| Definition | Mycobacterium abscessus ATCC 19977 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_010397 |
| Length | 5,067,172 |
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The map label for this gene is 169627117
Identifier: 169627117
GI number: 169627117
Start: 9849
End: 10436
Strand: Direct
Name: 169627117
Synonym: MAB_0009
Alternate gene names: NA
Gene position: 9849-10436 (Clockwise)
Preceding gene: 169627116
Following gene: 169627122
Centisome position: 0.19
GC content: 58.33
Gene sequence:
>588_bases ATGAACAAGCAAGCAGGGGCACTAGCGCTGGCAGTGCTGGGCCTGGCGATGGGATGCCAGTCGCAAAAGACAGAGCCCTC CGGAGCATCGTCGAGCTCCCCGGAGCCCACAGCCACCACGTCTTCATCCTCATCGGAGGCGAAAACTTCTGGCTTCCAAC CATTTACCCCCACGACCGATGCCTGCAGCCTTGTTGCTCCGGAGCAACTGAATTCACAAGGCACCGCGCCGATCACCTCG CGCGCCAGGGAGTCGTCGAACAGGATTGTTCAGTGCTCATATAAGGAAGCTGGCGGCCATGAGGTGTTGAACATCAAGCT GTTCAAGAATTCGGATGGGGCGGCCAACTTCCGGTCGATTCACGTCCGGATTCTCGAATCCGAGGGCGCACAAATTTACG TTATGAAGGATGAGCCGAACGAATGTGAGGCGGGGTTGGTGAACTCCGAGGACAACATCGTGCAGTTCGAATTCGAGCCT GGAGACGCAGCGGTCTCTTCGGCGGCGCTACCTGCTGGCCAAACGTGGTGTGATTTCTCTGCGCCGGTGCTCGCGGAAGC GAACAAGAAGCTGGGCTGGACCAAGTAG
Upstream 100 bases:
>100_bases GGCATGGAAGAGGAGAAGCCTCCGCCGTTACTGACACCCAGCGATCTCGAAGAAGACGATTTCTATCAGTTCAACAATCC GTTCGGTCCGAGGAAGTGAT
Downstream 100 bases:
>100_bases AAGTAAAGCCTTTGGGTGACTGCGCTAGTTACCCAAAGGCTTTACTTCTCACTCGAATTCGACGTCCCAGCCGAGTTTCT TGTACCGCCGCTTCTCGCGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 195; Mature: 195
Protein sequence:
>195_residues MNKQAGALALAVLGLAMGCQSQKTEPSGASSSSPEPTATTSSSSSEAKTSGFQPFTPTTDACSLVAPEQLNSQGTAPITS RARESSNRIVQCSYKEAGGHEVLNIKLFKNSDGAANFRSIHVRILESEGAQIYVMKDEPNECEAGLVNSEDNIVQFEFEP GDAAVSSAALPAGQTWCDFSAPVLAEANKKLGWTK
Sequences:
>Translated_195_residues MNKQAGALALAVLGLAMGCQSQKTEPSGASSSSPEPTATTSSSSSEAKTSGFQPFTPTTDACSLVAPEQLNSQGTAPITS RARESSNRIVQCSYKEAGGHEVLNIKLFKNSDGAANFRSIHVRILESEGAQIYVMKDEPNECEAGLVNSEDNIVQFEFEP GDAAVSSAALPAGQTWCDFSAPVLAEANKKLGWTK >Mature_195_residues MNKQAGALALAVLGLAMGCQSQKTEPSGASSSSPEPTATTSSSSSEAKTSGFQPFTPTTDACSLVAPEQLNSQGTAPITS RARESSNRIVQCSYKEAGGHEVLNIKLFKNSDGAANFRSIHVRILESEGAQIYVMKDEPNECEAGLVNSEDNIVQFEFEP GDAAVSSAALPAGQTWCDFSAPVLAEANKKLGWTK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20461; Mature: 20461
Theoretical pI: Translated: 4.59; Mature: 4.59
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.6 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKQAGALALAVLGLAMGCQSQKTEPSGASSSSPEPTATTSSSSSEAKTSGFQPFTPTTD CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC ACSLVAPEQLNSQGTAPITSRARESSNRIVQCSYKEAGGHEVLNIKLFKNSDGAANFRSI CEEEECHHHHCCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEEEE HVRILESEGAQIYVMKDEPNECEAGLVNSEDNIVQFEFEPGDAAVSSAALPAGQTWCDFS EEEEEECCCCEEEEECCCCCCCCCCEECCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCC APVLAEANKKLGWTK CCHHHCCCCCCCCCC >Mature Secondary Structure MNKQAGALALAVLGLAMGCQSQKTEPSGASSSSPEPTATTSSSSSEAKTSGFQPFTPTTD CCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCC ACSLVAPEQLNSQGTAPITSRARESSNRIVQCSYKEAGGHEVLNIKLFKNSDGAANFRSI CEEEECHHHHCCCCCCCHHHHHHHCCCCEEEEEECCCCCCEEEEEEEEECCCCCCCEEEE HVRILESEGAQIYVMKDEPNECEAGLVNSEDNIVQFEFEPGDAAVSSAALPAGQTWCDFS EEEEEECCCCEEEEECCCCCCCCCCEECCCCCEEEEEECCCCHHHHHCCCCCCCCCCCCC APVLAEANKKLGWTK CCHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA