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The map label for this gene is ygeR [C]

Identifier: 169832850

GI number: 169832850

Start: 181560

End: 182147

Strand: Direct

Name: ygeR [C]

Synonym: SPH_0207

Alternate gene names: 169832850

Gene position: 181560-182147 (Clockwise)

Preceding gene: 169832419

Following gene: 169834112

Centisome position: 8.09

GC content: 42.35

Gene sequence:

>588_bases
ATGAAATCAATAACTAAAAAGATTAAAGCAACTCTTGCAGGAGTAGCTGCCTTGTTTGCAGTATTTGCTCCATCATTTGT
ATCTGCTCAAGAATCATCAACTTACACTGTTAAAGAAGGTGATACACTTTCAGAAATCGCTGAAACTCACAACACAACAG
TTGAAAAATTGGCAGAAAACAACCACATTGATAACATTCATTTGATTTATGTTGGTCAAGAGTTGGTTATCGATGGCCCT
GTAGCGCCTGTTGCAACACCAGCGCCAGCTACTTATGCGGCACCAGCCGCTCAAGATGAAACTGTTTCAGCTCCAGTAGC
AGAAACTCCAGTAGTAAGTGAAACAGTTGTTTCAACTGTAAGCGGATCTGAAGCAGAAGCCAAAGAATGGATCGCTCAAA
AAGAATCAGGCGGTAGCTACACAGCTACAAACGGACGTTACATCGGACGTTACCAATTAACAGATTCATACCTGAACGGT
GACTACTCAGCTGAAAACCAAGAACGTGTAGCAGATGCCTATGTTGCAGGACGTTACGGTTCATGGACAGCCGCTAAAAA
CTTCTGGCTTAATAACGGCTGGTATTAA

Upstream 100 bases:

>100_bases
AATAAAAAATAATTTTGTAATATTTCTACATAAAAGTGTCAAGAAACGGTAATATTTAAAGGGTATGATAGAACTATAGA
AAGAAGGAGAATTTTCGAAT

Downstream 100 bases:

>100_bases
GAAATAACGAGCAGAATAATATGAAAAGGTCGAGGAAATCCCTCGACTTTTTTATATTTCCTTCGGTTGAGAATAGATCT
CTACTTCTTTTTTGAGATGA

Product: LysM domain-containing protein

Products: NA

Alternate protein names: LysM Domain Protein; Extracellular Protein; Aggregation Promoting Factor-Like Surface Protein; Aggregation Promoting Factor; Agregation Promoting Protein; LysM Domain-Containing Protein; Surface Protein Aggregation Promoting Factor; Extracellular Surface Protein; Cell-Wall Hydrolase; Membrane Protease Subunit Stomatin/Prohibitin Family; SH3 Type 3 Domain Protein; LysM Repeat-Containing Protein; Aggregation Promoting Factrelated Surface Protein; Aggregation Promoting Factor Surface Protein; Membrane Protease Family Stomatin/Prohibitin-Like Protein; Cell Surface Protein

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
MKSITKKIKATLAGVAALFAVFAPSFVSAQESSTYTVKEGDTLSEIAETHNTTVEKLAENNHIDNIHLIYVGQELVIDGP
VAPVATPAPATYAAPAAQDETVSAPVAETPVVSETVVSTVSGSEAEAKEWIAQKESGGSYTATNGRYIGRYQLTDSYLNG
DYSAENQERVADAYVAGRYGSWTAAKNFWLNNGWY

Sequences:

>Translated_195_residues
MKSITKKIKATLAGVAALFAVFAPSFVSAQESSTYTVKEGDTLSEIAETHNTTVEKLAENNHIDNIHLIYVGQELVIDGP
VAPVATPAPATYAAPAAQDETVSAPVAETPVVSETVVSTVSGSEAEAKEWIAQKESGGSYTATNGRYIGRYQLTDSYLNG
DYSAENQERVADAYVAGRYGSWTAAKNFWLNNGWY
>Mature_195_residues
MKSITKKIKATLAGVAALFAVFAPSFVSAQESSTYTVKEGDTLSEIAETHNTTVEKLAENNHIDNIHLIYVGQELVIDGP
VAPVATPAPATYAAPAAQDETVSAPVAETPVVSETVVSTVSGSEAEAKEWIAQKESGGSYTATNGRYIGRYQLTDSYLNG
DYSAENQERVADAYVAGRYGSWTAAKNFWLNNGWY

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Attached to the membrane by a lipid anchor (Potential) [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20863; Mature: 20863

Theoretical pI: Translated: 4.41; Mature: 4.41

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
0.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
0.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKSITKKIKATLAGVAALFAVFAPSFVSAQESSTYTVKEGDTLSEIAETHNTTVEKLAEN
CCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCHHHHHHHHHCHHHHHHHHC
NHIDNIHLIYVGQELVIDGPVAPVATPAPATYAAPAAQDETVSAPVAETPVVSETVVSTV
CCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
SGSEAEAKEWIAQKESGGSYTATNGRYIGRYQLTDSYLNGDYSAENQERVADAYVAGRYG
CCCHHHHHHHHHHCCCCCCEEECCCEEEEEEEEEHHHCCCCCCCCCHHHHHHHHHHCCCC
SWTAAKNFWLNNGWY
CCHHHCCCEECCCCC
>Mature Secondary Structure
MKSITKKIKATLAGVAALFAVFAPSFVSAQESSTYTVKEGDTLSEIAETHNTTVEKLAEN
CCHHHHHHHHHHHHHHHHHHHHCCHHHCCCCCCEEEEECCCHHHHHHHHHCHHHHHHHHC
NHIDNIHLIYVGQELVIDGPVAPVATPAPATYAAPAAQDETVSAPVAETPVVSETVVSTV
CCCCCEEEEEECCEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHC
SGSEAEAKEWIAQKESGGSYTATNGRYIGRYQLTDSYLNGDYSAENQERVADAYVAGRYG
CCCHHHHHHHHHHCCCCCCEEECCCEEEEEEEEEHHHCCCCCCCCCHHHHHHHHHHCCCC
SWTAAKNFWLNNGWY
CCHHHCCCEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA