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The map label for this gene is rbsA [H]

Identifier: 169833639

GI number: 169833639

Start: 118614

End: 119210

Strand: Direct

Name: rbsA [H]

Synonym: SPH_0146

Alternate gene names: 169833639

Gene position: 118614-119210 (Clockwise)

Preceding gene: 169833080

Following gene: 169834356

Centisome position: 5.28

GC content: 29.48

Gene sequence:

>597_bases
ATGAAAATTGAAAATGAATCTAAAAGTTATGATAAATGTATATTGAAAAATATATCACTAGAGATTGATAAGGGAATTTA
CAGAGTTGAAGGAGAGAATGGTTCAGGAAAGAGCACCCTTCTACAACTTTTAGCTGGGCTAGAGACTTTTGATAGTGGTT
TAAAGAATTGTGTCTCCAAAGATGTACTATACCTTGATACCAATCAGCTTGGGGTTGTTCCATTTACTATAGAAGAAAAT
TTGCAGTTGTTGTGTGATTCTTTTCAAATCCATCTATCATTTGAGGATAAAGAACAAATTAATACTTTTTTTGATAATAA
AATCGGAGATAACTATATGACAGCATCTACTGGAACAAAATTCAAATTAGGCTTATCCTTAATTTTTGCTAAAAATTGGG
ATTATATTTTTATTGATGAGACTTTATCAACAGTGGATGCAAGAAGTATTGATATGATTGCTAAACGCTTAATTTCCATG
AAAGAAAGCTCTACTATTATATATGTATCTCATAATTTATTGAATCAAGAATTGATTAGCAAATCTCAAAGGATTTTAAT
AGAGGAAGGACGGGTTTATGAAATTTCAAACAAATAA

Upstream 100 bases:

>100_bases
GAATTAAAAATATACTTATTTATATAAAAAGTAATTTAAAATGGTATATCATTTCTTATCTTTTATTAATTTTAGCAGCG
TTGATAGAGGGAATTAAATT

Downstream 100 bases:

>100_bases
TAGTTTATACAAATTAATGAATCTGATTATTTATCTTTTTCTTTTATATTTGTTTATTGATTTACTGATGAAGTCGGGAA
TTTTAGATGAACAAATTGAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 198

Protein sequence:

>198_residues
MKIENESKSYDKCILKNISLEIDKGIYRVEGENGSGKSTLLQLLAGLETFDSGLKNCVSKDVLYLDTNQLGVVPFTIEEN
LQLLCDSFQIHLSFEDKEQINTFFDNKIGDNYMTASTGTKFKLGLSLIFAKNWDYIFIDETLSTVDARSIDMIAKRLISM
KESSTIIYVSHNLLNQELISKSQRILIEEGRVYEISNK

Sequences:

>Translated_198_residues
MKIENESKSYDKCILKNISLEIDKGIYRVEGENGSGKSTLLQLLAGLETFDSGLKNCVSKDVLYLDTNQLGVVPFTIEEN
LQLLCDSFQIHLSFEDKEQINTFFDNKIGDNYMTASTGTKFKLGLSLIFAKNWDYIFIDETLSTVDARSIDMIAKRLISM
KESSTIIYVSHNLLNQELISKSQRILIEEGRVYEISNK
>Mature_198_residues
MKIENESKSYDKCILKNISLEIDKGIYRVEGENGSGKSTLLQLLAGLETFDSGLKNCVSKDVLYLDTNQLGVVPFTIEEN
LQLLCDSFQIHLSFEDKEQINTFFDNKIGDNYMTASTGTKFKLGLSLIFAKNWDYIFIDETLSTVDARSIDMIAKRLISM
KESSTIIYVSHNLLNQELISKSQRILIEEGRVYEISNK

Specific function: Part of the ABC transporter complex RbsABCD involved in ribose import. Responsible for energy coupling to the transport system [H]

COG id: COG1116

COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR015861
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: =3.6.3.17 [H]

Molecular weight: Translated: 22501; Mature: 22501

Theoretical pI: Translated: 4.70; Mature: 4.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIENESKSYDKCILKNISLEIDKGIYRVEGENGSGKSTLLQLLAGLETFDSGLKNCVSK
CCCCCCCCHHHHHHHHHCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
DVLYLDTNQLGVVPFTIEENLQLLCDSFQIHLSFEDKEQINTFFDNKIGDNYMTASTGTK
CEEEEECCCEEEEEEEHHCCHHHEEEEEEEEEEECCHHHHHHHHCCCCCCCEEECCCCCE
FKLGLSLIFAKNWDYIFIDETLSTVDARSIDMIAKRLISMKESSTIIYVSHNLLNQELIS
EEEEEEEEEECCCCEEEEECCHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHC
KSQRILIEEGRVYEISNK
CCCEEEEECCCEEEECCC
>Mature Secondary Structure
MKIENESKSYDKCILKNISLEIDKGIYRVEGENGSGKSTLLQLLAGLETFDSGLKNCVSK
CCCCCCCCHHHHHHHHHCCEEECCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHC
DVLYLDTNQLGVVPFTIEENLQLLCDSFQIHLSFEDKEQINTFFDNKIGDNYMTASTGTK
CEEEEECCCEEEEEEEHHCCHHHEEEEEEEEEEECCHHHHHHHHCCCCCCCEEECCCCCE
FKLGLSLIFAKNWDYIFIDETLSTVDARSIDMIAKRLISMKESSTIIYVSHNLLNQELIS
EEEEEEEEEECCCCEEEEECCHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCHHHHHHHC
KSQRILIEEGRVYEISNK
CCCEEEEECCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA