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The map label for this gene is 169833316

Identifier: 169833316

GI number: 169833316

Start: 78929

End: 79810

Strand: Direct

Name: 169833316

Synonym: SPH_0104

Alternate gene names: NA

Gene position: 78929-79810 (Clockwise)

Preceding gene: 169833815

Following gene: 169832863

Centisome position: 3.51

GC content: 42.18

Gene sequence:

>882_bases
ATGCCAAGTAATCAAAACAACGCAGTGCGCCGCTATGAGAAACAATATGCGGGCATTCTTGAGACAGTTTTTGGAGTGCG
GGCAGCATTTTCAAACGCTCTAGCACCTATTCAGATTTTGGATGGGGTACAAGAAAACTCTAAGGCTTTCTCAGTTAAAA
CAAACAACACACCAGTTGTAATCGGTGAGTACAAAACCGGTGAAAATGATGGTGGTTTTGGTGATAACTCAGGGGCTCAG
TCACGCTTTGGTGGTGTGACAGAAGTTAAATATGAAAATACAGATGTCAACTATGACTATACCCTTACAATCCATGAGGG
TCTTGACCGTTACACAGTAAACAATGATCTTAACGCTGCTGTTGCCGACCGCTTGAAGTTGCAATCCGAGGCACAAACTC
GAACAGTGAACAAGCGAATTGGTAAATACTTGTCTGACAACGCTACTAAGACGGAAGCCCTTGCTGATTTTACAGATGAC
AAAGTAAAAGCTTTATTCAATAAGTTGTCGGCTTTTTACACAAACAACGAAGTTACAGCGCCGATTACTGTTTACTTGCG
TTCTGAATTTTACAACGCCATCGTAGATATGGCATCAGTTACAAGCGCCAAAGGGGCAACTATCTCCCTTGATGAAAACG
GGCTACCAAAATATAAGGGCTTTACCTTGGAAGAAACGCCAGCGCAGTACTTTGAGACAGGAGTTATCGCTATCTTCTCA
CCAAACGGTATTGTCATTCCGTTTGTTGGTATCTCAACAGCCCGTGTAATTGAGGCTGAAAACTTTGATGGTGTGAAATT
GCAAGCTGCTGCTAAGGGTGGTACTTACACTCTTGATGACAATAAGAAAGCAATTTACAAAGTTACAGGAACTATTGTAT
AG

Upstream 100 bases:

>100_bases
TTTTACCTCAAGGTAATCCGGCAGGAGAGGGTACAAGTGATGTTGATCCGTTCCAAGCGATTATTGACGGGTATGGCAAA
TAACAGAAAGGAGATTACAA

Downstream 100 bases:

>100_bases
GAGGTAGAACATGGCACTTTACAAAGCAACAAAAAATCTTTTCTTTGAGCAACTCAACATGGATGTGATTGTCGATGACA
TTATTGAACTTGATGAAGAT

Product: major capsid protein

Products: NA

Alternate protein names: Phage Capsid Protein

Number of amino acids: Translated: 293; Mature: 292

Protein sequence:

>293_residues
MPSNQNNAVRRYEKQYAGILETVFGVRAAFSNALAPIQILDGVQENSKAFSVKTNNTPVVIGEYKTGENDGGFGDNSGAQ
SRFGGVTEVKYENTDVNYDYTLTIHEGLDRYTVNNDLNAAVADRLKLQSEAQTRTVNKRIGKYLSDNATKTEALADFTDD
KVKALFNKLSAFYTNNEVTAPITVYLRSEFYNAIVDMASVTSAKGATISLDENGLPKYKGFTLEETPAQYFETGVIAIFS
PNGIVIPFVGISTARVIEAENFDGVKLQAAAKGGTYTLDDNKKAIYKVTGTIV

Sequences:

>Translated_293_residues
MPSNQNNAVRRYEKQYAGILETVFGVRAAFSNALAPIQILDGVQENSKAFSVKTNNTPVVIGEYKTGENDGGFGDNSGAQ
SRFGGVTEVKYENTDVNYDYTLTIHEGLDRYTVNNDLNAAVADRLKLQSEAQTRTVNKRIGKYLSDNATKTEALADFTDD
KVKALFNKLSAFYTNNEVTAPITVYLRSEFYNAIVDMASVTSAKGATISLDENGLPKYKGFTLEETPAQYFETGVIAIFS
PNGIVIPFVGISTARVIEAENFDGVKLQAAAKGGTYTLDDNKKAIYKVTGTIV
>Mature_292_residues
PSNQNNAVRRYEKQYAGILETVFGVRAAFSNALAPIQILDGVQENSKAFSVKTNNTPVVIGEYKTGENDGGFGDNSGAQS
RFGGVTEVKYENTDVNYDYTLTIHEGLDRYTVNNDLNAAVADRLKLQSEAQTRTVNKRIGKYLSDNATKTEALADFTDDK
VKALFNKLSAFYTNNEVTAPITVYLRSEFYNAIVDMASVTSAKGATISLDENGLPKYKGFTLEETPAQYFETGVIAIFSP
NGIVIPFVGISTARVIEAENFDGVKLQAAAKGGTYTLDDNKKAIYKVTGTIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31920; Mature: 31789

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
0.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPSNQNNAVRRYEKQYAGILETVFGVRAAFSNALAPIQILDGVQENSKAFSVKTNNTPVV
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCEE
IGEYKTGENDGGFGDNSGAQSRFGGVTEVKYENTDVNYDYTLTIHEGLDRYTVNNDLNAA
EEEECCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCEEEEEEEECCCCEEEECCCCCHH
VADRLKLQSEAQTRTVNKRIGKYLSDNATKTEALADFTDDKVKALFNKLSAFYTNNEVTA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
PITVYLRSEFYNAIVDMASVTSAKGATISLDENGLPKYKGFTLEETPAQYFETGVIAIFS
EEEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCEEEEEC
PNGIVIPFVGISTARVIEAENFDGVKLQAAAKGGTYTLDDNKKAIYKVTGTIV
CCCEEEEEECCCEEEEEECCCCCCEEEEEECCCCEEEECCCCEEEEEEEEECC
>Mature Secondary Structure 
PSNQNNAVRRYEKQYAGILETVFGVRAAFSNALAPIQILDGVQENSKAFSVKTNNTPVV
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCEEEEECCCCCEE
IGEYKTGENDGGFGDNSGAQSRFGGVTEVKYENTDVNYDYTLTIHEGLDRYTVNNDLNAA
EEEECCCCCCCCCCCCCCCHHHCCCEEEEEECCCCCCEEEEEEEECCCCEEEECCCCCHH
VADRLKLQSEAQTRTVNKRIGKYLSDNATKTEALADFTDDKVKALFNKLSAFYTNNEVTA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCC
PITVYLRSEFYNAIVDMASVTSAKGATISLDENGLPKYKGFTLEETPAQYFETGVIAIFS
EEEEEEHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCCCCCCCHHHHCCCEEEEEC
PNGIVIPFVGISTARVIEAENFDGVKLQAAAKGGTYTLDDNKKAIYKVTGTIV
CCCEEEEEECCCEEEEEECCCCCCEEEEEECCCCEEEECCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA