| Definition | Streptococcus pneumoniae Hungary19A-6, complete genome. |
|---|---|
| Accession | NC_010380 |
| Length | 2,245,615 |
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The map label for this gene is 169834289
Identifier: 169834289
GI number: 169834289
Start: 1931131
End: 1933146
Strand: Direct
Name: 169834289
Synonym: SPH_2097
Alternate gene names: NA
Gene position: 1931131-1933146 (Clockwise)
Preceding gene: 169833812
Following gene: 169832837
Centisome position: 86.0
GC content: 40.08
Gene sequence:
>2016_bases ATGAAAAAATTATTTATACTCATATCCAACCTGCTTGCTAGTTTGTTCTTTGTTTGGGTATTTACCATTTGGACTGATAC ATATGTCTCCCATTATTACCCCAACGTTGTTGTACATGATTCTTCCCCTGAAACAACTTTTCAGCATGTTGCTACACGCT TGGAAAAACTAGCAGAAGAAACAGATAGCTTTATTGCGATTCAACACCAAGATCCTAACTCAGAAGGTACTACAGTTTTT TCTTATACGACCTTTGGAGACGGAAAGTTGCCTGACGGGCTACAGGAAAAAAAACTAGAAGATGCTCAAAGTAGTAGTGT TGAAACAAACTATTTTGTATTCGATGGACACCTAGATATTCACTTGCTAAGGGAGGAGCTAAGTCAACTTGGCTTGACTA ATATGCACCTGACAATTCCATCTAAACTATCTACGTTAATGGCTATCTTTAGTAACGGATTTCAGTTAATCAGTCTATTG ATTTTCATCTTAACCTTTGGAGCACTGACTTTAATTAGTCAAATTAGCCAATTACGGTCGTCGGGCATTCGCCTCATTTC AGGAGAGAAACGGTGGTCCATTTTTCTTAGACCAGTTGGTGAGGATTTGAAAGGGATAGCTGTTGGTTTCAGTTTAGCTG GCGTGCTCACCATTCTTATGCAAAAAATTCTGTCGCTTCCAACGCAATCCCTAATGACCATAGGAGCAGGCTTGCTCAGT TATAATCTCATCTTGTTGTCTATCTCCCTGTTTTTCGCTCAACTCTTCGCAGTTGGGATAAAAAAGATACACCTGATGCA GATTATAAAAGGGCAAGTGCCTGTCAGAGGAATCATTAGTTTGATTTTAATCGGTCAACTATTAGCGATTATTATTGTAA CACTGGGAATAGGGAGTAGCTTAAAGTATTCCCAAGCCTGGCAACAGCATCGGATTGGACAAGAGGCTTGGAGCCAGGAA AGGCAACTGATTACCCTATCAATCAGCCGTGAAGGAACGAGTCCTGGTTTTGATGAACAAGCTCAAAGGAAACTCAGAAC TTGGTATCAATTGATGGATCTGGCTGTTTCAGAACAAAAGGCTTTCTTATCTAGACACCAGTTAATTGACCGTACTTTGC AAAATGGCATGGCTTCCTCCAAAAACTTTATAACCTCTACAGAATGGCACGATTACAGCCCGAATGGCAATGTCCTTATC GTCACACCGCAATACTTGGAGCGTCAAAACATTCCTGTAGATACAACTATTGAGCAAAAGATGAATCACCTTGATGTAGG GGAGTTTGTCTTATTGCTGCCTGAACACCTCCGTTCAGAGGAAGATCATTATAAATCTGTTTTTGAAGACGACTTAACCA GTCGCATGTCTAGTCAAGATGAACGACAGCAAATGACTGCTACGGTAGGTTATTTAGAATCAGGTCAGGATCGTTTTGTG TATAATACGACCCCTATTTCTTACCAGCAGTTTTTGAAAGATCCAATCATCATTGTTATAACACCCCAATCAACTGGTCC ACAGTCCATTTTGTTTTGGATAGACGCAGTACAGAACTACGTTCTCTTTAATCAATTGTCTGATGCCCAGGAGCTTATCC AGAGACAAGGCATTGAAAATTGGGTCTCAGAAATGCAAACAGGTTACCACAACTACATCACATTATTGGATAATATCCAG AGGGAACGTTGGGTAATGCTAGCAGGAGCTGTGCTTGGGATTGCAACTTCAATCTTGCTGTTTAACACTATGAATAGGCT CTACTTTGAAGAATTTAGACGTGCCATTTTTATCAAACGCATTGCAGGTCTCAGGTTCTTAGAAATCCATCGCACTTATC TCTTTGCTCAACTGGGTGTGTTTTTACTGGGATTTGTTGCTAGTGTATTTCTTCAGGTAGAAATAGGAGTTGCTTTCTTA GTCTTGTTACTCTTTACTGGTCTATCTCTTTTACAGTTACATGTCCAAATGCAGAAAGAAAACAAGATGTCCATGCTTGT TTTGAAGGGAGGTTAA
Upstream 100 bases:
>100_bases AATAATTGAAGAAGATTCTTTTATCAATAGTTTAGTAAGCTTGTTAGTTTATAGAGGGCAGGGGTATTTCTGCCCTCTGT TTTAGAATAAGGAATGCACT
Downstream 100 bases:
>100_bases TATGATTGAACTTAAACAGGTGAGTAAATCTTTTGGAGAACGAGAGTTATTTTCGAATCTTTCAATGACATTTGAGGCTG GAAAAGTCTATGCCTTAATT
Product: bacteriocin-associated integral membrane protein
Products: NA
Alternate protein names: Immunity Protein; Bacteriocine Associated ABC Transporter Permease; Bacteriocin-Associated Membrane Protein
Number of amino acids: Translated: 671; Mature: 671
Protein sequence:
>671_residues MKKLFILISNLLASLFFVWVFTIWTDTYVSHYYPNVVVHDSSPETTFQHVATRLEKLAEETDSFIAIQHQDPNSEGTTVF SYTTFGDGKLPDGLQEKKLEDAQSSSVETNYFVFDGHLDIHLLREELSQLGLTNMHLTIPSKLSTLMAIFSNGFQLISLL IFILTFGALTLISQISQLRSSGIRLISGEKRWSIFLRPVGEDLKGIAVGFSLAGVLTILMQKILSLPTQSLMTIGAGLLS YNLILLSISLFFAQLFAVGIKKIHLMQIIKGQVPVRGIISLILIGQLLAIIIVTLGIGSSLKYSQAWQQHRIGQEAWSQE RQLITLSISREGTSPGFDEQAQRKLRTWYQLMDLAVSEQKAFLSRHQLIDRTLQNGMASSKNFITSTEWHDYSPNGNVLI VTPQYLERQNIPVDTTIEQKMNHLDVGEFVLLLPEHLRSEEDHYKSVFEDDLTSRMSSQDERQQMTATVGYLESGQDRFV YNTTPISYQQFLKDPIIIVITPQSTGPQSILFWIDAVQNYVLFNQLSDAQELIQRQGIENWVSEMQTGYHNYITLLDNIQ RERWVMLAGAVLGIATSILLFNTMNRLYFEEFRRAIFIKRIAGLRFLEIHRTYLFAQLGVFLLGFVASVFLQVEIGVAFL VLLLFTGLSLLQLHVQMQKENKMSMLVLKGG
Sequences:
>Translated_671_residues MKKLFILISNLLASLFFVWVFTIWTDTYVSHYYPNVVVHDSSPETTFQHVATRLEKLAEETDSFIAIQHQDPNSEGTTVF SYTTFGDGKLPDGLQEKKLEDAQSSSVETNYFVFDGHLDIHLLREELSQLGLTNMHLTIPSKLSTLMAIFSNGFQLISLL IFILTFGALTLISQISQLRSSGIRLISGEKRWSIFLRPVGEDLKGIAVGFSLAGVLTILMQKILSLPTQSLMTIGAGLLS YNLILLSISLFFAQLFAVGIKKIHLMQIIKGQVPVRGIISLILIGQLLAIIIVTLGIGSSLKYSQAWQQHRIGQEAWSQE RQLITLSISREGTSPGFDEQAQRKLRTWYQLMDLAVSEQKAFLSRHQLIDRTLQNGMASSKNFITSTEWHDYSPNGNVLI VTPQYLERQNIPVDTTIEQKMNHLDVGEFVLLLPEHLRSEEDHYKSVFEDDLTSRMSSQDERQQMTATVGYLESGQDRFV YNTTPISYQQFLKDPIIIVITPQSTGPQSILFWIDAVQNYVLFNQLSDAQELIQRQGIENWVSEMQTGYHNYITLLDNIQ RERWVMLAGAVLGIATSILLFNTMNRLYFEEFRRAIFIKRIAGLRFLEIHRTYLFAQLGVFLLGFVASVFLQVEIGVAFL VLLLFTGLSLLQLHVQMQKENKMSMLVLKGG >Mature_671_residues MKKLFILISNLLASLFFVWVFTIWTDTYVSHYYPNVVVHDSSPETTFQHVATRLEKLAEETDSFIAIQHQDPNSEGTTVF SYTTFGDGKLPDGLQEKKLEDAQSSSVETNYFVFDGHLDIHLLREELSQLGLTNMHLTIPSKLSTLMAIFSNGFQLISLL IFILTFGALTLISQISQLRSSGIRLISGEKRWSIFLRPVGEDLKGIAVGFSLAGVLTILMQKILSLPTQSLMTIGAGLLS YNLILLSISLFFAQLFAVGIKKIHLMQIIKGQVPVRGIISLILIGQLLAIIIVTLGIGSSLKYSQAWQQHRIGQEAWSQE RQLITLSISREGTSPGFDEQAQRKLRTWYQLMDLAVSEQKAFLSRHQLIDRTLQNGMASSKNFITSTEWHDYSPNGNVLI VTPQYLERQNIPVDTTIEQKMNHLDVGEFVLLLPEHLRSEEDHYKSVFEDDLTSRMSSQDERQQMTATVGYLESGQDRFV YNTTPISYQQFLKDPIIIVITPQSTGPQSILFWIDAVQNYVLFNQLSDAQELIQRQGIENWVSEMQTGYHNYITLLDNIQ RERWVMLAGAVLGIATSILLFNTMNRLYFEEFRRAIFIKRIAGLRFLEIHRTYLFAQLGVFLLGFVASVFLQVEIGVAFL VLLLFTGLSLLQLHVQMQKENKMSMLVLKGG
Specific function: Unknown
COG id: COG4652
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 76170; Mature: 76170
Theoretical pI: Translated: 6.47; Mature: 6.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKLFILISNLLASLFFVWVFTIWTDTYVSHYYPNVVVHDSSPETTFQHVATRLEKLAEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHC TDSFIAIQHQDPNSEGTTVFSYTTFGDGKLPDGLQEKKLEDAQSSSVETNYFVFDGHLDI CCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHH HLLREELSQLGLTNMHLTIPSKLSTLMAIFSNGFQLISLLIFILTFGALTLISQISQLRS HHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SGIRLISGEKRWSIFLRPVGEDLKGIAVGFSLAGVLTILMQKILSLPTQSLMTIGAGLLS CCCEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YNLILLSISLFFAQLFAVGIKKIHLMQIIKGQVPVRGIISLILIGQLLAIIIVTLGIGSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC LKYSQAWQQHRIGQEAWSQERQLITLSISREGTSPGFDEQAQRKLRTWYQLMDLAVSEQK CCHHHHHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AFLSRHQLIDRTLQNGMASSKNFITSTEWHDYSPNGNVLIVTPQYLERQNIPVDTTIEQK HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHCCCCCCCCCCHHHH MNHLDVGEFVLLLPEHLRSEEDHYKSVFEDDLTSRMSSQDERQQMTATVGYLESGQDRFV HCCCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEE YNTTPISYQQFLKDPIIIVITPQSTGPQSILFWIDAVQNYVLFNQLSDAQELIQRQGIEN EECCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH WVSEMQTGYHNYITLLDNIQRERWVMLAGAVLGIATSILLFNTMNRLYFEEFRRAIFIKR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGLRFLEIHRTYLFAQLGVFLLGFVASVFLQVEIGVAFLVLLLFTGLSLLQLHVQMQKE HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NKMSMLVLKGG CCEEEEEEECC >Mature Secondary Structure MKKLFILISNLLASLFFVWVFTIWTDTYVSHYYPNVVVHDSSPETTFQHVATRLEKLAEE CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHC TDSFIAIQHQDPNSEGTTVFSYTTFGDGKLPDGLQEKKLEDAQSSSVETNYFVFDGHLDI CCCEEEEEECCCCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHCCCCCCEEEEEECCCHH HLLREELSQLGLTNMHLTIPSKLSTLMAIFSNGFQLISLLIFILTFGALTLISQISQLRS HHHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH SGIRLISGEKRWSIFLRPVGEDLKGIAVGFSLAGVLTILMQKILSLPTQSLMTIGAGLLS CCCEEEECCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHH YNLILLSISLFFAQLFAVGIKKIHLMQIIKGQVPVRGIISLILIGQLLAIIIVTLGIGSS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC LKYSQAWQQHRIGQEAWSQERQLITLSISREGTSPGFDEQAQRKLRTWYQLMDLAVSEQK CCHHHHHHHHCCCHHHHCCCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH AFLSRHQLIDRTLQNGMASSKNFITSTEWHDYSPNGNVLIVTPQYLERQNIPVDTTIEQK HHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEECHHHHCCCCCCCCCCHHHH MNHLDVGEFVLLLPEHLRSEEDHYKSVFEDDLTSRMSSQDERQQMTATVGYLESGQDRFV HCCCCHHHHHHHCCHHHCCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCEE YNTTPISYQQFLKDPIIIVITPQSTGPQSILFWIDAVQNYVLFNQLSDAQELIQRQGIEN EECCCCCHHHHHHCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH WVSEMQTGYHNYITLLDNIQRERWVMLAGAVLGIATSILLFNTMNRLYFEEFRRAIFIKR HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IAGLRFLEIHRTYLFAQLGVFLLGFVASVFLQVEIGVAFLVLLLFTGLSLLQLHVQMQKE HHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NKMSMLVLKGG CCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA