| Definition | Streptococcus pneumoniae Hungary19A-6, complete genome. |
|---|---|
| Accession | NC_010380 |
| Length | 2,245,615 |
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The map label for this gene is toxA [H]
Identifier: 169833837
GI number: 169833837
Start: 201209
End: 203326
Strand: Direct
Name: toxA [H]
Synonym: SPH_0232
Alternate gene names: 169833837
Gene position: 201209-203326 (Clockwise)
Preceding gene: 169833386
Following gene: 169833176
Centisome position: 8.96
GC content: 39.71
Gene sequence:
>2118_bases ATGAATAAGAAAAAAATGATTTTAACAAGCCTAGCCAGCGTCGCTATCTTAGGGGCTGGTTTTGTTACGTCTCAGCCTAC TTTTGTAAGAGCAGAAGAAGCTCCCGTAGCTAGTCAGTCTAAAGCTGAGAAAGACTATGATGCAGCAGTGAAAAAATCTG AAGCTGCTAAGAAACATTACGAAGAAGCTAAAAAGAAAGCAAAAGAAGCTCAGAAAAAATATGATGAGGATCAGAAGAAA ACTGAAGATAAGGCAGAGGCAGTTAAGAAAGCTGATGAAGAACTTCAAAAAGCGAATTTGGCAGTTCAAAAGGCGTATGT AGAATATAGAGAAGCGAAAGATAAAGCTAGCGCTGAGAAAAAGATTGAAGAAGCAAAACGAAAACAAAAAGAAGCGAACA AAAAATTTAATGAGGAGCAAGCAAAAGTAGTTCCTGAAGCAAAGGAGTTAGCTGCTACTAAACAAAAAGCGGAAAAAGCT AAAAAAGACGCCGAAGTAGCTAAGGAAAAATATGATAAGGCAGTTCAAGAGGTAGAAGTAGAGAAAAATAAAATACTTGA ACAAGATGCTGAAAACGAAAAGAAAATTGACGTACTTCAAAACAAAGTCGCTGATTTAGAAAAAGGAATTGCTCTTTATC AAAACAAAGTCGCTGAATTAAATAAAGAAATTGCTAGACTTCAAAGCGATTTAAAAGATGCTGAAGAAAATAATGTAGAA GACTATATTAAAGAAGGTTTAGAGCAAGCTATCGCTGATAAAAAAGCTGAATTAGCTACAACTCAACAAAACATAGATAA AACTCAAAAAGATTTAGAGGATGCTGAATTAGAACTTGAAAAAGTATTAGCTACATTAGACCCTGAAGGTAAAACTCAAG ATGAATTAGATAAAGAAGCTGCAGAAGATGCTAATATTGAAGCTCTTCAAAACAAAGTTGCTGATCTAGAAAACAAGGTT GCTGAATTAGATAAAGAAGTTACTAGACTTCAAAGCGATTTAAAAGATGCTGAAGAAAACAATGTAGAAGACTACGTTAA AGAAGGCTTAGAGAAAGCTCTTACTGATAAAAAAGTTGAATTAAATAATACTCAAAAAGCATTAGATACTGCTCAAAAAG CATTAGATACTGCTCTTAATGAATTAGGTCCTGACGGTGATGAAGAAGAAACTCCAGCTCCAGCACCAAAACCAGAGCAA CCAGCTGAACAACCAAAACCAGCGCCGGCTCCTCAACCAGCTCCAGCACCAAAACCAGAAAAAACAGATGATCAACAAGC TGAAGAAGACTATGCTCGTAGATCAGAAGAAGAATATAACCGCTTGCCCCAACAGCAACCGCCAAAAGCAGAAAAACCAG CTCCAGCACCAAAACCAGAGCAACCAGTTCCTGCACCAAAACCAGGTTGGAAACAAGAAAACGGTATGTGGTACTTCTAC AATACTGATGGTTCAATGGCTACAGGTTGGCTCCAAAACAACGGTTCATGGTATTACCTCAACAGCAATGGCGCTATGGC TACAGGTTGGCTCCAATACAATGGTTCATGGTATTACCTAAACGCTAACGGCGCTATGGCAACAGGTTGGGCTAAAGTCA ACGGTTCATGGTACTACCTAAACGCTAATGGTGCTATGGCTACAGGTTGGCTCCAATACAACGATTCATGGTATTACCTA AACGCTAACGGCGCTATGGCGACAGGATGGCTCCAATACAACGGTTCATGGTACTACCTCAACGCTAACGGTGCTATGGC TACAGGTTGGGCTAAAGTCAACGGTTCATGGTACTACCTCAACGCTAATGGTGCTATGGCTACAGGTTGGCTCCAATACA ACGGTTCATGGTATTACCTAAACGCTAACGGTGCTATGGCTACAGGTTGGGCTAAAGTCAACGGTTCATGGTACTACCTC AACGCTAACGGTTCAATGGCAACAGGTTGGGTGAAAGATGGAGATACCTGGTACTATCTTGAAGCATCAGGTGCTATGAA AGCAAGCCAATGGTTCAAAGTATCAGATAAATGGTACTATGTCAATGGTTTAGGTGCCCTTGCAGTCAACACAACTGTAG ATGGCTATAAAGTCAATGCCAATGGTGAATGGGTTTAA
Upstream 100 bases:
>100_bases ATAAAAATGTAATATAAAACATTTGACAAATATTTATGGGGGGAGTATACTTAATATAAGTATAGTCTAAAAATGACTAT CAGAAAAGAGGTAAATTTAG
Downstream 100 bases:
>100_bases GCCGATTAAATTAAATCATGTTAAGAACATTTGACATTTTAATTTTGAAACAAAGATAAGGTTCGATTGAATAGATTTAT GTTCGTATTCTTTAGGTACC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 705; Mature: 705
Protein sequence:
>705_residues MNKKKMILTSLASVAILGAGFVTSQPTFVRAEEAPVASQSKAEKDYDAAVKKSEAAKKHYEEAKKKAKEAQKKYDEDQKK TEDKAEAVKKADEELQKANLAVQKAYVEYREAKDKASAEKKIEEAKRKQKEANKKFNEEQAKVVPEAKELAATKQKAEKA KKDAEVAKEKYDKAVQEVEVEKNKILEQDAENEKKIDVLQNKVADLEKGIALYQNKVAELNKEIARLQSDLKDAEENNVE DYIKEGLEQAIADKKAELATTQQNIDKTQKDLEDAELELEKVLATLDPEGKTQDELDKEAAEDANIEALQNKVADLENKV AELDKEVTRLQSDLKDAEENNVEDYVKEGLEKALTDKKVELNNTQKALDTAQKALDTALNELGPDGDEEETPAPAPKPEQ PAEQPKPAPAPQPAPAPKPEKTDDQQAEEDYARRSEEEYNRLPQQQPPKAEKPAPAPKPEQPVPAPKPGWKQENGMWYFY NTDGSMATGWLQNNGSWYYLNSNGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYLNANGAMATGWLQYNDSWYYL NANGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYLNANGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYL NANGSMATGWVKDGDTWYYLEASGAMKASQWFKVSDKWYYVNGLGALAVNTTVDGYKVNANGEWV
Sequences:
>Translated_705_residues MNKKKMILTSLASVAILGAGFVTSQPTFVRAEEAPVASQSKAEKDYDAAVKKSEAAKKHYEEAKKKAKEAQKKYDEDQKK TEDKAEAVKKADEELQKANLAVQKAYVEYREAKDKASAEKKIEEAKRKQKEANKKFNEEQAKVVPEAKELAATKQKAEKA KKDAEVAKEKYDKAVQEVEVEKNKILEQDAENEKKIDVLQNKVADLEKGIALYQNKVAELNKEIARLQSDLKDAEENNVE DYIKEGLEQAIADKKAELATTQQNIDKTQKDLEDAELELEKVLATLDPEGKTQDELDKEAAEDANIEALQNKVADLENKV AELDKEVTRLQSDLKDAEENNVEDYVKEGLEKALTDKKVELNNTQKALDTAQKALDTALNELGPDGDEEETPAPAPKPEQ PAEQPKPAPAPQPAPAPKPEKTDDQQAEEDYARRSEEEYNRLPQQQPPKAEKPAPAPKPEQPVPAPKPGWKQENGMWYFY NTDGSMATGWLQNNGSWYYLNSNGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYLNANGAMATGWLQYNDSWYYL NANGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYLNANGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYL NANGSMATGWVKDGDTWYYLEASGAMKASQWFKVSDKWYYVNGLGALAVNTTVDGYKVNANGEWV >Mature_705_residues MNKKKMILTSLASVAILGAGFVTSQPTFVRAEEAPVASQSKAEKDYDAAVKKSEAAKKHYEEAKKKAKEAQKKYDEDQKK TEDKAEAVKKADEELQKANLAVQKAYVEYREAKDKASAEKKIEEAKRKQKEANKKFNEEQAKVVPEAKELAATKQKAEKA KKDAEVAKEKYDKAVQEVEVEKNKILEQDAENEKKIDVLQNKVADLEKGIALYQNKVAELNKEIARLQSDLKDAEENNVE DYIKEGLEQAIADKKAELATTQQNIDKTQKDLEDAELELEKVLATLDPEGKTQDELDKEAAEDANIEALQNKVADLENKV AELDKEVTRLQSDLKDAEENNVEDYVKEGLEKALTDKKVELNNTQKALDTAQKALDTALNELGPDGDEEETPAPAPKPEQ PAEQPKPAPAPQPAPAPKPEKTDDQQAEEDYARRSEEEYNRLPQQQPPKAEKPAPAPKPEQPVPAPKPGWKQENGMWYFY NTDGSMATGWLQNNGSWYYLNSNGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYLNANGAMATGWLQYNDSWYYL NANGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYLNANGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYL NANGSMATGWVKDGDTWYYLEASGAMKASQWFKVSDKWYYVNGLGALAVNTTVDGYKVNANGEWV
Specific function: Only after the enteral delivery of the enterotoxin A may the characteristic disease called pseudomembranous colitis be induced [H]
COG id: COG5263
COG function: function code R; FOG: Glucan-binding domain (YG repeat)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 32 cell wall-binding repeats [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018337 - InterPro: IPR007577 - InterPro: IPR020974 [H]
Pfam domain/function: PF01473 CW_binding_1; PF04488 Gly_transf_sug; PF11713 Peptidase_C80 [H]
EC number: NA
Molecular weight: Translated: 78744; Mature: 78744
Theoretical pI: Translated: 4.65; Mature: 4.65
Prosite motif: PS00213 LIPOCALIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNKKKMILTSLASVAILGAGFVTSQPTFVRAEEAPVASQSKAEKDYDAAVKKSEAAKKHY CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHH EEAKKKAKEAQKKYDEDQKKTEDKAEAVKKADEELQKANLAVQKAYVEYREAKDKASAEK HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIEEAKRKQKEANKKFNEEQAKVVPEAKELAATKQKAEKAKKDAEVAKEKYDKAVQEVEV HHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKNKILEQDAENEKKIDVLQNKVADLEKGIALYQNKVAELNKEIARLQSDLKDAEENNVE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DYIKEGLEQAIADKKAELATTQQNIDKTQKDLEDAELELEKVLATLDPEGKTQDELDKEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AEDANIEALQNKVADLENKVAELDKEVTRLQSDLKDAEENNVEDYVKEGLEKALTDKKVE HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEE LNNTQKALDTAQKALDTALNELGPDGDEEETPAPAPKPEQPAEQPKPAPAPQPAPAPKPE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KTDDQQAEEDYARRSEEEYNRLPQQQPPKAEKPAPAPKPEQPVPAPKPGWKQENGMWYFY CCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE NTDGSMATGWLQNNGSWYYLNSNGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYL ECCCCEEEEEEECCCCEEEECCCCCEEEEEEEECCEEEEEECCCCEEECEEEECCEEEEE NANGAMATGWLQYNDSWYYLNANGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYL ECCCCEEEEEEEECCEEEEEECCCCEEEEEEEECCEEEEEECCCCEEECEEEECCEEEEE NANGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYLNANGSMATGWVKDGDTWYYL ECCCCEEEEEEEECCEEEEEECCCCEEECEEEECCEEEEEECCCCEEECEEECCCEEEEE EASGAMKASQWFKVSDKWYYVNGLGALAVNTTVDGYKVNANGEWV ECCCCCCCCCCEEECCCEEEEECCEEEEEEEECCCEEECCCCCCC >Mature Secondary Structure MNKKKMILTSLASVAILGAGFVTSQPTFVRAEEAPVASQSKAEKDYDAAVKKSEAAKKHY CCCHHHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCCCHHHCCHHHHHHHHHHHHHHHHH EEAKKKAKEAQKKYDEDQKKTEDKAEAVKKADEELQKANLAVQKAYVEYREAKDKASAEK HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH KIEEAKRKQKEANKKFNEEQAKVVPEAKELAATKQKAEKAKKDAEVAKEKYDKAVQEVEV HHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EKNKILEQDAENEKKIDVLQNKVADLEKGIALYQNKVAELNKEIARLQSDLKDAEENNVE HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHH DYIKEGLEQAIADKKAELATTQQNIDKTQKDLEDAELELEKVLATLDPEGKTQDELDKEA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AEDANIEALQNKVADLENKVAELDKEVTRLQSDLKDAEENNVEDYVKEGLEKALTDKKVE HCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCEE LNNTQKALDTAQKALDTALNELGPDGDEEETPAPAPKPEQPAEQPKPAPAPQPAPAPKPE CCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KTDDQQAEEDYARRSEEEYNRLPQQQPPKAEKPAPAPKPEQPVPAPKPGWKQENGMWYFY CCCHHHHHHHHHHCCHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE NTDGSMATGWLQNNGSWYYLNSNGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYL ECCCCEEEEEEECCCCEEEECCCCCEEEEEEEECCEEEEEECCCCEEECEEEECCEEEEE NANGAMATGWLQYNDSWYYLNANGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYL ECCCCEEEEEEEECCEEEEEECCCCEEEEEEEECCEEEEEECCCCEEECEEEECCEEEEE NANGAMATGWLQYNGSWYYLNANGAMATGWAKVNGSWYYLNANGSMATGWVKDGDTWYYL ECCCCEEEEEEEECCEEEEEECCCCEEECEEEECCEEEEEECCCCEEECEEECCCEEEEE EASGAMKASQWFKVSDKWYYVNGLGALAVNTTVDGYKVNANGEWV ECCCCCCCCCCEEECCCEEEEECCEEEEEEEECCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2109310; 2105276 [H]