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The map label for this gene is glgB [H]

Identifier: 169833189

GI number: 169833189

Start: 1113570

End: 1115498

Strand: Direct

Name: glgB [H]

Synonym: SPH_1214

Alternate gene names: 169833189

Gene position: 1113570-1115498 (Clockwise)

Preceding gene: 169833360

Following gene: 169833116

Centisome position: 49.59

GC content: 40.75

Gene sequence:

>1929_bases
ATGGATAATAGAGAAGCATTAAAAACCTTTATGACGGGTGAAAATTTTTATCTCCAACATTATCTAGGAGCACATAGGGA
AGAACTAAATGGAGAGCATGGCTATACCTTCCGTGTTTGGGCACCTAATGCTCAGGCTGTTCACTTGGTTGGTGATTTTA
CCAACTGGATTGAAAATCAGATTCCAATGGTAAGAAATGATTTTGGGGTCTGGGAAGTCTTTACCAATATGGCTCAAGAA
GGGCATATTTACAAATATCATGTCACACGTCAAAATGGTCATCAACTGATGAAGATTGACCCTTTTGCTGTCAGGTATGA
GGCTCGTCCAGGAACAGGGGCAATCTTAACAGAGCTTCCTGAGAAGAAATGGAAGGATGGACTTTGGCTGGCACGAAGAA
AACGTTGGGGCTTTGAAGAGCGTCCTGTCAATATTTATGAAGTTCACGCTGGATCATGGAAAAGAAATTCTGATGGCAGT
CCTTATAGTTTTGCCCAGCTCAAGGATGAACTCATTCCTTATCTCGTTGAAATGAACTATACTCATATTGAGTTTATGCC
CTTGATGTCCCATCCTTTGGGCTTGAGTTGGGGGTATCAGCTTATGGGTTACTTCGCTTTAGAGCATGCTTATGGCCGAC
CAGAGGAGTTTCAAGATTTTGTCGAGGAGTGTCATACCCATAATATTGGGGTTATTGTGGACTGGGTACCAGGTCACTTT
ACCATCAACGATGATGCCTTAGCCTATTATGATGGGACACCGACTTTTGAATACCAAGACCATAATAAGGCTCATAACCA
TGGTTGGGGTGCCCTTAATTTTGACCTTGGAAAAAATGAAGTCCAGTCCTTCTTAATTTCTTGCATTAAGCATTGGATTG
ATGTCTATCATTTGGATGGTATTCGTGTGGATGCTGTTAGCAACATGCTCTATTTGGACTATGATGATGCTCCATGGACA
CCTAATAAAGATGGCGGAAATCTCAACTATGAAGGTTATTATTTCCTTCAGCGCTTGAATGAGGTTATTAAGTTAGAATA
TCCAGATGTGATGATGATTGCAGAAGAAAGTTCGTCTGCGACCAAGATTACGGGAATGAAAGAGATTGGTGGTCTAGGAT
TTGACTACAAATGGAACATGGGCTGGATGAATGATATCCTCCGTTTCTACGAAGAAGATCCGATCTATCGTAAATATGAC
TTTAACCTGGTGACTTTCAGCTTTATGTATGTTTTCAAGGAGAATTATCTCTTGCCATTCTCGCACGATGAAGTGGTTCA
TGGCAAGAAGAGTATGATGCATAAGATGTGGGGAGATCGTTACAATCAATTCGCAGGCTTGCGCAATCTCTATACGTACC
AAATTTGTCACCCTGGTAAGAAATTGCTCTTCATGGGTAGCGAATACGGTCAATTCCTAGAATGGAAATCTGAAGAACAG
TTGGAATGGTCTAACCTAGAAGACCCAATGAATGCTAAGATGAAGTATTTCACTTCTCAGCTAAACCAGTTTTACAAAGA
TCATCGCTGTCTGTGGGAAATCGATACCAGCTATGATGGTATTGAAATCATTGATGCGGATAATCGAGACCAGAGTGTTC
TTTCCTTTATTCGTAAGGGTAAAAAGGGAGAAATGTTAGTCTGTATCTTTAACATGGTACCTGTTGAGCGGAAAGATTTT
ACAATCGGACTACCCGTTGCAGGAATTTACGAAGAAGTATGGAATACTGAGTTGGAAGAGTGGGGAGGCGTTTGGAAAGA
ACATAATCAAACTGTTCAAACGCAAGAAGGACTATGGAAAGATTATGAGCAGACCTTAACCTTTACCCTACCGGCTATGG
GAGCAAGTGTATGGAAAATCAAACGTCGCTTGAAATCTACTAAAACCGTCACAAATAAAAACCAAAAAGGAGTAGAAAAT
GAAAAATGA

Upstream 100 bases:

>100_bases
TTTTCAAAATAATTAAAGAAGTATAGTAATTTACTTGAATCTTCTCTAAAAAGGTAGTATAATAAAAACATAGAAAACGC
TTACAGGAGAAGGGGAGTAT

Downstream 100 bases:

>100_bases
AATGTTAGCTTTGATTCTTGCTGGTGGGCAAGGAACTCGTCTCGGTAAACTCACTCAAAGCATCGCAAAACCAGCTGTGC
AATTTGGTGGGCGCTACCGT

Product: glycogen branching enzyme

Products: NA

Alternate protein names: 1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase; Glycogen-branching enzyme; BE [H]

Number of amino acids: Translated: 642; Mature: 642

Protein sequence:

>642_residues
MDNREALKTFMTGENFYLQHYLGAHREELNGEHGYTFRVWAPNAQAVHLVGDFTNWIENQIPMVRNDFGVWEVFTNMAQE
GHIYKYHVTRQNGHQLMKIDPFAVRYEARPGTGAILTELPEKKWKDGLWLARRKRWGFEERPVNIYEVHAGSWKRNSDGS
PYSFAQLKDELIPYLVEMNYTHIEFMPLMSHPLGLSWGYQLMGYFALEHAYGRPEEFQDFVEECHTHNIGVIVDWVPGHF
TINDDALAYYDGTPTFEYQDHNKAHNHGWGALNFDLGKNEVQSFLISCIKHWIDVYHLDGIRVDAVSNMLYLDYDDAPWT
PNKDGGNLNYEGYYFLQRLNEVIKLEYPDVMMIAEESSSATKITGMKEIGGLGFDYKWNMGWMNDILRFYEEDPIYRKYD
FNLVTFSFMYVFKENYLLPFSHDEVVHGKKSMMHKMWGDRYNQFAGLRNLYTYQICHPGKKLLFMGSEYGQFLEWKSEEQ
LEWSNLEDPMNAKMKYFTSQLNQFYKDHRCLWEIDTSYDGIEIIDADNRDQSVLSFIRKGKKGEMLVCIFNMVPVERKDF
TIGLPVAGIYEEVWNTELEEWGGVWKEHNQTVQTQEGLWKDYEQTLTFTLPAMGASVWKIKRRLKSTKTVTNKNQKGVEN
EK

Sequences:

>Translated_642_residues
MDNREALKTFMTGENFYLQHYLGAHREELNGEHGYTFRVWAPNAQAVHLVGDFTNWIENQIPMVRNDFGVWEVFTNMAQE
GHIYKYHVTRQNGHQLMKIDPFAVRYEARPGTGAILTELPEKKWKDGLWLARRKRWGFEERPVNIYEVHAGSWKRNSDGS
PYSFAQLKDELIPYLVEMNYTHIEFMPLMSHPLGLSWGYQLMGYFALEHAYGRPEEFQDFVEECHTHNIGVIVDWVPGHF
TINDDALAYYDGTPTFEYQDHNKAHNHGWGALNFDLGKNEVQSFLISCIKHWIDVYHLDGIRVDAVSNMLYLDYDDAPWT
PNKDGGNLNYEGYYFLQRLNEVIKLEYPDVMMIAEESSSATKITGMKEIGGLGFDYKWNMGWMNDILRFYEEDPIYRKYD
FNLVTFSFMYVFKENYLLPFSHDEVVHGKKSMMHKMWGDRYNQFAGLRNLYTYQICHPGKKLLFMGSEYGQFLEWKSEEQ
LEWSNLEDPMNAKMKYFTSQLNQFYKDHRCLWEIDTSYDGIEIIDADNRDQSVLSFIRKGKKGEMLVCIFNMVPVERKDF
TIGLPVAGIYEEVWNTELEEWGGVWKEHNQTVQTQEGLWKDYEQTLTFTLPAMGASVWKIKRRLKSTKTVTNKNQKGVEN
EK
>Mature_642_residues
MDNREALKTFMTGENFYLQHYLGAHREELNGEHGYTFRVWAPNAQAVHLVGDFTNWIENQIPMVRNDFGVWEVFTNMAQE
GHIYKYHVTRQNGHQLMKIDPFAVRYEARPGTGAILTELPEKKWKDGLWLARRKRWGFEERPVNIYEVHAGSWKRNSDGS
PYSFAQLKDELIPYLVEMNYTHIEFMPLMSHPLGLSWGYQLMGYFALEHAYGRPEEFQDFVEECHTHNIGVIVDWVPGHF
TINDDALAYYDGTPTFEYQDHNKAHNHGWGALNFDLGKNEVQSFLISCIKHWIDVYHLDGIRVDAVSNMLYLDYDDAPWT
PNKDGGNLNYEGYYFLQRLNEVIKLEYPDVMMIAEESSSATKITGMKEIGGLGFDYKWNMGWMNDILRFYEEDPIYRKYD
FNLVTFSFMYVFKENYLLPFSHDEVVHGKKSMMHKMWGDRYNQFAGLRNLYTYQICHPGKKLLFMGSEYGQFLEWKSEEQ
LEWSNLEDPMNAKMKYFTSQLNQFYKDHRCLWEIDTSYDGIEIIDADNRDQSVLSFIRKGKKGEMLVCIFNMVPVERKDF
TIGLPVAGIYEEVWNTELEEWGGVWKEHNQTVQTQEGLWKDYEQTLTFTLPAMGASVWKIKRRLKSTKTVTNKNQKGVEN
EK

Specific function: Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position [H]

COG id: COG0296

COG function: function code G; 1,4-alpha-glucan branching enzyme

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 13 family [H]

Homologues:

Organism=Homo sapiens, GI189458812, Length=615, Percent_Identity=26.1788617886179, Blast_Score=156, Evalue=6e-38,
Organism=Escherichia coli, GI1789839, Length=625, Percent_Identity=37.28, Blast_Score=453, Evalue=1e-128,
Organism=Caenorhabditis elegans, GI17554896, Length=592, Percent_Identity=24.6621621621622, Blast_Score=149, Evalue=4e-36,
Organism=Caenorhabditis elegans, GI32564391, Length=581, Percent_Identity=24.0963855421687, Blast_Score=130, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6320826, Length=654, Percent_Identity=24.0061162079511, Blast_Score=140, Evalue=4e-34,
Organism=Drosophila melanogaster, GI28573410, Length=618, Percent_Identity=25.4045307443366, Blast_Score=147, Evalue=3e-35,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006407
- InterPro:   IPR006048
- InterPro:   IPR013780
- InterPro:   IPR006047
- InterPro:   IPR004193
- InterPro:   IPR017853
- InterPro:   IPR013781
- InterPro:   IPR013783 [H]

Pfam domain/function: PF00128 Alpha-amylase; PF02806 Alpha-amylase_C; PF02922 CBM_48 [H]

EC number: =2.4.1.18 [H]

