Click here to switch to the map view.

The map label for this gene is 169833485

Identifier: 169833485

GI number: 169833485

Start: 410601

End: 411425

Strand: Direct

Name: 169833485

Synonym: SPH_0461

Alternate gene names: NA

Gene position: 410601-411425 (Clockwise)

Preceding gene: 169834388

Following gene: 169833414

Centisome position: 18.28

GC content: 36.85

Gene sequence:

>825_bases
TTGAACCAAACAGAAATAGTTAAATTGATTCAGAAAGTTGAATTGGATGCTATAAAAGAGTTTCAAAAAATTTGTAAAGA
GAACAATATAGATTTCTTCCTTCGTGGGGGGAGTGTACTTGGGGCAGTCAAATATGATGGCTTTATTCCATGGGATGATG
ACATGGATATTGCTGTGCCTCGTGAAGGCTACGATAAACTTCCAGGTATCTTTAAGGATAGAATTATCGCAGGCAAATAT
CAGGTTCTTGCTTATCAATATTGCGATACTTTACATTGCTACTTTCCTCGCTTATTCCTTTTAGAAGATGAAAGAAAACG
TTTGGGATTGCCACGAAATACCAATTTAGGTTTGCATTTGATTGATATCATTCCTTTGGATGGTGCCCCAAATCATTCAT
TTTTAAGAAAGCTTTACTTCGGTAAAGTATACTGGTATCGTTTTTTAGCAAGTTTAGGAACTACCTATGTTGGAGACCAT
GTGGATATGCATTCCGCTAAGCAAAAACTAATCATTGGTTTCTTTAAAAAGCTAGGATTTGCAAAACTATTCCCTCAAAA
TTATGTGTACAGACGCTTGGATAATCTCTATAAAAAGTATGATTGGAAAAAGCAGAAGTATGCTGGGACAATTAATGCAT
CTCTGTTTGCCAAAGAAGTCATGCCAGTAGAGATTTGGGGAGAAGGAGTAGAGAAGCCTTTTGAGGATGCCTTCTTTAAA
GTTCCCACGGAGTATGACCGCTATCTGAAAAGACTTTACGGAGAAAACTATCTTCACGAAGAGCCTAGTGATGATGAAAA
GAAATCGCATTTAGGAGGACAATAA

Upstream 100 bases:

>100_bases
TTCGTGTGGCAAATGAGCCTAAACGTCTCTTTAAGCGTTATTTTGTAGGGAATGTTTCATTTATAAGAAAAGTTTTAAGA
GCGAAAAGGGGATATAAACT

Downstream 100 bases:

>100_bases
TTTGTTTTGTTATATTATTTTGCATTACAAAGTCTTAGAGGAAACTATTTCTTGTGTTAAATCAATAAAAGAAGGCAATT
CCAATACAAAGCAGATCGTT

Product: Cps19aG

Products: NA

Alternate protein names: LicD1 Protein; LPS Biosynthesis Protein; LicD3 Protein; LicD2 Protein; Lipopolysaccharide Cholinephosphotransferase; LicD-Related Protein; Lipopolysaccharide Biosynthesis Protein; Lipopolysaccharide Biosynthesis Protein LicD; Polysaccharide Biosynthesis Protein; Lipooligosaccharide Cholinephosphotransferase; LicD-Family Phosphotransferase; LicD Family Phosphotransferase; Oligosaccaride Glycerophosphotransferase

Number of amino acids: Translated: 274; Mature: 274

Protein sequence:

>274_residues
MNQTEIVKLIQKVELDAIKEFQKICKENNIDFFLRGGSVLGAVKYDGFIPWDDDMDIAVPREGYDKLPGIFKDRIIAGKY
QVLAYQYCDTLHCYFPRLFLLEDERKRLGLPRNTNLGLHLIDIIPLDGAPNHSFLRKLYFGKVYWYRFLASLGTTYVGDH
VDMHSAKQKLIIGFFKKLGFAKLFPQNYVYRRLDNLYKKYDWKKQKYAGTINASLFAKEVMPVEIWGEGVEKPFEDAFFK
VPTEYDRYLKRLYGENYLHEEPSDDEKKSHLGGQ

Sequences:

>Translated_274_residues
MNQTEIVKLIQKVELDAIKEFQKICKENNIDFFLRGGSVLGAVKYDGFIPWDDDMDIAVPREGYDKLPGIFKDRIIAGKY
QVLAYQYCDTLHCYFPRLFLLEDERKRLGLPRNTNLGLHLIDIIPLDGAPNHSFLRKLYFGKVYWYRFLASLGTTYVGDH
VDMHSAKQKLIIGFFKKLGFAKLFPQNYVYRRLDNLYKKYDWKKQKYAGTINASLFAKEVMPVEIWGEGVEKPFEDAFFK
VPTEYDRYLKRLYGENYLHEEPSDDEKKSHLGGQ
>Mature_274_residues
MNQTEIVKLIQKVELDAIKEFQKICKENNIDFFLRGGSVLGAVKYDGFIPWDDDMDIAVPREGYDKLPGIFKDRIIAGKY
QVLAYQYCDTLHCYFPRLFLLEDERKRLGLPRNTNLGLHLIDIIPLDGAPNHSFLRKLYFGKVYWYRFLASLGTTYVGDH
VDMHSAKQKLIIGFFKKLGFAKLFPQNYVYRRLDNLYKKYDWKKQKYAGTINASLFAKEVMPVEIWGEGVEKPFEDAFFK
VPTEYDRYLKRLYGENYLHEEPSDDEKKSHLGGQ

Specific function: Unknown

COG id: COG3475

COG function: function code M; LPS biosynthesis protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32143; Mature: 32143

Theoretical pI: Translated: 8.63; Mature: 8.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQTEIVKLIQKVELDAIKEFQKICKENNIDFFLRGGSVLGAVKYDGFIPWDDDMDIAVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCEECC
REGYDKLPGIFKDRIIAGKYQVLAYQYCDTLHCYFPRLFLLEDERKRLGLPRNTNLGLHL
CCCHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCCCCCCEEE
IDIIPLDGAPNHSFLRKLYFGKVYWYRFLASLGTTYVGDHVDMHSAKQKLIIGFFKKLGF
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHCH
AKLFPQNYVYRRLDNLYKKYDWKKQKYAGTINASLFAKEVMPVEIWGEGVEKPFEDAFFK
HHHCHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCCCEECCCCCCCCHHHHHCC
VPTEYDRYLKRLYGENYLHEEPSDDEKKSHLGGQ
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCC
>Mature Secondary Structure
MNQTEIVKLIQKVELDAIKEFQKICKENNIDFFLRGGSVLGAVKYDGFIPWDDDMDIAVP
CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCEEEEEEECCCCCCCCCCCEECC
REGYDKLPGIFKDRIIAGKYQVLAYQYCDTLHCYFPRLFLLEDERKRLGLPRNTNLGLHL
CCCHHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHCCCCCCCCCCEEE
IDIIPLDGAPNHSFLRKLYFGKVYWYRFLASLGTTYVGDHVDMHSAKQKLIIGFFKKLGF
EEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHCCCCCHHHHHHHHHHHHHHHHHCH
AKLFPQNYVYRRLDNLYKKYDWKKQKYAGTINASLFAKEVMPVEIWGEGVEKPFEDAFFK
HHHCHHHHHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHCCCCEECCCCCCCCHHHHHCC
VPTEYDRYLKRLYGENYLHEEPSDDEKKSHLGGQ
CCHHHHHHHHHHHCCCCCCCCCCCHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA