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The map label for this gene is 169834274

Identifier: 169834274

GI number: 169834274

Start: 261655

End: 263124

Strand: Direct

Name: 169834274

Synonym: SPH_0300

Alternate gene names: NA

Gene position: 261655-263124 (Clockwise)

Preceding gene: 169834169

Following gene: 169833853

Centisome position: 11.65

GC content: 39.52

Gene sequence:

>1470_bases
ATGGAGCAAGAACACCCTCCTAGAACGATGAAGGAGCTTGAAAATCGTATCTTTAAAGCTGGAGAAGAATGGCGGGCAGA
ACATACTGAAACTAAGGTAAATGAGAACACAGGGGACGTTACCGAAAAGGTTGCCATGCCCCAAACCTTCACAGTAGCTA
AAATACTGAGCGAGATTGTCACATTTACTTTTATCAGCAAGAGCAATATACCTGATTATAGCCTACTCTATATCTATGAT
TTAGACGAGGGTATCTATACCGCTAGTAATGATCTATTCAATCTTTTGTGTAAGACCTTTGACGTTAGAATTAAACCCAG
AGAGTGGCCACAGATTAAGTTAATGGTTAGAACATTGGCAAAGATACGAAAACCTTTAGAAAGTGCTAACCTCATTCCCG
TACAGAACGGCATTATCAACTTAGAAACTAAGGAACTACTCCCCTTTAGTCCTAAGTATGTAATTACAAGTAAGATAAGC
ACGGCCTACCACGCGCCTAAACGAGTCCCAACAGATAGAGAGGGAAAAACTTTTGATGATTGGTTGAACTCAATCGCTTG
TAATGATAGTGAACTGGTAACACTGTTTTGGCAGATTATCCTTGAAGCTATTAACCCTAACCATACTCGAAATAAGTTTG
CTATCTTCTACGGGGACGGTAACAATGGTAAAGGGACATTTCAGCGCTTCCTTATCAACCTGATAGGGGAAAGCAATATA
TCAGCCTTAAAGCCTGCACAGTTTGCTGAAAAGCATAACTTGGAGACCTTGGTAGGTAAGGTTTGTAATATTGGGGATGA
AGCACCTAACGAATACTTAAAAAATCCGTCTGATTTAATGAGTATCACTAGTGGCGACACTGTTCTAGTCAATCCAAAAG
GACGCCCAGCCTTTGAAGCTACTTTCAAGTTATTCAATATCTTTTCAGGGAATTATATCCCCAATGGTGGCAACAAGACA
AAAGGCTGGTATCGTAGAATTATGATTGTCCCTTTTAATGCTGACTTTAACGGGGAGAAGGAAAAACCTTGGATAAAAAA
TGAGTTTTTAGCAAACAAGGAAGTCCTAGAATATGCCCTCTACAAAGCTATCAATCAAGAGCCATTTACTCACTTTATCG
AACCTAAAGCAGTTAAAGGACTCCTAGAAGAATACCAGGAAGATAATGACTACTTACTTTCATGGGTTAAGCATGAATAC
ATGGAAAAAGGTTGGCATGAGCTGGACGTAGTACCTGTTTTTATCGTTACAAGATCACTAAAGCACTATGCCGAAGATAT
GGGAATACCCAAGCCCAATGTTTACGGGGCTGGTAAAGAAACTATCAAGCACTTACAACAGTTGACACCTAATCGGTATT
CTCTAAGAAAGAAAAGAGTTTCTCCAGAAGATTTTGAAAAACTAGAGGCATGGGACGTTGACAAGATAAAAATGCGGACA
CCTCAACACTCTATCACTAAACAAGAATAA

Upstream 100 bases:

>100_bases
CGCACTTTTAGCAGTATAGCACGGGCTGAATATAGAAAGAGAGGTTAGAACCATAGAACTAGAAGAATTAGCAAACCTAA
AAAGTGAAATCTTGGAGGTA

Downstream 100 bases:

>100_bases
GTGTGACGTTCTTTTTTTGCTTAAACCCTTGATAATACTGATTTTCTTGAAAAAAGTGTGACGTTGTGTGACGTTCTCAA
AAAAGAAGGTCACACCCCTT

Product: prophage Sa05, P4 family DNA primase

Products: NA

Alternate protein names: Primase; Phage Primase; Phage/Plasmid Primase P4 Family; P4 Family Phage/Plasmid Primase; Phage Replication Protein; Phage DNA Primase; Phage Associated Protein; Prophage Lp4 DNA Primase/Helicase; P4-Specific DNA Primase; Prophage; Plasmid/Phage Primase; Nucleoside Triphosphatase D5 Family; DNA Primase Domain-Containing Protein; Replication Protein; Phage-Related DNA Primase; ATPase; Prophage Lsa1 DNA Primase; Phage DNA Polymerase; Phage-Related DNA Primase/Helicase; Phage/Plasmid Primase; Primase Superantigen-Encoding Pathogenicity Islands SaPI; Prophage DNA Primase

Number of amino acids: Translated: 489; Mature: 489

Protein sequence:

>489_residues
MEQEHPPRTMKELENRIFKAGEEWRAEHTETKVNENTGDVTEKVAMPQTFTVAKILSEIVTFTFISKSNIPDYSLLYIYD
LDEGIYTASNDLFNLLCKTFDVRIKPREWPQIKLMVRTLAKIRKPLESANLIPVQNGIINLETKELLPFSPKYVITSKIS
TAYHAPKRVPTDREGKTFDDWLNSIACNDSELVTLFWQIILEAINPNHTRNKFAIFYGDGNNGKGTFQRFLINLIGESNI
SALKPAQFAEKHNLETLVGKVCNIGDEAPNEYLKNPSDLMSITSGDTVLVNPKGRPAFEATFKLFNIFSGNYIPNGGNKT
KGWYRRIMIVPFNADFNGEKEKPWIKNEFLANKEVLEYALYKAINQEPFTHFIEPKAVKGLLEEYQEDNDYLLSWVKHEY
MEKGWHELDVVPVFIVTRSLKHYAEDMGIPKPNVYGAGKETIKHLQQLTPNRYSLRKKRVSPEDFEKLEAWDVDKIKMRT
PQHSITKQE

Sequences:

>Translated_489_residues
MEQEHPPRTMKELENRIFKAGEEWRAEHTETKVNENTGDVTEKVAMPQTFTVAKILSEIVTFTFISKSNIPDYSLLYIYD
LDEGIYTASNDLFNLLCKTFDVRIKPREWPQIKLMVRTLAKIRKPLESANLIPVQNGIINLETKELLPFSPKYVITSKIS
TAYHAPKRVPTDREGKTFDDWLNSIACNDSELVTLFWQIILEAINPNHTRNKFAIFYGDGNNGKGTFQRFLINLIGESNI
SALKPAQFAEKHNLETLVGKVCNIGDEAPNEYLKNPSDLMSITSGDTVLVNPKGRPAFEATFKLFNIFSGNYIPNGGNKT
KGWYRRIMIVPFNADFNGEKEKPWIKNEFLANKEVLEYALYKAINQEPFTHFIEPKAVKGLLEEYQEDNDYLLSWVKHEY
MEKGWHELDVVPVFIVTRSLKHYAEDMGIPKPNVYGAGKETIKHLQQLTPNRYSLRKKRVSPEDFEKLEAWDVDKIKMRT
PQHSITKQE
>Mature_489_residues
MEQEHPPRTMKELENRIFKAGEEWRAEHTETKVNENTGDVTEKVAMPQTFTVAKILSEIVTFTFISKSNIPDYSLLYIYD
LDEGIYTASNDLFNLLCKTFDVRIKPREWPQIKLMVRTLAKIRKPLESANLIPVQNGIINLETKELLPFSPKYVITSKIS
TAYHAPKRVPTDREGKTFDDWLNSIACNDSELVTLFWQIILEAINPNHTRNKFAIFYGDGNNGKGTFQRFLINLIGESNI
SALKPAQFAEKHNLETLVGKVCNIGDEAPNEYLKNPSDLMSITSGDTVLVNPKGRPAFEATFKLFNIFSGNYIPNGGNKT
KGWYRRIMIVPFNADFNGEKEKPWIKNEFLANKEVLEYALYKAINQEPFTHFIEPKAVKGLLEEYQEDNDYLLSWVKHEY
MEKGWHELDVVPVFIVTRSLKHYAEDMGIPKPNVYGAGKETIKHLQQLTPNRYSLRKKRVSPEDFEKLEAWDVDKIKMRT
PQHSITKQE

Specific function: Unknown

COG id: COG3378

COG function: function code R; Predicted ATPase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 56405; Mature: 56405

Theoretical pI: Translated: 7.12; Mature: 7.12

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEQEHPPRTMKELENRIFKAGEEWRAEHTETKVNENTGDVTEKVAMPQTFTVAKILSEIV
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHH
TFTFISKSNIPDYSLLYIYDLDEGIYTASNDLFNLLCKTFDVRIKPREWPQIKLMVRTLA
HHHHEECCCCCCEEEEEEEECCCCCEECHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHH
KIRKPLESANLIPVQNGIINLETKELLPFSPKYVITSKISTAYHAPKRVPTDREGKTFDD
HHHHHHHHCCEEEECCCEEEEEHHHCCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCHHH
WLNSIACNDSELVTLFWQIILEAINPNHTRNKFAIFYGDGNNGKGTFQRFLINLIGESNI
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCC
SALKPAQFAEKHNLETLVGKVCNIGDEAPNEYLKNPSDLMSITSGDTVLVNPKGRPAFEA
CCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCHHHHHEECCCCEEEECCCCCCHHHH
TFKLFNIFSGNYIPNGGNKTKGWYRRIMIVPFNADFNGEKEKPWIKNEFLANKEVLEYAL
HHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHH
YKAINQEPFTHFIEPKAVKGLLEEYQEDNDYLLSWVKHEYMEKGWHELDVVPVFIVTRSL
HHHHCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KHYAEDMGIPKPNVYGAGKETIKHLQQLTPNRYSLRKKRVSPEDFEKLEAWDVDKIKMRT
HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCEEECC
PQHSITKQE
CCCCCCCCC
>Mature Secondary Structure
MEQEHPPRTMKELENRIFKAGEEWRAEHTETKVNENTGDVTEKVAMPQTFTVAKILSEIV
CCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHCCCCHHHHHHHHHHHH
TFTFISKSNIPDYSLLYIYDLDEGIYTASNDLFNLLCKTFDVRIKPREWPQIKLMVRTLA
HHHHEECCCCCCEEEEEEEECCCCCEECHHHHHHHHHHHHCCEECCCCCCHHHHHHHHHH
KIRKPLESANLIPVQNGIINLETKELLPFSPKYVITSKISTAYHAPKRVPTDREGKTFDD
HHHHHHHHCCEEEECCCEEEEEHHHCCCCCCCEEEEECHHHHHCCCCCCCCCCCCCCHHH
WLNSIACNDSELVTLFWQIILEAINPNHTRNKFAIFYGDGNNGKGTFQRFLINLIGESNI
HHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCC
SALKPAQFAEKHNLETLVGKVCNIGDEAPNEYLKNPSDLMSITSGDTVLVNPKGRPAFEA
CCCCCHHHHHHCCHHHHHHHHHCCCCCCCHHHHCCHHHHHEECCCCEEEECCCCCCHHHH
TFKLFNIFSGNYIPNGGNKTKGWYRRIMIVPFNADFNGEKEKPWIKNEFLANKEVLEYAL
HHHHHHHHCCCCCCCCCCCCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHCCHHHHHHHH
YKAINQEPFTHFIEPKAVKGLLEEYQEDNDYLLSWVKHEYMEKGWHELDVVPVFIVTRSL
HHHHCCCCHHHHCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
KHYAEDMGIPKPNVYGAGKETIKHLQQLTPNRYSLRKKRVSPEDFEKLEAWDVDKIKMRT
HHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHCCCCCEEECC
PQHSITKQE
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA