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The map label for this gene is 169832997

Identifier: 169832997

GI number: 169832997

Start: 80850

End: 81194

Strand: Direct

Name: 169832997

Synonym: SPH_0108

Alternate gene names: NA

Gene position: 80850-81194 (Clockwise)

Preceding gene: 169833490

Following gene: 169832569

Centisome position: 3.6

GC content: 42.9

Gene sequence:

>345_bases
ATGAGTATCGCCATTAAAGTTGACTTGCAGAAAGCTAAACAGAAACTTTCGAACGAATCCATGACAAGAGGAAAGATTGC
AGTCGCTAGCAAAATCTTGCTAGACAATGAGCAATATATCCCCTTGAGGGGTGGAGAGTTGAGAGCTTCTGGCCGAATTG
TTGGACAAGGTGATGCTGTTGTCTATGGAACAGTTTATGCTAGAGCGCAATTTTACGGATCAAACGGCATTGTCACCTTT
AGGAGATATACCACTCCAGGTACAGGAAAACGATGGGATCAAGTTGCTACTAGTAAACATGCTGAAGAATGGGCTAGAGC
TTTTGTGAAAGGAATGGGACTTTGA

Upstream 100 bases:

>100_bases
GTGCAAAAGTAAACGATGGGATAGGAGATTATACAATTAATGGATTTCAAACTAACTATTATGATGGTGAGATATTCAGT
CAAGAAATTGAGGTGATCTA

Downstream 100 bases:

>100_bases
TGCGAGAGAATGACTTTCAAAATGTACTTTTAAAGCATATCAAGACTTTAAATTTACCAGTTGAACCACGCTTTGATTAC
TTTGAGGATGACAAAGATGA

Product: putative minor capsid protein

Products: NA

Alternate protein names: Minor Capsid Protein

Number of amino acids: Translated: 114; Mature: 113

Protein sequence:

>114_residues
MSIAIKVDLQKAKQKLSNESMTRGKIAVASKILLDNEQYIPLRGGELRASGRIVGQGDAVVYGTVYARAQFYGSNGIVTF
RRYTTPGTGKRWDQVATSKHAEEWARAFVKGMGL

Sequences:

>Translated_114_residues
MSIAIKVDLQKAKQKLSNESMTRGKIAVASKILLDNEQYIPLRGGELRASGRIVGQGDAVVYGTVYARAQFYGSNGIVTF
RRYTTPGTGKRWDQVATSKHAEEWARAFVKGMGL
>Mature_113_residues
SIAIKVDLQKAKQKLSNESMTRGKIAVASKILLDNEQYIPLRGGELRASGRIVGQGDAVVYGTVYARAQFYGSNGIVTFR
RYTTPGTGKRWDQVATSKHAEEWARAFVKGMGL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12538; Mature: 12406

Theoretical pI: Translated: 10.68; Mature: 10.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIAIKVDLQKAKQKLSNESMTRGKIAVASKILLDNEQYIPLRGGELRASGRIVGQGDAV
CEEEEEEEHHHHHHHHCCCCCCCCHHEEEEEEEECCCCEEECCCCEEEECCEEEECCCEE
VYGTVYARAQFYGSNGIVTFRRYTTPGTGKRWDQVATSKHAEEWARAFVKGMGL
EEEEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SIAIKVDLQKAKQKLSNESMTRGKIAVASKILLDNEQYIPLRGGELRASGRIVGQGDAV
EEEEEEEHHHHHHHHCCCCCCCCHHEEEEEEEECCCCEEECCCCEEEECCEEEECCCEE
VYGTVYARAQFYGSNGIVTFRRYTTPGTGKRWDQVATSKHAEEWARAFVKGMGL
EEEEEEEEEEEECCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA