Click here to switch to the map view.

The map label for this gene is 169833768

Identifier: 169833768

GI number: 169833768

Start: 170504

End: 171223

Strand: Direct

Name: 169833768

Synonym: SPH_0195

Alternate gene names: NA

Gene position: 170504-171223 (Clockwise)

Preceding gene: 169832828

Following gene: 169832797

Centisome position: 7.59

GC content: 41.39

Gene sequence:

>720_bases
ATGGCAAAAACATTTTTTATTCCAAATAAACAGAGCATTTTAGGAGAACAAGAGATTTTGAATGCCAAGTCGATCTTGGC
CTTGCTAGACGGTTTGGAGTCACATAGCTATGATGTAGTCTATCTCCGTCAGCCTCTTAATCGTCTCGAGTATATTGAGT
GTGCGATAGTGGGGCAATCACAATTTCTTTTTAAGGTCAGTTATGCTGATGGTCAAAAGGCTTACCGTGTCGATCTTCCT
GACCTACTAACAAAGACAGACTGGCAGATTATCAAGTCATTTTTAGATGCTTTGCTTGCTTATACAGGGACTGATATTGA
AGGGCTAGATGGTTTTGATTTTGAAGCTTATTTCCAAGCAAGTATTCAAGCCTATCTAGCAGACCCTGTAGCTCGTTTTA
CGATTTGCCAAGGAATTTTTAATCCTATTTTCTTTAGTCGTGAGAACTTGAAAAGCTTTTTAGAGGCAGATGGCTTGGCT
CAGTTTGAAGCGCGTGTGCGTGCGGTTCAAGAGACAGATGCCTACTTTGCAAGAGTTTCCTTCTATCAGGATGGAGAAGG
AAAAGTGCATGGCGTTTACCATTTAGCTCAAGGAGTCAAGACAGTTTTACCGAGAGAACCGTTTGTTCCTGCAGCCTATA
TTGAGCAATTGGTGGATAAGGAAGTCCAGTGGGAGATTTACTTGGTTCAAAAGCCCGCTTGGACTATGCAAAATTCTTAG

Upstream 100 bases:

>100_bases
TGTTTTTCTATGCTTTGTACTCAAAAATCTAAAGTTTGTTTCTGTATCTTTCAGAAAAATAAGGTATACTGTATGTAAAC
GATTTCAAAGGAGTCCAGTT

Downstream 100 bases:

>100_bases
AGGTATTACCCCCATCTTTTTACCACCAACTAGACGCCAATCAAATAGAAATGCAACCCATATTAGACAAAGATTTTAAA
ACATTAGCACAAGAAAAGTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MAKTFFIPNKQSILGEQEILNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQSQFLFKVSYADGQKAYRVDLP
DLLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQASIQAYLADPVARFTICQGIFNPIFFSRENLKSFLEADGLA
QFEARVRAVQETDAYFARVSFYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIYLVQKPAWTMQNS

Sequences:

>Translated_239_residues
MAKTFFIPNKQSILGEQEILNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQSQFLFKVSYADGQKAYRVDLP
DLLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQASIQAYLADPVARFTICQGIFNPIFFSRENLKSFLEADGLA
QFEARVRAVQETDAYFARVSFYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIYLVQKPAWTMQNS
>Mature_238_residues
AKTFFIPNKQSILGEQEILNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQSQFLFKVSYADGQKAYRVDLPD
LLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQASIQAYLADPVARFTICQGIFNPIFFSRENLKSFLEADGLAQ
FEARVRAVQETDAYFARVSFYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIYLVQKPAWTMQNS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27224; Mature: 27093

Theoretical pI: Translated: 4.55; Mature: 4.55

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAKTFFIPNKQSILGEQEILNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQS
CCCEEECCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHEEEEEEECCC
QFLFKVSYADGQKAYRVDLPDLLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQA
EEEEEEEECCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
SIQAYLADPVARFTICQGIFNPIFFSRENLKSFLEADGLAQFEARVRAVQETDAYFARVS
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEE
FYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIYLVQKPAWTMQNS
EEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCC
>Mature Secondary Structure 
AKTFFIPNKQSILGEQEILNAKSILALLDGLESHSYDVVYLRQPLNRLEYIECAIVGQS
CCEEECCCHHHHCCHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHEEEEEEECCC
QFLFKVSYADGQKAYRVDLPDLLTKTDWQIIKSFLDALLAYTGTDIEGLDGFDFEAYFQA
EEEEEEEECCCCEEEEECCHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHH
SIQAYLADPVARFTICQGIFNPIFFSRENLKSFLEADGLAQFEARVRAVQETDAYFARVS
HHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHEEEEE
FYQDGEGKVHGVYHLAQGVKTVLPREPFVPAAYIEQLVDKEVQWEIYLVQKPAWTMQNS
EEECCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCEEEEEEEECCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA