Click here to switch to the map view.

The map label for this gene is 169833153

Identifier: 169833153

GI number: 169833153

Start: 272805

End: 273110

Strand: Direct

Name: 169833153

Synonym: SPH_0311

Alternate gene names: NA

Gene position: 272805-273110 (Clockwise)

Preceding gene: 169834458

Following gene: 169834479

Centisome position: 12.15

GC content: 38.89

Gene sequence:

>306_bases
ATGTCACACGATCATAACCACGACCACGAAGAACGTGAACTAATCACACTAGTAGATGAGCAAGGAAATGAAACCTTGTT
TGAAATCCTTTTGACAATTGATGGAAAAGAAGAATTTGGTAAAAACTATGTTCTTCTAGTACCAGTTAACGCAGAAGAAG
ACGAAGACGGACAAGTTGAAATCCAAGCTTACTCATTCATTGAAAATGAAGATGGAACAGAAGGCGAATTGCAACCAATC
CCAGAAGACTCAGAAGACGAATGGAACATGATTGAAGAAGTCTTCAACAGCTTTATGGAGGAGTGA

Upstream 100 bases:

>100_bases
TATCAGTCGCAATAAGCGCAAGAAAGTCATTGATAAGTTAGCAGCTCAGCTGATTTTACAAAATTATTTAGATAGAAAAT
TTTAATATAAAGGAGAGGCT

Downstream 100 bases:

>100_bases
TACAGTCTGGGAGACTGTATCAGCCCAACTCCCAGAAATGGGGAAGAGTTGGAACGTCCAGTGGATGTTTTTAGCCCAGT
TCCTTTAAATAAGAGAGAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 101; Mature: 100

Protein sequence:

>101_residues
MSHDHNHDHEERELITLVDEQGNETLFEILLTIDGKEEFGKNYVLLVPVNAEEDEDGQVEIQAYSFIENEDGTEGELQPI
PEDSEDEWNMIEEVFNSFMEE

Sequences:

>Translated_101_residues
MSHDHNHDHEERELITLVDEQGNETLFEILLTIDGKEEFGKNYVLLVPVNAEEDEDGQVEIQAYSFIENEDGTEGELQPI
PEDSEDEWNMIEEVFNSFMEE
>Mature_100_residues
SHDHNHDHEERELITLVDEQGNETLFEILLTIDGKEEFGKNYVLLVPVNAEEDEDGQVEIQAYSFIENEDGTEGELQPIP
EDSEDEWNMIEEVFNSFMEE

Specific function: Unknown

COG id: COG3906

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0473 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009711 [H]

Pfam domain/function: PF06949 DUF1292 [H]

EC number: NA

Molecular weight: Translated: 11759; Mature: 11627

Theoretical pI: Translated: 3.53; Mature: 3.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHDHNHDHEERELITLVDEQGNETLFEILLTIDGKEEFGKNYVLLVPVNAEEDEDGQVE
CCCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCHHHHCCCEEEEEECCCCCCCCCEEE
IQAYSFIENEDGTEGELQPIPEDSEDEWNMIEEVFNSFMEE
EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SHDHNHDHEERELITLVDEQGNETLFEILLTIDGKEEFGKNYVLLVPVNAEEDEDGQVE
CCCCCCCCCCCEEEEEECCCCCCEEEEEEEEECCHHHHCCCEEEEEECCCCCCCCCEEE
IQAYSFIENEDGTEGELQPIPEDSEDEWNMIEEVFNSFMEE
EEEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA