| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is gluP [H]
Identifier: 169627133
GI number: 169627133
Start: 25546
End: 26409
Strand: Direct
Name: gluP [H]
Synonym: MAB_0026
Alternate gene names: 169627133
Gene position: 25546-26409 (Clockwise)
Preceding gene: 169627132
Following gene: 169627137
Centisome position: 0.5
GC content: 68.63
Gene sequence:
>864_bases ATGGCTCATCCCGGTCAGGTCCCGGTCTACGGGTGCGCTTGGCACCCGGACCGGGCCACCGCGGTGCGCTGCGTGCGGTG CGGGCGCCCCGTGTGTCCGGCCTGCATGCGGTCGGCGCCCGTGGGGCAGCAGTGTGTCGAATGCGTCCAGCAGGGCGCCA AGTCGGTGCGCCAGGTCAAGCCGCTGCAGCAGGTGCGAGCCTGGATCACCTGGGCGCTGATTGCCGTCAACGTCCTGGTG TACACGGCGACGGTGTCCGATGGCGTGGGCGGCGATGTCACGGGCAGCCAGCTATTCCGGGAGCTGGTGTTGTACCTGCC CTGGGTGGCCCAGGGTGAACTGTGGCGGACCGTCACGACGGGCTTCTTGCATCTGGGTCTGATGCATATCGCCGTCAACA TGCTGTCGCTGGCCATGATCGGACCGGGCCTTGAGCGGGCGTTCGGCGGCCAGCGGTATGCGGCGATCTATGGCACCGCA TTGCTCGGCAGTAGCGCCGCGGCCATGTGGCTCAGCCCAAACGCCGTGGTAGCAGGAGCATCGGGCGCCATCTATGGCCT GCTGGGTGCGGCGCTCGTGTTGTCTCTGCGCGAGCGGCTGAACCCGCAGACCATCATCATCGTGCTGCTGCTCAACATCG GCCTGAGCATCTCGCTGCCGGGCATCTCGCTGGCCGGGCACATGGGTGGGCTGCTGTTCGGCGTGCTCAGCGCGGGCGCG CTGCTGTACTACCGCGAGGTGTGCCGGGGCATAGGCATGCCCGACCTCGCGCGCAAGGCGTCGACACCGTGGGTGCTGGC GGCCGTGGTGGCCGCGCTCTCGGTCGCCCTGATCATGGCGAAGGTGCTGGCCTACGCGGGTTGA
Upstream 100 bases:
>100_bases ACAGCAGGTCGTCGACTCCATCGCCTCCACCGCCGTCGATCGCGGCGACCGTCCCACCGAGGATGTCGTGATCAACTCGA TCACCATCAGCTAGGTCTCG
Downstream 100 bases:
>100_bases GTCACGGCAGAACAAGCCGCACCGTGCAGGCTCATAACGGGTGAGCTCGAGGCCTGTTATCGGGTAGCGGTGATGAAGTA GGCGTCGGACCACAGCGAGG
Product: rhomboid family protein
Products: NA
Alternate protein names: Intramembrane serine protease [H]
Number of amino acids: Translated: 287; Mature: 286
Protein sequence:
>287_residues MAHPGQVPVYGCAWHPDRATAVRCVRCGRPVCPACMRSAPVGQQCVECVQQGAKSVRQVKPLQQVRAWITWALIAVNVLV YTATVSDGVGGDVTGSQLFRELVLYLPWVAQGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTA LLGSSAAAMWLSPNAVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHMGGLLFGVLSAGA LLYYREVCRGIGMPDLARKASTPWVLAAVVAALSVALIMAKVLAYAG
Sequences:
>Translated_287_residues MAHPGQVPVYGCAWHPDRATAVRCVRCGRPVCPACMRSAPVGQQCVECVQQGAKSVRQVKPLQQVRAWITWALIAVNVLV YTATVSDGVGGDVTGSQLFRELVLYLPWVAQGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTA LLGSSAAAMWLSPNAVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHMGGLLFGVLSAGA LLYYREVCRGIGMPDLARKASTPWVLAAVVAALSVALIMAKVLAYAG >Mature_286_residues AHPGQVPVYGCAWHPDRATAVRCVRCGRPVCPACMRSAPVGQQCVECVQQGAKSVRQVKPLQQVRAWITWALIAVNVLVY TATVSDGVGGDVTGSQLFRELVLYLPWVAQGELWRTVTTGFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTAL LGSSAAAMWLSPNAVVAGASGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHMGGLLFGVLSAGAL LYYREVCRGIGMPDLARKASTPWVLAAVVAALSVALIMAKVLAYAG
Specific function: Rhomboid-type serine protease that catalyzes intramembrane proteolysis. Important for normal cell division and sporulation. May act as a glucose exporter [H]
COG id: COG0705
COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 TPR repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002610 - InterPro: IPR022764 - InterPro: IPR001440 - InterPro: IPR013026 - InterPro: IPR011990 - InterPro: IPR019734 [H]
Pfam domain/function: PF01694 Rhomboid; PF00515 TPR_1 [H]
EC number: =3.4.21.105 [H]
Molecular weight: Translated: 30129; Mature: 29998
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAHPGQVPVYGCAWHPDRATAVRCVRCGRPVCPACMRSAPVGQQCVECVQQGAKSVRQVK CCCCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH PLQQVRAWITWALIAVNVLVYTATVSDGVGGDVTGSQLFRELVLYLPWVAQGELWRTVTT HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH GFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMWLSPNAVVAGA HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCEEEECC SGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHMGGLLFGVLSAGA CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHH LLYYREVCRGIGMPDLARKASTPWVLAAVVAALSVALIMAKVLAYAG HHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure AHPGQVPVYGCAWHPDRATAVRCVRCGRPVCPACMRSAPVGQQCVECVQQGAKSVRQVK CCCCCCCEEEECCCCCHHHHHHHHHCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHH PLQQVRAWITWALIAVNVLVYTATVSDGVGGDVTGSQLFRELVLYLPWVAQGELWRTVTT HHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHH GFLHLGLMHIAVNMLSLAMIGPGLERAFGGQRYAAIYGTALLGSSAAAMWLSPNAVVAGA HHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCHHHHHHHHHHHCCCCCEEEECCCEEEECC SGAIYGLLGAALVLSLRERLNPQTIIIVLLLNIGLSISLPGISLAGHMGGLLFGVLSAGA CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCEEECCCCHHHHHHHHHHHHHHHHHH LLYYREVCRGIGMPDLARKASTPWVLAAVVAALSVALIMAKVLAYAG HHHHHHHHHHCCCCHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]