| Definition | Streptococcus pneumoniae Hungary19A-6, complete genome. |
|---|---|
| Accession | NC_010380 |
| Length | 2,245,615 |
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The map label for this gene is 169832983
Identifier: 169832983
GI number: 169832983
Start: 1153504
End: 1156317
Strand: Direct
Name: 169832983
Synonym: SPH_1247
Alternate gene names: NA
Gene position: 1153504-1156317 (Clockwise)
Preceding gene: 169832380
Following gene: 169832427
Centisome position: 51.37
GC content: 38.88
Gene sequence:
>2814_bases ATGAAGGATAAAAGAGAAATTATACGTGCCCGAAAGGCATTTAGAAGAAGTTTAAAAGATGAGAAGAAATTCTTGAAACA AGGAAAGAAGGAGGTGAGAAAACAGAAAAAAGATTCCGCTGTACTGGATGAAAACGCATGGAAAAAAGAGATAAAAGAAA AGCTAGAGGAGATGAGAGAAGCTTCAAAGGCCAAAGTAAAACAAGCAAATGAAGATTATAATCATATTCTTCAAAATAGT CCTCCATCTCTTTTGAATCGGAAAGAATTAAGAGACAGACGGTTGCCTCATGCTAGGAAACGATTGAAAATAGCCAAGAA GCAATTTAGAGAAGCCAAGGTAGAAGCAAAAGAAGAAAGAAAAGAGAGTCGTAAAGAAAGAAAAACCAATCAAAAATTTC TCTACGGTCAGGAATCGAAACAAAAATCTAATTTTTTCTTTCAAGGGAAGAGTTTAGAAGAATTAAAAGCTAAGAAAGAA GTCAAGGCCGCCAAAGAAAATTTAAAATCTACTAAACAAGCCTATAAATCCAAAAAGGTTAGTAGGAAAGCCAAAACTTT CCTTTATGTCCTTGGACGTGAAGGTGGAGAGTTAGCTTCAGAAAATGAAGATTTAGAAGGCTATCGCACACTTCAAGAGA CCATTAGAAAAGGGAAACGCTACAGTCGGCTTTCTTATAATCTTGGAAAAGCTAGTGTCAAAACAGGACAAGCAACAGGT CGTTTTACCAAGAAAAGACTGACCAACACAAAAGAACGATACCATCATTTTAAGGATGGAAAAGGATGGAAACTAGCGAA AGATAATCCAAGTTCCTTTAAAAATCGGTATCGAAAATTAAAGAAACAAGGTCTTACAAGTGTCCGAAATATCTATCAAA AACTAAAAGCAGCCTTTTCCTTCTTTACATTTGCGGCTGGAAATCCTGTAACCTGGATAGTTGGAGGAATAGTCTTTCTT CTTTTACTTATGATGAGCTTCTTTTTAGGATTTTCATCTGCTAGTTTAATTCAACAAGATGAATTTGAACTAACAAAAGC TTATACCCACCTAACTTGGGAAGATGCAGAACATACTCGCACAAATGACAAAGGAATTACTTATTACACAAAAGTTGATG ATGTGATGGGGTATATGAACTTTAAATTCCATGACTATGAGTTAGACAAACCAGTTCACTTATTTAGTTCAGAAACTTAC AAGGATTATCTATCTACTTTGTGGCATGATTTAAACGATGGGGAAGATTTGAAATCCATGCAAGACCTCTATGAAACTCC TAAGTATAAACTATCGAAAGACGATCAAGAGGAAATGAAGGAACTAAAAGAAGAAGGTGTGTATGCTTCCATGCAGGAAT TGGACAATCCATTTGAGGGGAAAAGCAACGAAGATAGTCTAACCATGACTTATCGTTATGGATACTATGATTTAGACGGA AAACCTACCCTTCAGGAGTACATTCTACTAGAAGCCAAGGCTCACCAAACGATTGTCTCACCAATGGATGGAGTTGTATC TCTAGATGGCGACAATGTTATTCTCACTAACGGAAAAGGAGAGAATGAGAGTCGATTGACCTTGTATTCCATTCATAATG GCCGTGCGATTGAGGGGACAAGAGTCCTAACGGGTGATATTATTGGTGAAACACCAGACGATACAGGTTTGAAAGTTTCC TATCAAAAGTATAAGAACAAGAAAGAAAAATTGGTGTATGTCAATCCGCAATTTTATTTTCCAAAAGTCATTCAACTTCA GACCACTATCTTACCTGCCATTGGTCAGTTTGGTGGGGATGAGTTTGAACGAGCAAAACATATTTATGATTTTTTGAAAT CTCAAGGCGCAAGTCCCCAAGCCATTGCGGCTATTTTAGGAAATTGGTCGGTAGAGTCTTCTATCAATCCTAAACGAGCT GAGGGAGATTATTTATCTCCTCCAGTTGGCGCTACCGATTCCTCATGGGATGATGAAAGCTGGTTAGCGATTGGAGGACC AGCCATTTATAGTGGTGCTTATCCTAATATCCTTCATAGAGGTTTGGGGTTAGGTCAATGGACGGATACCGCAGATGGTT CAACACGTCATACAGCTTTATTGAATTATGCACGCACCCAAAATAAGAAATGGTATGATTTAGACCTCCAACTTGATTTT ATGCTTCATGGGGATAGTCCTTACTATCAAAGTTGGTTAAAGGATTTCTTTGGAAATACGGGCAGTGCAGCCAATCTCGC TCAACTCTTTCTTACCTATTGGGAGGGAAATTCTGGTGACAAACTACTGGAAAGACAAACCAGAGCCACGGAATGGTATT ACCAAATTGAAAAAGGCTTCAGCCAAACAAATGGAGGACAGGCAAAAAGTGACCCGCAATCCCTTGAAGGGGTTCGTGGA GACTTGTATGATCATTCTGTTCCTGGTGGTGGAGATGGTATGGCCTATGCCTATGGACAATGTACATGGGGTGTTGCGGC TCGTATGAACCAGTTAGGATTAAAGCTAAAAGGTAGAAATGGAGAAAAGATTTCGATCATTAATACCATGGGAAATGGTC AGGACTGGGTTGCGACAGCTTCAAGTCTTGGTGGAGAAACGGGTTCCACACCAAGAGCAGGTGCTATTGTTTCTTTTGTG GGAGGTACACATGGCACACCAGCATACTATGGTCATGTGTCTTTTGTAGAGAAAGTCTATGATGATGGTTCTTTCCTTGT GTCTGAAACCAACTATGGTGGCAACCCTAACTATACCTTTAGAAAAATCTCTCAAGCAGATAGTGCCATCAGTTTTGCTT ATACTACGAAATAG
Upstream 100 bases:
>100_bases TTGTTGTTCCCTTCAAAAATAAGATTCCTCAAGGTACTCAATTGTTTGATATTATGAGTACGGATCCTGATAAAATGGCT TCTAATTAAGGGGAAGTGGA
Downstream 100 bases:
>100_bases AAGAGTTTACACTTGAAATTTTAACCATTTTCAGGTAGAATAAATAGTGTAGATGAGTAGTCGGCTCATGGTCAATCTGA TAGTAATCTTGGACATAAGG
Product: M23 peptidase domain-containing protein
Products: NA
Alternate protein names: Surface Antigen; Immunogenic Secreted Protein; CHAP Domain Containing Protein; N-Acetylmuramoyl-L-Alanine Amidase Domain Protein; Immunogenic Secreted Protein Homologue; CHAP Domain Family N-Acetylmuramoyl-L-Alanine Amidase; Secretory Antigen SsaA; LysM Domain Protein; Transfer Protein; CHAP Domain Protein; N-AcetylMuramoyl-L-Alanine Amidase; Peptidoglycan Hydrolase
Number of amino acids: Translated: 937; Mature: 937
Protein sequence:
>937_residues MKDKREIIRARKAFRRSLKDEKKFLKQGKKEVRKQKKDSAVLDENAWKKEIKEKLEEMREASKAKVKQANEDYNHILQNS PPSLLNRKELRDRRLPHARKRLKIAKKQFREAKVEAKEERKESRKERKTNQKFLYGQESKQKSNFFFQGKSLEELKAKKE VKAAKENLKSTKQAYKSKKVSRKAKTFLYVLGREGGELASENEDLEGYRTLQETIRKGKRYSRLSYNLGKASVKTGQATG RFTKKRLTNTKERYHHFKDGKGWKLAKDNPSSFKNRYRKLKKQGLTSVRNIYQKLKAAFSFFTFAAGNPVTWIVGGIVFL LLLMMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTRTNDKGITYYTKVDDVMGYMNFKFHDYELDKPVHLFSSETY KDYLSTLWHDLNDGEDLKSMQDLYETPKYKLSKDDQEEMKELKEEGVYASMQELDNPFEGKSNEDSLTMTYRYGYYDLDG KPTLQEYILLEAKAHQTIVSPMDGVVSLDGDNVILTNGKGENESRLTLYSIHNGRAIEGTRVLTGDIIGETPDDTGLKVS YQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGDEFERAKHIYDFLKSQGASPQAIAAILGNWSVESSINPKRA EGDYLSPPVGATDSSWDDESWLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYARTQNKKWYDLDLQLDF MLHGDSPYYQSWLKDFFGNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGFSQTNGGQAKSDPQSLEGVRG DLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGRNGEKISIINTMGNGQDWVATASSLGGETGSTPRAGAIVSFV GGTHGTPAYYGHVSFVEKVYDDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK
Sequences:
>Translated_937_residues MKDKREIIRARKAFRRSLKDEKKFLKQGKKEVRKQKKDSAVLDENAWKKEIKEKLEEMREASKAKVKQANEDYNHILQNS PPSLLNRKELRDRRLPHARKRLKIAKKQFREAKVEAKEERKESRKERKTNQKFLYGQESKQKSNFFFQGKSLEELKAKKE VKAAKENLKSTKQAYKSKKVSRKAKTFLYVLGREGGELASENEDLEGYRTLQETIRKGKRYSRLSYNLGKASVKTGQATG RFTKKRLTNTKERYHHFKDGKGWKLAKDNPSSFKNRYRKLKKQGLTSVRNIYQKLKAAFSFFTFAAGNPVTWIVGGIVFL LLLMMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTRTNDKGITYYTKVDDVMGYMNFKFHDYELDKPVHLFSSETY KDYLSTLWHDLNDGEDLKSMQDLYETPKYKLSKDDQEEMKELKEEGVYASMQELDNPFEGKSNEDSLTMTYRYGYYDLDG KPTLQEYILLEAKAHQTIVSPMDGVVSLDGDNVILTNGKGENESRLTLYSIHNGRAIEGTRVLTGDIIGETPDDTGLKVS YQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGDEFERAKHIYDFLKSQGASPQAIAAILGNWSVESSINPKRA EGDYLSPPVGATDSSWDDESWLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYARTQNKKWYDLDLQLDF MLHGDSPYYQSWLKDFFGNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGFSQTNGGQAKSDPQSLEGVRG DLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGRNGEKISIINTMGNGQDWVATASSLGGETGSTPRAGAIVSFV GGTHGTPAYYGHVSFVEKVYDDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK >Mature_937_residues MKDKREIIRARKAFRRSLKDEKKFLKQGKKEVRKQKKDSAVLDENAWKKEIKEKLEEMREASKAKVKQANEDYNHILQNS PPSLLNRKELRDRRLPHARKRLKIAKKQFREAKVEAKEERKESRKERKTNQKFLYGQESKQKSNFFFQGKSLEELKAKKE VKAAKENLKSTKQAYKSKKVSRKAKTFLYVLGREGGELASENEDLEGYRTLQETIRKGKRYSRLSYNLGKASVKTGQATG RFTKKRLTNTKERYHHFKDGKGWKLAKDNPSSFKNRYRKLKKQGLTSVRNIYQKLKAAFSFFTFAAGNPVTWIVGGIVFL LLLMMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTRTNDKGITYYTKVDDVMGYMNFKFHDYELDKPVHLFSSETY KDYLSTLWHDLNDGEDLKSMQDLYETPKYKLSKDDQEEMKELKEEGVYASMQELDNPFEGKSNEDSLTMTYRYGYYDLDG KPTLQEYILLEAKAHQTIVSPMDGVVSLDGDNVILTNGKGENESRLTLYSIHNGRAIEGTRVLTGDIIGETPDDTGLKVS YQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGDEFERAKHIYDFLKSQGASPQAIAAILGNWSVESSINPKRA EGDYLSPPVGATDSSWDDESWLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYARTQNKKWYDLDLQLDF MLHGDSPYYQSWLKDFFGNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGFSQTNGGQAKSDPQSLEGVRG DLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGRNGEKISIINTMGNGQDWVATASSLGGETGSTPRAGAIVSFV GGTHGTPAYYGHVSFVEKVYDDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK
Specific function: Unknown
COG id: COG3942
COG function: function code R; Surface antigen
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 106505; Mature: 106505
Theoretical pI: Translated: 9.74; Mature: 9.74
Prosite motif: PS50911 CHAP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKDKREIIRARKAFRRSLKDEKKFLKQGKKEVRKQKKDSAVLDENAWKKEIKEKLEEMRE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHH ASKAKVKQANEDYNHILQNSPPSLLNRKELRDRRLPHARKRLKIAKKQFREAKVEAKEER HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KESRKERKTNQKFLYGQESKQKSNFFFQGKSLEELKAKKEVKAAKENLKSTKQAYKSKKV HHHHHHHHCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRKAKTFLYVLGREGGELASENEDLEGYRTLQETIRKGKRYSRLSYNLGKASVKTGQATG HHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHH RFTKKRLTNTKERYHHFKDGKGWKLAKDNPSSFKNRYRKLKKQGLTSVRNIYQKLKAAFS HHHHHHHHCHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFTFAAGNPVTWIVGGIVFLLLLMMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEECCCHHCC TNDKGITYYTKVDDVMGYMNFKFHDYELDKPVHLFSSETYKDYLSTLWHDLNDGEDLKSM CCCCCEEEEEEHHHHHHHHCCEEECEECCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHH QDLYETPKYKLSKDDQEEMKELKEEGVYASMQELDNPFEGKSNEDSLTMTYRYGYYDLDG HHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEECEEECCC KPTLQEYILLEAKAHQTIVSPMDGVVSLDGDNVILTNGKGENESRLTLYSIHNGRAIEGT CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCEEEEEEECCCCEECCC RVLTGDIIGETPDDTGLKVSYQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGD EEEECCCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCH EFERAKHIYDFLKSQGASPQAIAAILGNWSVESSINPKRAEGDYLSPPVGATDSSWDDES HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYARTQNKKWYDLDLQLDF EEEECCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEE MLHGDSPYYQSWLKDFFGNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGF EEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC SQTNGGQAKSDPQSLEGVRGDLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGRN CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCEEEECCC GEKISIINTMGNGQDWVATASSLGGETGSTPRAGAIVSFVGGTHGTPAYYGHVSFVEKVY CCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH DDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK CCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECC >Mature Secondary Structure MKDKREIIRARKAFRRSLKDEKKFLKQGKKEVRKQKKDSAVLDENAWKKEIKEKLEEMRE CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHH ASKAKVKQANEDYNHILQNSPPSLLNRKELRDRRLPHARKRLKIAKKQFREAKVEAKEER HHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH KESRKERKTNQKFLYGQESKQKSNFFFQGKSLEELKAKKEVKAAKENLKSTKQAYKSKKV HHHHHHHHCCCCEECCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH SRKAKTFLYVLGREGGELASENEDLEGYRTLQETIRKGKRYSRLSYNLGKASVKTGQATG HHHHHHEEEEEECCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCHH RFTKKRLTNTKERYHHFKDGKGWKLAKDNPSSFKNRYRKLKKQGLTSVRNIYQKLKAAFS HHHHHHHHCHHHHHHHCCCCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FFTFAAGNPVTWIVGGIVFLLLLMMSFFLGFSSASLIQQDEFELTKAYTHLTWEDAEHTR HHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCEECCCHHCC TNDKGITYYTKVDDVMGYMNFKFHDYELDKPVHLFSSETYKDYLSTLWHDLNDGEDLKSM CCCCCEEEEEEHHHHHHHHCCEEECEECCCCHHHHCCHHHHHHHHHHHHCCCCCHHHHHH QDLYETPKYKLSKDDQEEMKELKEEGVYASMQELDNPFEGKSNEDSLTMTYRYGYYDLDG HHHHHCCCCCCCCCCHHHHHHHHHCCCHHHHHHCCCCCCCCCCCCCEEEEEEECEEECCC KPTLQEYILLEAKAHQTIVSPMDGVVSLDGDNVILTNGKGENESRLTLYSIHNGRAIEGT CCCHHHHHHHHHHHHHHHHCCCCCEEEECCCEEEEECCCCCCCCEEEEEEECCCCEECCC RVLTGDIIGETPDDTGLKVSYQKYKNKKEKLVYVNPQFYFPKVIQLQTTILPAIGQFGGD EEEECCCCCCCCCCCCCEEEHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHHHCCCH EFERAKHIYDFLKSQGASPQAIAAILGNWSVESSINPKRAEGDYLSPPVGATDSSWDDES HHHHHHHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC WLAIGGPAIYSGAYPNILHRGLGLGQWTDTADGSTRHTALLNYARTQNKKWYDLDLQLDF EEEECCCHHCCCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEE MLHGDSPYYQSWLKDFFGNTGSAANLAQLFLTYWEGNSGDKLLERQTRATEWYYQIEKGF EEECCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCC SQTNGGQAKSDPQSLEGVRGDLYDHSVPGGGDGMAYAYGQCTWGVAARMNQLGLKLKGRN CCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCCEEEECCC GEKISIINTMGNGQDWVATASSLGGETGSTPRAGAIVSFVGGTHGTPAYYGHVSFVEKVY CCEEEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHH DDGSFLVSETNYGGNPNYTFRKISQADSAISFAYTTK CCCCEEEEECCCCCCCCCHHHHHHHCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA