCTCGATATCGTTGTGGCGAGCGTGCACTCCAAGCTGGCGATGGACGCCGACGCGATGACCCGACGCATGA
TCGCCGCCGTCACCAACCCACGGGTGGATGTGCTGGGGCACTGCACGGGCAGGTTGGTAGAGGGGGAGCGCGGCACCCGC
GGAGAGTCGAAATTCGATGCCGCAGAGGTGTTCCGGGCCTGCCGTGATTCCGGAACCGCCATCGAGATCAACTCGCGACC
AGAACGCAGGGACCCGCCGCGGCGGTTGCTCGACCTGGCGCTGAATATCGGCTGCGATTTCTCCATCGATACCGACGCGC
ACGCACCTGGGCAGTTGGAATTTTCCGGATACGGCTGCGAGCGTGCCCTGGAGGCGGGCGTTCCGGAGGATCGGGTGATC
AATACCTGGCCGGTCGACCAGTTGCTGGCCTGGACACGGCAAGGCCGGTAA

Upstream 100 bases:

>100_bases
GCCGAACCCGACGAACTGGCGACGCTGACCGCGGACATCGAGGACTACCCGCCGGAAATCTTTGATGAGGAGTTGGCGGT
TCGCGCCTAGAGTCCAGGAC

Downstream 100 bases:

>100_bases
GCACTTCTTGACACTTTGAACACTTTCGCGCAATGTGTTCAAGCATGAAGCTCGTAAAGACGACGGGCCCGCGCGGTGAG
GTGCCTGAACCCATCGTCGC

Product: hypothetical protein

Products: NA

Alternate protein names: DNA polymerase type-X; 3'-5' exodeoxyribonuclease; 3'-5' exonuclease [H]

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MDPVSALREIAYYKELAREESRRVMAYRKAAEIIAGLSPQERERHGANKTWKSLTGLGPKTATVAAEAWAGKVPATLEQL
RANAKSTGGGAMREALKGDLHLHSNWSDGSVPIEEMMSTAKALGHEYCALTDHSPRLRVANGLSADRLRTQLAVIDGMRE
QMAPMRILTGIEVDILDDGDLDQDPELLEQLDIVVASVHSKLAMDADAMTRRMIAAVTNPRVDVLGHCTGRLVEGERGTR
GESKFDAAEVFRACRDSGTAIEINSRPERRDPPRRLLDLALNIGCDFSIDTDAHAPGQLEFSGYGCERALEAGVPEDRVI
NTWPVDQLLAWTRQGR

Sequences:

>Translated_336_residues
MDPVSALREIAYYKELAREESRRVMAYRKAAEIIAGLSPQERERHGANKTWKSLTGLGPKTATVAAEAWAGKVPATLEQL
RANAKSTGGGAMREALKGDLHLHSNWSDGSVPIEEMMSTAKALGHEYCALTDHSPRLRVANGLSADRLRTQLAVIDGMRE
QMAPMRILTGIEVDILDDGDLDQDPELLEQLDIVVASVHSKLAMDADAMTRRMIAAVTNPRVDVLGHCTGRLVEGERGTR
GESKFDAAEVFRACRDSGTAIEINSRPERRDPPRRLLDLALNIGCDFSIDTDAHAPGQLEFSGYGCERALEAGVPEDRVI
NTWPVDQLLAWTRQGR
>Mature_336_residues
MDPVSALREIAYYKELAREESRRVMAYRKAAEIIAGLSPQERERHGANKTWKSLTGLGPKTATVAAEAWAGKVPATLEQL
RANAKSTGGGAMREALKGDLHLHSNWSDGSVPIEEMMSTAKALGHEYCALTDHSPRLRVANGLSADRLRTQLAVIDGMRE
QMAPMRILTGIEVDILDDGDLDQDPELLEQLDIVVASVHSKLAMDADAMTRRMIAAVTNPRVDVLGHCTGRLVEGERGTR
GESKFDAAEVFRACRDSGTAIEINSRPERRDPPRRLLDLALNIGCDFSIDTDAHAPGQLEFSGYGCERALEAGVPEDRVI
NTWPVDQLLAWTRQGR

Specific function: Strictly DNA-template-directed DNA polymerase, preferentially acting on DNA structures containing gaps from one to a few nucleotides and bearing a phosphate group at the 5' end of the downstream DNA. The fact that PolX is able to conduct filling of a sing

COG id: COG1387

COG function: function code ER; Histidinol phosphatase and related hydrolases of the PHP family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: In the C-terminal section; belongs to the PHP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002054
- InterPro:   IPR010996
- InterPro:   IPR003583
- InterPro:   IPR004013
- InterPro:   IPR003141
- InterPro:   IPR016195
- InterPro:   IPR022311 [H]

Pfam domain/function: PF02811 PHP [H]

EC number: =2.7.7.7 [H]

Molecular weight: Translated: 36861; Mature: 36861

Theoretical pI: Translated: 5.49; Mature: 5.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDPVSALREIAYYKELAREESRRVMAYRKAAEIIAGLSPQERERHGANKTWKSLTGLGPK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHCCCCC
TATVAAEAWAGKVPATLEQLRANAKSTGGGAMREALKGDLHLHSNWSDGSVPIEEMMSTA
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCEEEECCCCCCCCCHHHHHHHH
KALGHEYCALTDHSPRLRVANGLSADRLRTQLAVIDGMREQMAPMRILTGIEVDILDDGD
HHHCCCEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
LDQDPELLEQLDIVVASVHSKLAMDADAMTRRMIAAVTNPRVDVLGHCTGRLVEGERGTR
CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCCCCC
GESKFDAAEVFRACRDSGTAIEINSRPERRDPPRRLLDLALNIGCDFSIDTDAHAPGQLE
CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
FSGYGCERALEAGVPEDRVINTWPVDQLLAWTRQGR
ECCCCHHHHHHCCCCCCCEECCCCHHHHHHHHHCCC
>Mature Secondary Structure
MDPVSALREIAYYKELAREESRRVMAYRKAAEIIAGLSPQERERHGANKTWKSLTGLGPK
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHCCCCHHHHHHHCCCCC
TATVAAEAWAGKVPATLEQLRANAKSTGGGAMREALKGDLHLHSNWSDGSVPIEEMMSTA
HHHHHHHHHCCCCHHHHHHHHHCCCCCCCHHHHHHHHCCEEEECCCCCCCCCHHHHHHHH
KALGHEYCALTDHSPRLRVANGLSADRLRTQLAVIDGMREQMAPMRILTGIEVDILDDGD
HHHCCCEEEECCCCCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCC
LDQDPELLEQLDIVVASVHSKLAMDADAMTRRMIAAVTNPRVDVLGHCTGRLVEGERGTR
CCCCHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHCCCCHHHHHHCCCCEECCCCCCC
GESKFDAAEVFRACRDSGTAIEINSRPERRDPPRRLLDLALNIGCDFSIDTDAHAPGQLE
CCCHHHHHHHHHHHHCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCEEE
FSGYGCERALEAGVPEDRVINTWPVDQLLAWTRQGR
ECCCCHHHHHHCCCCCCCEECCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969504; 9384377 [H]