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The map label for this gene is yitL [H]

Identifier: 169834062

GI number: 169834062

Start: 970160

End: 971053

Strand: Direct

Name: yitL [H]

Synonym: SPH_1050

Alternate gene names: 169834062

Gene position: 970160-971053 (Clockwise)

Preceding gene: 169832481

Following gene: 169833457

Centisome position: 43.2

GC content: 44.52

Gene sequence:

>894_bases
TTGGCATTGCTGGCTGAGTTTTATTCGAAAGAAGGAAATATGAATACAAATCTTGCAAGTTTTATCGTTGGACTGATCAT
CGATGAAAACGACCGTTTTTACTTTGTGCAAAAGGATGGTCAAACCTATGCTCTTGCTAAGGAAGAAGGCCAACATACAG
TAGGGGATACGGTCAAAGGTTTTGCATACACGGATATGAAGCAAAAACTCCGCCTGACAACCTTAGAAGTGACTGCCACT
CAGGACCAATTTGGTTGGGGACGTGTCACAGAGGTTCGTAAGGACTTGGGTGTCTTTGTGGATACAGGCCTTCCTGACAA
GGAAATCGTTGTGTCACTCGATATTCTCCCTGAGCTCAAGGAACTCTGGCCTAAGAAGGGCGACCAACTCTACATCCGTC
TTGAAGTGGATAAGAAAGACCGTATCTGGGGTCTCTTGGCTTATCAAGAAGACTTCCAACGTCTTGCTCGTCCTGCCTAC
AACAACATGCAGAACCAAAACTGGCCAGCCATTGTTTACCGTCTCAAGCTATCAGGAACTTTTGTTTACCTACCAGAAAA
TAATATGCTTGGTTTTATTCATCCTAGCGAGCGTTACGCAGAGCCACGTTTGGGGCAAGTATTAGATGCGCGCGTTATTG
GTTTCCGTGAAGTGGACCGCACTTTGAACCTCTCCCTCAAACCACGCTCCTTTGAAATGTTGGAAAACGATGCTCAGATG
ATTTTGACTTATTTGGAAAGCAATGGCGGTTTCATGACCTTAAATGACAAGTCATCTCCAGACGACATCAAGGCAACCTT
TGGCATTTCTAAAGGTCAGTTCAAGAAAGCTTTAGGTGGTCTTATGAAGGCTGGTAAAATCAAGCAGGACCAGTTTGGTA
CAGAGTTGATTTAG

Upstream 100 bases:

>100_bases
TTCAAAAAGTAACAGACGATGCTGTTAAACACATCGACGATATGACTGCCAACAAAGAGAAAGAACTTTTGGAAGTCTAA
AAATAAACAGAAAAACTCAG

Downstream 100 bases:

>100_bases
GGAGGCTTATGAGAAAATCATTTTACACTTGGCTCATGACCGAGCGCAATCCTAAAAGTAACAGTCCCAAAGCAATTTTG
GCAGACCTCGCTTTTGAAGA

Product: S1 RNA-binding domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MALLAEFYSKEGNMNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQHTVGDTVKGFAYTDMKQKLRLTTLEVTAT
QDQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPELKELWPKKGDQLYIRLEVDKKDRIWGLLAYQEDFQRLARPAY
NNMQNQNWPAIVYRLKLSGTFVYLPENNMLGFIHPSERYAEPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQM
ILTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI

Sequences:

>Translated_297_residues
MALLAEFYSKEGNMNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQHTVGDTVKGFAYTDMKQKLRLTTLEVTAT
QDQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPELKELWPKKGDQLYIRLEVDKKDRIWGLLAYQEDFQRLARPAY
NNMQNQNWPAIVYRLKLSGTFVYLPENNMLGFIHPSERYAEPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQM
ILTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI
>Mature_296_residues
ALLAEFYSKEGNMNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQHTVGDTVKGFAYTDMKQKLRLTTLEVTATQ
DQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPELKELWPKKGDQLYIRLEVDKKDRIWGLLAYQEDFQRLARPAYN
NMQNQNWPAIVYRLKLSGTFVYLPENNMLGFIHPSERYAEPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQMI
LTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI

Specific function: Unknown

COG id: COG2996

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 S1 motif domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016027
- InterPro:   IPR003029
- InterPro:   IPR022967
- InterPro:   IPR014464 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33874; Mature: 33743

Theoretical pI: Translated: 5.54; Mature: 5.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALLAEFYSKEGNMNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQHTVGDTVKG
CCCHHHHHCCCCCCCCCHHHEEEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCC
FAYTDMKQKLRLTTLEVTATQDQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPELK
CEECCHHHCEEEEEEEEEECCCCCCCCHHHHHHHHCCEEEECCCCCCEEEEEEECCHHHH
ELWPKKGDQLYIRLEVDKKDRIWGLLAYQEDFQRLARPAYNNMQNQNWPAIVYRLKLSGT
HHCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCE
FVYLPENNMLGFIHPSERYAEPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQM
EEEEECCCEEEEECCHHHCCCCCHHHHHHHHHHCHHHHCCEEEEEECCCHHHHHHCCHHE
ILTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI
EEEEEECCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
ALLAEFYSKEGNMNTNLASFIVGLIIDENDRFYFVQKDGQTYALAKEEGQHTVGDTVKG
CCHHHHHCCCCCCCCCHHHEEEEEEEECCCCEEEEEECCCEEEEECCCCCCCCCCCCCC
FAYTDMKQKLRLTTLEVTATQDQFGWGRVTEVRKDLGVFVDTGLPDKEIVVSLDILPELK
CEECCHHHCEEEEEEEEEECCCCCCCCHHHHHHHHCCEEEECCCCCCEEEEEEECCHHHH
ELWPKKGDQLYIRLEVDKKDRIWGLLAYQEDFQRLARPAYNNMQNQNWPAIVYRLKLSGT
HHCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEECCE
FVYLPENNMLGFIHPSERYAEPRLGQVLDARVIGFREVDRTLNLSLKPRSFEMLENDAQM
EEEEECCCEEEEECCHHHCCCCCHHHHHHHHHHCHHHHCCEEEEEECCCHHHHHHCCHHE
ILTYLESNGGFMTLNDKSSPDDIKATFGISKGQFKKALGGLMKAGKIKQDQFGTELI
EEEEEECCCCEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9353932; 9384377 [H]