Click here to switch to the map view.

The map label for this gene is 169833748

Identifier: 169833748

GI number: 169833748

Start: 55651

End: 56067

Strand: Direct

Name: 169833748

Synonym: SPH_0065

Alternate gene names: NA

Gene position: 55651-56067 (Clockwise)

Preceding gene: 169834348

Following gene: 169833158

Centisome position: 2.48

GC content: 37.89

Gene sequence:

>417_bases
ATGCAAATTGAATTTTTCAATTTTCTAAGAAGTGTCGTACAGACTGAAGATGGTTTGGTCTTGTACGCTCTAGCACTGAT
TGTCTCAATGGAAATCATTGATTTTGTGACAGGGACGATTGCGGCAATTATCAATCCTGACATCGAGTACAAGAGCAAAA
TCGGCATTAACGGGCTCCTTCGTAAGATTTCAGGGGTTCTCTTACTGATGATCCTCATTCCGGCGTCCGTTTTGTTGCCT
GAAAAGACAGGTTTTGTATTCTTGCACTCAATCTATCTCGGGTACATCGCATTTACTTTTCAATCTCTCATTGAAAATTA
CCGCAAATTAAAAGGAAATGTTACTCTTTTTCAGCCGATTGTAAAAGTATTTCAGCGATTACTTGAAAAAGATGATGATA
CGAAAAAAGGAGAATAA

Upstream 100 bases:

>100_bases
CGTTCTGTTGAATCATGAATTCTATATCATGAAATTTGATGCAGAGGGCAATCCTGACTGGACGGATCCAACGGTAAAAC
CTAAAGAATAGGAGGTGTGT

Downstream 100 bases:

>100_bases
CAAATGCAACAAATTACTGAAATCATTACTAATGGAGCAATCAGCATCCTAGTCATTTTAGCAGGGGTGGTAGTTAGGGC
AGTCAAGGATTACCTGGTTC

Product: putative holin 1

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 138; Mature: 138

Protein sequence:

>138_residues
MQIEFFNFLRSVVQTEDGLVLYALALIVSMEIIDFVTGTIAAIINPDIEYKSKIGINGLLRKISGVLLLMILIPASVLLP
EKTGFVFLHSIYLGYIAFTFQSLIENYRKLKGNVTLFQPIVKVFQRLLEKDDDTKKGE

Sequences:

>Translated_138_residues
MQIEFFNFLRSVVQTEDGLVLYALALIVSMEIIDFVTGTIAAIINPDIEYKSKIGINGLLRKISGVLLLMILIPASVLLP
EKTGFVFLHSIYLGYIAFTFQSLIENYRKLKGNVTLFQPIVKVFQRLLEKDDDTKKGE
>Mature_138_residues
MQIEFFNFLRSVVQTEDGLVLYALALIVSMEIIDFVTGTIAAIINPDIEYKSKIGINGLLRKISGVLLLMILIPASVLLP
EKTGFVFLHSIYLGYIAFTFQSLIENYRKLKGNVTLFQPIVKVFQRLLEKDDDTKKGE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15601; Mature: 15601

Theoretical pI: Translated: 7.51; Mature: 7.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQIEFFNFLRSVVQTEDGLVLYALALIVSMEIIDFVTGTIAAIINPDIEYKSKIGINGLL
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHH
RKISGVLLLMILIPASVLLPEKTGFVFLHSIYLGYIAFTFQSLIENYRKLKGNVTLFQPI
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VKVFQRLLEKDDDTKKGE
HHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MQIEFFNFLRSVVQTEDGLVLYALALIVSMEIIDFVTGTIAAIINPDIEYKSKIGINGLL
CCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCHHHHH
RKISGVLLLMILIPASVLLPEKTGFVFLHSIYLGYIAFTFQSLIENYRKLKGNVTLFQPI
HHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH
VKVFQRLLEKDDDTKKGE
HHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA