Click here to switch to the map view.

The map label for this gene is 169834448

Identifier: 169834448

GI number: 169834448

Start: 1145865

End: 1146701

Strand: Direct

Name: 169834448

Synonym: SPH_1239

Alternate gene names: NA

Gene position: 1145865-1146701 (Clockwise)

Preceding gene: 169832964

Following gene: 169833742

Centisome position: 51.03

GC content: 30.82

Gene sequence:

>837_bases
ATGTTTTCAAATGCGAATAGCTTTAAAGCAAAAATCAAAAATATTTCAAAAGATAAGGGAATTCCAGCTCAACAAGTACA
ACAACATTATTTAATTGAGCAAGTGTTAAAGCTGATTTCTACTAGTTCTTATAGAGATTCCTTCATTGTAAAAGGAGGGT
ATCTAATAGGTCAAATGATTGGACTAGATAAGCGAACCACAATGGATTTAGATGTCACTCTGAAGGGAACCGAAATGAGC
AGAGAAAATTTGATTGATATCTTTGAAGAGATTCTTTGTTCTAAAACTGATGGTTTTTCATTTTCAGTAGATAAGCTAGA
ACCTATTCGCCAAGATGATGAATATGGAGGATTTTCATTAAAATTAAATGCAACTTTTGATACATTAAAGGAGGTTGTTT
TTATTGATATTACTACTGGTGATAAGATCACACCAAGAGAAATTACTTATTCAATGACTTCTATCTTTACTAATGAAAGC
ATCAAGATATGGACATATAATCTAGAAACTGTACTTGCTGAAAAGTTAGAAACAATCATTAGTAGGGGATTAGCTTCAAC
ACGCCCACGTGATCGATATGATCTTTTCACCTTGTATAAACTTAGAAAAGAAGAGATTAATCTTGAAGTATTAAAAAATG
CACTTGAAAATACAGCAAAAAAACGTAAAAGTAAAGATACTATTTATAATTGGGAAGAACAAGTGAGAGGAATTGAAATT
TCTGATTATCAGAAAGAGCTATGGATTCGTTATCAACGCCAATTTAAGTATGCTAAAGATATCTCATTTGATAACTCTGT
TCAGGTTATTAGGGAAATTATGCAACAAATATTTTAG

Upstream 100 bases:

>100_bases
ATTTTCAACAGAATCAAATTCATTTACACAAATTATTTTATTATGCCCAACTATTTAAAGTAACTGATAAGTTACAATCT
TATACGGAGGTGCTATCTTA

Downstream 100 bases:

>100_bases
TACAAAAGCAACTCATTCGTAAATCAGTGAGTTGCTTTTGTATTCCAATAACCTCAAAAATGTGATAAAAATTTCAACTA
CTCTTATCTATAATAAAGCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 278; Mature: 278

Protein sequence:

>278_residues
MFSNANSFKAKIKNISKDKGIPAQQVQQHYLIEQVLKLISTSSYRDSFIVKGGYLIGQMIGLDKRTTMDLDVTLKGTEMS
RENLIDIFEEILCSKTDGFSFSVDKLEPIRQDDEYGGFSLKLNATFDTLKEVVFIDITTGDKITPREITYSMTSIFTNES
IKIWTYNLETVLAEKLETIISRGLASTRPRDRYDLFTLYKLRKEEINLEVLKNALENTAKKRKSKDTIYNWEEQVRGIEI
SDYQKELWIRYQRQFKYAKDISFDNSVQVIREIMQQIF

Sequences:

>Translated_278_residues
MFSNANSFKAKIKNISKDKGIPAQQVQQHYLIEQVLKLISTSSYRDSFIVKGGYLIGQMIGLDKRTTMDLDVTLKGTEMS
RENLIDIFEEILCSKTDGFSFSVDKLEPIRQDDEYGGFSLKLNATFDTLKEVVFIDITTGDKITPREITYSMTSIFTNES
IKIWTYNLETVLAEKLETIISRGLASTRPRDRYDLFTLYKLRKEEINLEVLKNALENTAKKRKSKDTIYNWEEQVRGIEI
SDYQKELWIRYQRQFKYAKDISFDNSVQVIREIMQQIF
>Mature_278_residues
MFSNANSFKAKIKNISKDKGIPAQQVQQHYLIEQVLKLISTSSYRDSFIVKGGYLIGQMIGLDKRTTMDLDVTLKGTEMS
RENLIDIFEEILCSKTDGFSFSVDKLEPIRQDDEYGGFSLKLNATFDTLKEVVFIDITTGDKITPREITYSMTSIFTNES
IKIWTYNLETVLAEKLETIISRGLASTRPRDRYDLFTLYKLRKEEINLEVLKNALENTAKKRKSKDTIYNWEEQVRGIEI
SDYQKELWIRYQRQFKYAKDISFDNSVQVIREIMQQIF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32454; Mature: 32454

Theoretical pI: Translated: 7.33; Mature: 7.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSNANSFKAKIKNISKDKGIPAQQVQQHYLIEQVLKLISTSSYRDSFIVKGGYLIGQMI
CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHH
GLDKRTTMDLDVTLKGTEMSRENLIDIFEEILCSKTDGFSFSVDKLEPIRQDDEYGGFSL
CCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCCCCCEEE
KLNATFDTLKEVVFIDITTGDKITPREITYSMTSIFTNESIKIWTYNLETVLAEKLETII
EEECCHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHH
SRGLASTRPRDRYDLFTLYKLRKEEINLEVLKNALENTAKKRKSKDTIYNWEEQVRGIEI
HCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCH
SDYQKELWIRYQRQFKYAKDISFDNSVQVIREIMQQIF
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC
>Mature Secondary Structure
MFSNANSFKAKIKNISKDKGIPAQQVQQHYLIEQVLKLISTSSYRDSFIVKGGYLIGQMI
CCCCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEECCHHHHHHH
GLDKRTTMDLDVTLKGTEMSRENLIDIFEEILCSKTDGFSFSVDKLEPIRQDDEYGGFSL
CCCCCCEEEEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEHHHCCCCCCCCCCCCEEE
KLNATFDTLKEVVFIDITTGDKITPREITYSMTSIFTNESIKIWTYNLETVLAEKLETII
EEECCHHHHCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEECHHHHHHHHHHHHH
SRGLASTRPRDRYDLFTLYKLRKEEINLEVLKNALENTAKKRKSKDTIYNWEEQVRGIEI
HCCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHCCCCH
SDYQKELWIRYQRQFKYAKDISFDNSVQVIREIMQQIF
HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA