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The map label for this gene is yqjA [H]

Identifier: 169833579

GI number: 169833579

Start: 1722294

End: 1723247

Strand: Direct

Name: yqjA [H]

Synonym: SPH_1864

Alternate gene names: 169833579

Gene position: 1722294-1723247 (Clockwise)

Preceding gene: 169833162

Following gene: 169834237

Centisome position: 76.7

GC content: 44.65

Gene sequence:

>954_bases
ATGTCTATTAGCCAACGTACGACCAAGCTCATCTTAGCTACCTGTCTTGCCTGCCTGCTTGCTTATTTTCTCAATCTTTC
GTCAGCAGTTTCGGCTGGAATTATCGCTCTCTTGAGCCTATCTGATACGCGTAGAAGTACTTTAAAACTGGCTCGCAATC
GTCTTTTTTCTATGCTTCTAGCTCTGGCTATCGGTGTTCTAGCTTTTCATTTGAGCGGATTTCATATCTGGAGTCTCGGC
CTCTATCTGGCCTTCTACGTTCCTTTAGCCTACAAGATGGGCTGGGAAATTGGTATCACACCAAGCACTGTTTTGGTTAG
CCATCTCTTGGTTCAAGAGTCAACCTCTCCAGACCTTCTAGTCAATGAATTCCTTCTCTTTGCTATCGGTACAGGATTTG
CTTTACTGGTCAATCTCTACATGCCTTCACGAGAAAAGAAAATCCAGCACTACCACACGCTGGTGGAAGAAAAGTTAAAA
GATATCCTCCAGCGCTTCAAATACTATTTATCCAGAGGAGACGGACGCAACCGAGCACAGCTGGTAGCAGAATTAGACAC
GCTTTTGAAAGAAGCCCTCAGACTGGTCTATTTGGATCACTCTGACCACCTCTTTCACCAGACCGACTACCATATCCACT
ACTTTGAGATGAGACAACGACAAAGTCGTATCCTGAGAAACATGGCCCAACAGATTAACACTTGTCACCTTGCCGCCAGT
GAAAGCCTGATCTTAGCGCAACTCTTTTCAAAAATTGCAGGTCAACTGAGCCAGACCAATCCTGCTTCTGATTTGCTAGA
TGAAATTGAACGTTATCTGGAAGTCTTCCGGAACCGCAGTCTGCCCAAGACAAGAGAAGAGTTTGAAACCCGCGCCACCC
TTCTTCAACTCCTACGTGAAGCCAAAACCTTCATCCAAGTAAAAGTTGATTTTTACCAAAAATATAGACAGTAA

Upstream 100 bases:

>100_bases
GTTGCCGAATACGCAGCAACCCGTAAAAAATAACTCATCAAGGCAAGCCTGCTCATGTCTTGTCTTTTACGCTTTTATTC
TAACTTATTAGGAAATTCTT

Downstream 100 bases:

>100_bases
TACTCTTCAAACTACGTCAGCTTCACCTTGCTGTATATATGTTACTGACTTCGTCAGTTCTATCCACAACCTCAAAACGG
TGTTTTGAGCTGACTTCGTC

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 317; Mature: 316

Protein sequence:

>317_residues
MSISQRTTKLILATCLACLLAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLLALAIGVLAFHLSGFHIWSLG
LYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLLVNEFLLFAIGTGFALLVNLYMPSREKKIQHYHTLVEEKLK
DILQRFKYYLSRGDGRNRAQLVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAAS
ESLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLREAKTFIQVKVDFYQKYRQ

Sequences:

>Translated_317_residues
MSISQRTTKLILATCLACLLAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLLALAIGVLAFHLSGFHIWSLG
LYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLLVNEFLLFAIGTGFALLVNLYMPSREKKIQHYHTLVEEKLK
DILQRFKYYLSRGDGRNRAQLVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAAS
ESLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLREAKTFIQVKVDFYQKYRQ
>Mature_316_residues
SISQRTTKLILATCLACLLAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLLALAIGVLAFHLSGFHIWSLGL
YLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLLVNEFLLFAIGTGFALLVNLYMPSREKKIQHYHTLVEEKLKD
ILQRFKYYLSRGDGRNRAQLVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAASE
SLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLREAKTFIQVKVDFYQKYRQ

Specific function: Unknown

COG id: COG4129

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010343
- InterPro:   IPR021062 [H]

Pfam domain/function: PF06081 DUF939; PF11728 DUF939_C [H]

EC number: NA

Molecular weight: Translated: 36504; Mature: 36373

Theoretical pI: Translated: 9.61; Mature: 9.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSISQRTTKLILATCLACLLAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ALAIGVLAFHLSGFHIWSLGLYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHH
VNEFLLFAIGTGFALLVNLYMPSREKKIQHYHTLVEEKLKDILQRFKYYLSRGDGRNRAQ
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAAS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLRE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AKTFIQVKVDFYQKYRQ
HHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SISQRTTKLILATCLACLLAYFLNLSSAVSAGIIALLSLSDTRRSTLKLARNRLFSMLL
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
ALAIGVLAFHLSGFHIWSLGLYLAFYVPLAYKMGWEIGITPSTVLVSHLLVQESTSPDLL
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCHHH
VNEFLLFAIGTGFALLVNLYMPSREKKIQHYHTLVEEKLKDILQRFKYYLSRGDGRNRAQ
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
LVAELDTLLKEALRLVYLDHSDHLFHQTDYHIHYFEMRQRQSRILRNMAQQINTCHLAAS
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ESLILAQLFSKIAGQLSQTNPASDLLDEIERYLEVFRNRSLPKTREEFETRATLLQLLRE
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
AKTFIQVKVDFYQKYRQ
HHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]