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The map label for this gene is ybhE [C]

Identifier: 169834524

GI number: 169834524

Start: 1491869

End: 1492882

Strand: Direct

Name: ybhE [C]

Synonym: SPH_1617

Alternate gene names: 169834524

Gene position: 1491869-1492882 (Clockwise)

Preceding gene: 169834179

Following gene: 169832669

Centisome position: 66.43

GC content: 42.5

Gene sequence:

>1014_bases
ATGAAAGAAACTGTTTATTTTGGAACTTATACACGTCGTACTTCTCAAGGGATTTACAAGGCAGACTTTGATACAGAAAC
TGGTCAGCTTTCAAATCTAGAACTTTTTGCAGCTGAGCCAAGTCCAACCTACCTTGCCTTTGACCAGCACCAACATTTAT
ACACTGTTGGTAGCCAAGACGATAAGGGGGGAATTGCAGCCTATCAAACTGACGGGACTGTGTTAAATCATGTTGTTGAA
GAAGGAGCTCCCCACTGTTATGTTGCTGTTGATGAAAAGCGTGATTTGGTTTACGCAGCCAACTATCACAAGGGACAAGT
CCTTGTTTATAAACGCCAGGAAGATGGTAGTCTTCTACTTAGTGATATGGATCAACACAGTGGCCAAGGTCCACATGAAA
ATCAAGCTTCCCCCCATGTTCACTATACAGATTTAACACCTGACCACTATCTAGTGACCTGCGACTTGGGAACTGACCAA
GTCATCACCTATGACCTCGATCAAGAAGGAAAATTATCTAAGCTCTATACCTATCACAGCAAGCCAGGAGCAGGCTCACG
CCATATCATTTTCCATAACCACTATAAAATCGCTTATCTCATTTGTGAACTCAATAGTACTATCGAAGTTTTAATCTACG
ATGGCGTTGGCGAATTTGTACGTATGCAGGTTATTTCAACTTTACCAGAAGCTTACGAAGGCTTTAATGGAACCGCTGCT
ATTCATCTCTCTAAAGACGGTAAATACCTCTACGCTTCTAACCGTGGCCATGATTCTATCGCAGTATATACCATCCTTGC
GGACGGTAGCTTAGAGTTATTAGAAATCGTTCCAACGCATGGTCAGACTCCACGTGATTTTGATTTGACACCCGACCAAA
AATTTCTCATTGTTGTCCATCAAGACTCTGACAATGCAACTGTCTTTAAACGTAATTGTGACAATGGTCGTCTAGCAGAA
CTCTCCAACGACTTCCATGTTCCCGAAGCAGTCTGCATCCGTTTTGCTCCTTAA

Upstream 100 bases:

>100_bases
ACAAAATAACTCTTTTTTAAAGTGCTTACATCTAATTGAATGTCTTTAATTTGCTTGTTTTTGTGATATAATAGTCTTAT
CTTTACACAGAGGTATAGTA

Downstream 100 bases:

>100_bases
AACACCATAAAAAATGAACTTGGTATTTTCAAGTTCATTTTTTCTTATAGTCTATTTCCGACATTAATACGGTTAATGGC
ACGTTGCAAAGCAATCTTAG

Product: 3-carboxymuconate cyclase

Products: NA

Alternate protein names: ORFB [H]

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MKETVYFGTYTRRTSQGIYKADFDTETGQLSNLELFAAEPSPTYLAFDQHQHLYTVGSQDDKGGIAAYQTDGTVLNHVVE
EGAPHCYVAVDEKRDLVYAANYHKGQVLVYKRQEDGSLLLSDMDQHSGQGPHENQASPHVHYTDLTPDHYLVTCDLGTDQ
VITYDLDQEGKLSKLYTYHSKPGAGSRHIIFHNHYKIAYLICELNSTIEVLIYDGVGEFVRMQVISTLPEAYEGFNGTAA
IHLSKDGKYLYASNRGHDSIAVYTILADGSLELLEIVPTHGQTPRDFDLTPDQKFLIVVHQDSDNATVFKRNCDNGRLAE
LSNDFHVPEAVCIRFAP

Sequences:

>Translated_337_residues
MKETVYFGTYTRRTSQGIYKADFDTETGQLSNLELFAAEPSPTYLAFDQHQHLYTVGSQDDKGGIAAYQTDGTVLNHVVE
EGAPHCYVAVDEKRDLVYAANYHKGQVLVYKRQEDGSLLLSDMDQHSGQGPHENQASPHVHYTDLTPDHYLVTCDLGTDQ
VITYDLDQEGKLSKLYTYHSKPGAGSRHIIFHNHYKIAYLICELNSTIEVLIYDGVGEFVRMQVISTLPEAYEGFNGTAA
IHLSKDGKYLYASNRGHDSIAVYTILADGSLELLEIVPTHGQTPRDFDLTPDQKFLIVVHQDSDNATVFKRNCDNGRLAE
LSNDFHVPEAVCIRFAP
>Mature_337_residues
MKETVYFGTYTRRTSQGIYKADFDTETGQLSNLELFAAEPSPTYLAFDQHQHLYTVGSQDDKGGIAAYQTDGTVLNHVVE
EGAPHCYVAVDEKRDLVYAANYHKGQVLVYKRQEDGSLLLSDMDQHSGQGPHENQASPHVHYTDLTPDHYLVTCDLGTDQ
VITYDLDQEGKLSKLYTYHSKPGAGSRHIIFHNHYKIAYLICELNSTIEVLIYDGVGEFVRMQVISTLPEAYEGFNGTAA
IHLSKDGKYLYASNRGHDSIAVYTILADGSLELLEIVPTHGQTPRDFDLTPDQKFLIVVHQDSDNATVFKRNCDNGRLAE
LSNDFHVPEAVCIRFAP

Specific function: Unknown

COG id: COG2706

COG function: function code G; 3-carboxymuconate cyclase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cycloisomerase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786983, Length=333, Percent_Identity=27.9279279279279, Blast_Score=90, Evalue=2e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011048
- InterPro:   IPR019405
- InterPro:   IPR015943 [H]

Pfam domain/function: PF10282 DUF2394 [H]

EC number: NA

Molecular weight: Translated: 37727; Mature: 37727

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKETVYFGTYTRRTSQGIYKADFDTETGQLSNLELFAAEPSPTYLAFDQHQHLYTVGSQD
CCCEEEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEECCCC
DKGGIAAYQTDGTVLNHVVEEGAPHCYVAVDEKRDLVYAANYHKGQVLVYKRQEDGSLLL
CCCCEEEEECCCHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEE
SDMDQHSGQGPHENQASPHVHYTDLTPDHYLVTCDLGTDQVITYDLDQEGKLSKLYTYHS
ECCHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEC
KPGAGSRHIIFHNHYKIAYLICELNSTIEVLIYDGVGEFVRMQVISTLPEAYEGFNGTAA
CCCCCCEEEEEECCEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHCHHHHCCCCCEEE
IHLSKDGKYLYASNRGHDSIAVYTILADGSLELLEIVPTHGQTPRDFDLTPDQKFLIVVH
EEEECCCCEEEECCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEE
QDSDNATVFKRNCDNGRLAELSNDFHVPEAVCIRFAP
ECCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEECC
>Mature Secondary Structure
MKETVYFGTYTRRTSQGIYKADFDTETGQLSNLELFAAEPSPTYLAFDQHQHLYTVGSQD
CCCEEEEEEEECCCCCCCEEECCCCCCCCCCCEEEEEECCCCCEEEEECCCEEEEECCCC
DKGGIAAYQTDGTVLNHVVEEGAPHCYVAVDEKRDLVYAANYHKGQVLVYKRQEDGSLLL
CCCCEEEEECCCHHHHHHHHCCCCEEEEEEECCCCEEEEECCCCCEEEEEEECCCCCEEE
SDMDQHSGQGPHENQASPHVHYTDLTPDHYLVTCDLGTDQVITYDLDQEGKLSKLYTYHS
ECCHHHCCCCCCCCCCCCEEEEECCCCCCEEEEEECCCCEEEEEECCCCCCEEEEEEEEC
KPGAGSRHIIFHNHYKIAYLICELNSTIEVLIYDGVGEFVRMQVISTLPEAYEGFNGTAA
CCCCCCEEEEEECCEEEEEEEEECCCEEEEEEECCCCHHHHHHHHHHCHHHHCCCCCEEE
IHLSKDGKYLYASNRGHDSIAVYTILADGSLELLEIVPTHGQTPRDFDLTPDQKFLIVVH
EEEECCCCEEEECCCCCCCEEEEEEEECCCEEEEEEECCCCCCCCCCCCCCCCEEEEEEE
QDSDNATVFKRNCDNGRLAELSNDFHVPEAVCIRFAP
ECCCCCEEEEECCCCCEEEECCCCCCCCCEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9620952 [H]