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The map label for this gene is 169833455

Identifier: 169833455

GI number: 169833455

Start: 1141267

End: 1142046

Strand: Direct

Name: 169833455

Synonym: SPH_1232

Alternate gene names: NA

Gene position: 1141267-1142046 (Clockwise)

Preceding gene: 169832549

Following gene: 169832810

Centisome position: 50.82

GC content: 36.03

Gene sequence:

>780_bases
ATGAAACGAATTACCGCAAATCAATACCAAACCTCAGAACGGTATTACAAATTACCTAAAATTCTTTTTGAGGATGAGAA
ATATATGGATATGAAACTAGAAGTAAAGGTGGCTTATTCTATTTTAAAAGATCGTTTAGAATTATCTCTCAGTCGTGGTT
GGATAGATGAAGAAGGAGCGGTTTATTTAGTATTTTCTAACTCTAAACTGATGAAACTGTTAGGTTGTTCGAAGTCAAAA
TTACTGTCTATCAAAAAAATTCTTAAAGAATATGACTTAATTGATGAAGTCCAACAGTCTTCAAGTGAGAAAGGGAGACT
AGCTAATAAGATTTATTTAGGGGAGTTGTCTTCTACCCCAGTAGCTAGTTCAAACAGGCCTAGTGTTAAAAAAAGACTAG
GGCAGGTTGAAAATGAAACGGCCCCCGTCTCATATTCAGCCCCTAGTGAGACTGAAGTTAGTGAGACTGAAATTAGTGAG
ACTGAATCTTTATTTATTGAGGATGAGGAGGATAGGAATACTCAACCTATCTTGAAAAGAAAAGTAGAAAAGGTCACAAA
ATATGATCGAGATTATATTTGGGGATTGGTACAAGATCAATTTAGACGAGAGGGGTTTTCTGAAACAGCCAGTGAAATTG
CTATGACTGATTTTGAGAGAATCTATCAGTATGCTCTTGACAATGTTCGCTTTGTTAGACGAGCGGAAGTCCTTGCTGAA
TTTGTGTTTAATGGCTTGTATTCCGTTTGGAATAACCGTGTTAGAAAAGGAGGTGGTTAA

Upstream 100 bases:

>100_bases
TTGTTGAAGCCATCTCTCTTATGGCTGAATTAGAAAAAAGTGGCTTGGTTCGATTGGAATCAAGTGGAGATTTAATACTC
AAAGAACTTGGAGGAGCGCT

Downstream 100 bases:

>100_bases
ATGTCGCCAATCGAGTGGATATTAGTTATGCTCATTGTCATTTCAAGTGGAGTGACAGTTCTGACAATGATAGTCGATAA
GAAAGGGGTGATAAAGAAAT

Product: replication initiator protein A (RepA) N-terminus

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 259; Mature: 259

Protein sequence:

>259_residues
MKRITANQYQTSERYYKLPKILFEDEKYMDMKLEVKVAYSILKDRLELSLSRGWIDEEGAVYLVFSNSKLMKLLGCSKSK
LLSIKKILKEYDLIDEVQQSSSEKGRLANKIYLGELSSTPVASSNRPSVKKRLGQVENETAPVSYSAPSETEVSETEISE
TESLFIEDEEDRNTQPILKRKVEKVTKYDRDYIWGLVQDQFRREGFSETASEIAMTDFERIYQYALDNVRFVRRAEVLAE
FVFNGLYSVWNNRVRKGGG

Sequences:

>Translated_259_residues
MKRITANQYQTSERYYKLPKILFEDEKYMDMKLEVKVAYSILKDRLELSLSRGWIDEEGAVYLVFSNSKLMKLLGCSKSK
LLSIKKILKEYDLIDEVQQSSSEKGRLANKIYLGELSSTPVASSNRPSVKKRLGQVENETAPVSYSAPSETEVSETEISE
TESLFIEDEEDRNTQPILKRKVEKVTKYDRDYIWGLVQDQFRREGFSETASEIAMTDFERIYQYALDNVRFVRRAEVLAE
FVFNGLYSVWNNRVRKGGG
>Mature_259_residues
MKRITANQYQTSERYYKLPKILFEDEKYMDMKLEVKVAYSILKDRLELSLSRGWIDEEGAVYLVFSNSKLMKLLGCSKSK
LLSIKKILKEYDLIDEVQQSSSEKGRLANKIYLGELSSTPVASSNRPSVKKRLGQVENETAPVSYSAPSETEVSETEISE
TESLFIEDEEDRNTQPILKRKVEKVTKYDRDYIWGLVQDQFRREGFSETASEIAMTDFERIYQYALDNVRFVRRAEVLAE
FVFNGLYSVWNNRVRKGGG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010724 [H]

Pfam domain/function: PF06970 RepA_N [H]

EC number: NA

Molecular weight: Translated: 30032; Mature: 30032

Theoretical pI: Translated: 5.66; Mature: 5.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRITANQYQTSERYYKLPKILFEDEKYMDMKLEVKVAYSILKDRLELSLSRGWIDEEGA
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCC
VYLVFSNSKLMKLLGCSKSKLLSIKKILKEYDLIDEVQQSSSEKGRLANKIYLGELSSTP
EEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCC
VASSNRPSVKKRLGQVENETAPVSYSAPSETEVSETEISETESLFIEDEEDRNTQPILKR
CCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHEEEECCCCCCCHHHHHH
KVEKVTKYDRDYIWGLVQDQFRREGFSETASEIAMTDFERIYQYALDNVRFVRRAEVLAE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVFNGLYSVWNNRVRKGGG
HHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MKRITANQYQTSERYYKLPKILFEDEKYMDMKLEVKVAYSILKDRLELSLSRGWIDEEGA
CCCCCCCHHHHHHHHHHHHHHHCCCCCHHCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCC
VYLVFSNSKLMKLLGCSKSKLLSIKKILKEYDLIDEVQQSSSEKGRLANKIYLGELSSTP
EEEEECCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHEEEEECCCCCC
VASSNRPSVKKRLGQVENETAPVSYSAPSETEVSETEISETESLFIEDEEDRNTQPILKR
CCCCCCCHHHHHHHHCCCCCCCEEECCCCCCCCHHHHHHHHHHEEEECCCCCCCHHHHHH
KVEKVTKYDRDYIWGLVQDQFRREGFSETASEIAMTDFERIYQYALDNVRFVRRAEVLAE
HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVFNGLYSVWNNRVRKGGG
HHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2764571 [H]