Molecular weight: Translated: 75636; Mature: 75636

Theoretical pI: Translated: 5.56; Mature: 5.56

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
3.9 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDNREALKTFMTGENFYLQHYLGAHREELNGEHGYTFRVWAPNAQAVHLVGDFTNWIENQ
CCCHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHC
IPMVRNDFGVWEVFTNMAQEGHIYKYHVTRQNGHQLMKIDPFAVRYEARPGTGAILTELP
CCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCEEEEEECCCCCCHHHHHCC
EKKWKDGLWLARRKRWGFEERPVNIYEVHAGSWKRNSDGSPYSFAQLKDELIPYLVEMNY
HHHCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHEECCC
THIEFMPLMSHPLGLSWGYQLMGYFALEHAYGRPEEFQDFVEECHTHNIGVIVDWVPGHF
CEEEEEEHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCEE
TINDDALAYYDGTPTFEYQDHNKAHNHGWGALNFDLGKNEVQSFLISCIKHWIDVYHLDG
EECCCEEEEECCCCCEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEEECC
IRVDAVSNMLYLDYDDAPWTPNKDGGNLNYEGYYFLQRLNEVIKLEYPDVMMIAEESSSA
EEEEEECCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCEEEEEECCCCC
TKITGMKEIGGLGFDYKWNMGWMNDILRFYEEDPIYRKYDFNLVTFSFMYVFKENYLLPF
EEECCHHHHCCCCCCEEECCCHHHHHHHHHCCCCCEEEECCCCHHHHHEEHHHCCEEECC
SHDEVVHGKKSMMHKMWGDRYNQFAGLRNLYTYQICHPGKKLLFMGSEYGQFLEWKSEEQ
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEECCCHHHHHCCCCCCC
LEWSNLEDPMNAKMKYFTSQLNQFYKDHRCLWEIDTSYDGIEIIDADNRDQSVLSFIRKG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHCC
KKGEMLVCIFNMVPVERKDFTIGLPVAGIYEEVWNTELEEWGGVWKEHNQTVQTQEGLWK
CCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHCCCHHHHCCHHHHCCCCCHHHHHHHH
DYEQTLTFTLPAMGASVWKIKRRLKSTKTVTNKNQKGVENEK
HHHHHEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MDNREALKTFMTGENFYLQHYLGAHREELNGEHGYTFRVWAPNAQAVHLVGDFTNWIENQ
CCCHHHHHHHHCCCCEEHHHHHHHHHHHCCCCCCEEEEEECCCCCEEEEEEHHHHHHHHC
IPMVRNDFGVWEVFTNMAQEGHIYKYHVTRQNGHQLMKIDPFAVRYEARPGTGAILTELP
CCCCCCCCHHHHHHHHHHHCCCEEEEEEEECCCCEEEEECCEEEEEECCCCCCHHHHHCC
EKKWKDGLWLARRKRWGFEERPVNIYEVHAGSWKRNSDGSPYSFAQLKDELIPYLVEMNY
HHHCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHEECCC
THIEFMPLMSHPLGLSWGYQLMGYFALEHAYGRPEEFQDFVEECHTHNIGVIVDWVPGHF
CEEEEEEHHCCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEEECCCEE
TINDDALAYYDGTPTFEYQDHNKAHNHGWGALNFDLGKNEVQSFLISCIKHWIDVYHLDG
EECCCEEEEECCCCCEEECCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHEEEECC
IRVDAVSNMLYLDYDDAPWTPNKDGGNLNYEGYYFLQRLNEVIKLEYPDVMMIAEESSSA
EEEEEECCEEEEECCCCCCCCCCCCCCCCCCHHHHHHHHHHHHEECCCCEEEEEECCCCC
TKITGMKEIGGLGFDYKWNMGWMNDILRFYEEDPIYRKYDFNLVTFSFMYVFKENYLLPF
EEECCHHHHCCCCCCEEECCCHHHHHHHHHCCCCCEEEECCCCHHHHHEEHHHCCEEECC
SHDEVVHGKKSMMHKMWGDRYNQFAGLRNLYTYQICHPGKKLLFMGSEYGQFLEWKSEEQ
CCCHHHCCHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCEEEEECCCHHHHHCCCCCCC
LEWSNLEDPMNAKMKYFTSQLNQFYKDHRCLWEIDTSYDGIEIIDADNRDQSVLSFIRKG
CCCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEECCCCCHHHHHHHHCC
KKGEMLVCIFNMVPVERKDFTIGLPVAGIYEEVWNTELEEWGGVWKEHNQTVQTQEGLWK
CCCCEEEEEECCCCCCCCCEEEECCHHHHHHHHHCCCHHHHCCHHHHCCCCCHHHHHHHH
DYEQTLTFTLPAMGASVWKIKRRLKSTKTVTNKNQKGVENEK
HHHHHEEEEEHHCCHHHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA