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The map label for this gene is glgC [H]

Identifier: 169833116

GI number: 169833116

Start: 1115488

End: 1116630

Strand: Direct

Name: glgC [H]

Synonym: SPH_1215

Alternate gene names: 169833116

Gene position: 1115488-1116630 (Clockwise)

Preceding gene: 169833189

Following gene: 169833590

Centisome position: 49.67

GC content: 41.03

Gene sequence:

>1143_bases
ATGAAAAATGAAATGTTAGCTTTGATTCTTGCTGGTGGGCAAGGAACTCGTCTCGGTAAACTCACTCAAAGCATCGCAAA
ACCAGCTGTGCAATTTGGTGGGCGCTACCGTATCATTGACTTTGCCCTATCAAACTGTGCCAACTCAGGGATTCATAATG
TTGGGGTCGTTACACAGTATCAACCACTTGCTCTCAACAACCATATTGGGAATGGTTCAAGCTGGGGACTAGACGGTATT
AATTCAGGTGTCTCTATTCTTCAACCTTATTCTGCAAGTGAAGGAAATCGTTGGTTTGAGGGGACTAGTCACGCTATTTA
CCAAAATATCGACTATATCGACAGTGTCAATCCTGAGTATGTCTTGATTTTGTCTGGGGATCACATCTACAAAATGGACT
ATGATGATATGCTCCAGTCTCATAAGGATAATAATGCCAGCTTGACAGTAGCAGTTTTAGACGTCCCTCTTAAAGAAGCA
AGCCGTTTTGGTATCATGAACACAGATGCTAACAATCGTATTGTTGAATTTGAAGAAAAACCAGCTCAACCTAAATCTAC
AAAAGCTTCTATGGGAATCTACATTTTTGATTGGCAACGCCTTCGTAATATGTTAGTCGCTGCTGAAAAGAGCAAGGTTG
GCATGTCAGACTTTGGTAAAAATGTCATTCCAAATTACCTTGAGTCAGGTGAAAGTGTTTATGCTTACGAATTTAGTGGT
TATTGGAAAGATGTTGGTACTATTGAGTCACTTTGGGAAGCGAACATGGAGTATATTTCTCCAGAAAATGCCTTGGATAG
TCGTAACCGTCAATGGAAGATTTACTCAAGAAACTTGATTTCACCACCAAACTTCCTCGGGGCAAATGCTCATGTGGAAG
ACTCATTAGTTGTAGACGGATGTTTCGTTGATGGAACTGTTAAACATTCTATCCTTTCAACAGGCGCGCAAGTTCGCGAA
GGAGCGGAAGTCCTTGATTCAGTTATCATGAGTGGAGCTATCATTGGTCAAGGAGCTAAGATTAAACGTGCCATTATTGG
TGAAGGTGCGATTATTTCTGACGGTGTCGAAATTGATGGAACAGATGAAGTACAAGTTGTAGGATATAATGAAGTAGTGG
GGGTAGCAACAGATGAAGATTGA

Upstream 100 bases:

>100_bases
ACCTTTACCCTACCGGCTATGGGAGCAAGTGTATGGAAAATCAAACGTCGCTTGAAATCTACTAAAACCGTCACAAATAA
AAACCAAAAAGGAGTAGAAA

Downstream 100 bases:

>100_bases
TAAATATTCTGCCATTTTAGGAAATACAGTTGGTTTTCACAATATGTCGACATTGACGGACCACCGTCCAGTAGCAAGTT
TGCCATTTGGTGGGAAATAT

Product: glucose-1-phosphate adenylyltransferase

Products: NA

Alternate protein names: ADP-glucose pyrophosphorylase; ADPGlc PPase; ADP-glucose synthase [H]

Number of amino acids: Translated: 380; Mature: 380

Protein sequence:

>380_residues
MKNEMLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQYQPLALNNHIGNGSSWGLDGI
NSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDSVNPEYVLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEA
SRFGIMNTDANNRIVEFEEKPAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSG
YWKDVGTIESLWEANMEYISPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDGTVKHSILSTGAQVRE
GAEVLDSVIMSGAIIGQGAKIKRAIIGEGAIISDGVEIDGTDEVQVVGYNEVVGVATDED

Sequences:

>Translated_380_residues
MKNEMLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQYQPLALNNHIGNGSSWGLDGI
NSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDSVNPEYVLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEA
SRFGIMNTDANNRIVEFEEKPAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSG
YWKDVGTIESLWEANMEYISPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDGTVKHSILSTGAQVRE
GAEVLDSVIMSGAIIGQGAKIKRAIIGEGAIISDGVEIDGTDEVQVVGYNEVVGVATDED
>Mature_380_residues
MKNEMLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQYQPLALNNHIGNGSSWGLDGI
NSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDSVNPEYVLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEA
SRFGIMNTDANNRIVEFEEKPAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSG
YWKDVGTIESLWEANMEYISPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDGCFVDGTVKHSILSTGAQVRE
GAEVLDSVIMSGAIIGQGAKIKRAIIGEGAIISDGVEIDGTDEVQVVGYNEVVGVATDED

Specific function: Glycogen biosynthesis; first step. [C]

COG id: COG0448

COG function: function code G; ADP-glucose pyrophosphorylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial/plant glucose-1-phosphate adenylyltransferase family [H]

Homologues:

Organism=Escherichia coli, GI1789837, Length=377, Percent_Identity=41.3793103448276, Blast_Score=285, Evalue=4e-78,
Organism=Escherichia coli, GI1788351, Length=254, Percent_Identity=28.740157480315, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1790224, Length=259, Percent_Identity=27.027027027027, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI133931050, Length=371, Percent_Identity=24.7978436657682, Blast_Score=86, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6320148, Length=379, Percent_Identity=24.2744063324538, Blast_Score=84, Evalue=3e-17,
Organism=Drosophila melanogaster, GI21355443, Length=368, Percent_Identity=25.2717391304348, Blast_Score=90, Evalue=2e-18,
Organism=Drosophila melanogaster, GI24644084, Length=368, Percent_Identity=25.2717391304348, Blast_Score=90, Evalue=2e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005836
- InterPro:   IPR011831
- InterPro:   IPR023049
- InterPro:   IPR005835
- InterPro:   IPR011004 [H]

Pfam domain/function: PF00483 NTP_transferase [H]

EC number: =2.7.7.27 [H]

Molecular weight: Translated: 41491; Mature: 41491

Theoretical pI: Translated: 4.53; Mature: 4.53

Prosite motif: PS00808 ADP_GLC_PYROPHOSPH_1 ; PS00809 ADP_GLC_PYROPHOSPH_2 ; PS00810 ADP_GLC_PYROPHOSPH_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNEMLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQY
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCEEEEE
QPLALNNHIGNGSSWGLDGINSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDSVNPEY
CCEEECCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCEECCCCHHHHHCCCHHHCCCCCE
VLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEASRFGIMNTDANNRIVEFEEK
EEEEECCEEEECCHHHHHHHCCCCCCEEEEEEEECCHHHHHHCCEEECCCCCCEEEECCC
PAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSG
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHCCHHCCHHHHCCCEEEEEEECC
YWKDVGTIESLWEANMEYISPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDG
CCCCHHHHHHHHHCCHHHCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
CFVDGTVKHSILSTGAQVREGAEVLDSVIMSGAIIGQGAKIKRAIIGEGAIISDGVEIDG
EEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEECCCCCEEEEEECCCCEEECCEEECC
TDEVQVVGYNEVVGVATDED
CCCEEEEECCEEEEEEECCC
>Mature Secondary Structure
MKNEMLALILAGGQGTRLGKLTQSIAKPAVQFGGRYRIIDFALSNCANSGIHNVGVVTQY
CCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCEEEEEHHHHHHHHCCCCCCCCEEEEE
QPLALNNHIGNGSSWGLDGINSGVSILQPYSASEGNRWFEGTSHAIYQNIDYIDSVNPEY
CCEEECCCCCCCCCCCCCCCCCCHHEECCCCCCCCCCEECCCCHHHHHCCCHHHCCCCCE
VLILSGDHIYKMDYDDMLQSHKDNNASLTVAVLDVPLKEASRFGIMNTDANNRIVEFEEK
EEEEECCEEEECCHHHHHHHCCCCCCEEEEEEEECCHHHHHHCCEEECCCCCCEEEECCC
PAQPKSTKASMGIYIFDWQRLRNMLVAAEKSKVGMSDFGKNVIPNYLESGESVYAYEFSG
CCCCCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCHHHHCCHHCCHHHHCCCEEEEEEECC
YWKDVGTIESLWEANMEYISPENALDSRNRQWKIYSRNLISPPNFLGANAHVEDSLVVDG
CCCCHHHHHHHHHCCHHHCCCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCCCCEEEEE
CFVDGTVKHSILSTGAQVREGAEVLDSVIMSGAIIGQGAKIKRAIIGEGAIISDGVEIDG
EEECCHHHHHHHHCCHHHHHHHHHHHHHHHCCEEECCCCCEEEEEECCCCEEECCEEECC
TDEVQVVGYNEVVGVATDED
CCCEEEEECCEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA