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The map label for this gene is 169832744

Identifier: 169832744

GI number: 169832744

Start: 1147760

End: 1149637

Strand: Direct

Name: 169832744

Synonym: SPH_1242

Alternate gene names: NA

Gene position: 1147760-1149637 (Clockwise)

Preceding gene: 169833235

Following gene: 169833662

Centisome position: 51.11

GC content: 36.74

Gene sequence:

>1878_bases
ATGTACAGTGGAAAGAAATTCCTACTATTCTCACTGTTAGGTATCTTACTAGGCTATCTTTTTCATCGTTTGACGCTTTT
GTATGATTCCTATACTGGAAATACCTTAGATAAATGGACTCATCTTCTAATGGAAGGTCAAGATGAAGTTCTTCAGTCGC
CATGGAATGTTTCCTTTACTGGAAAATCAAGTGCTTTTTTTCTACTAGGCTTTGTGATGATGTTGCTGGTTTATCTCTAT
CTAGAGACTGGTAAAAAACAATACCGAGAAGGAGTAGAATACGGGAGCGCCCGTTTTGGAACTCTAAAAGAAAAGAAGCT
CTTTTACAGTAAGGAATTTTCTCATGATACGATCTTAGCACAAGATGTTCGTTTGACATTATTAGATAAAAAACCACCCC
AATATGATAGAAATAAGAATATTGCGGTGATCGGAGGTTCAGGAAGTGGGAAGACATTTCGCTTTGTGAAACCCAATCTG
ATTCAGATGAATAGTTCTAATATTGTAGTGGATCCTAAAGATCACTTGGCCGAGAAAACAGGCAAACTCTTTTTAGAACA
TGGCTACCAAGTAAAGGTGTTAGATTTAGTCAATATGAAGAACTCAGATGGCTTCAATCCTTTTCGCTATATAGAGACAG
AAAATGATTTGAATCGCATGCTGACGGTTTATTTCAATAACACCAAAGGCTCTGGCTCCCGAAGTGATCCATTTTGGGAT
GAAGCTTCTATGACTTTGGTACGAGCTTTAGCCTCTTACTTGGTCGATTTCTATAATCCACCTAAAACAAGAGAACAGCT
CATAGAAGAAAGTCGTTTAAATCAAAAGGACTACCAAAACTTGTTGAAACGTCAAAAAAAAGAAGTGGAAGAGCGAAAAA
AACGAGGGCGTTATCCAAGTTTTGCTGAAATCTCAAAACTCATTAAACACTTATCCAAGGGTGAAAACCAAGAAAAAAGT
GTCTTAGAAATTCTATTTGAAAATTATGCTAAAAAGTATGGAACTGAAAATTTTACCATGCGAAATTGGGCAGATTTTCA
AAATTATAAGGATAAGACTCTGGATTCTGTTATAGCTGTAACCACTGCTAAATTTGCCCTCTTCAATATTCAAAGTGTCA
TGGACTTGACCAAAAGAGATACCCTTGATATGAAGACATGGGGCAAGGAAAAATCAATGGTTTACTTAGTTATCCCAGAT
AATGATAGTACCTTTCGCTTTCTTTCAGCCCTCTTTTTTTCAACCGTATTTCAAACTCTAACAAGACAAGCAGATATTGA
TTTTAAGGTTCAATTGCCTCTTCATGTGAGAGTTTACTTAGATGAGTTCGCAAATATTGGAGAAATTCCAGATTTTGCTG
AACAAACCTCAACAGTTCGTTCTCGGAACATGAGTCTCGTTCCTATTCTACAAAATATTGCCCAACTTCAAGGGCTCTAT
AAAGAAAAAGAAGCTTGGAAAACCATTCTTGGGAACTGTGATAGCTTAGTCTACTTAGGTGGGAATGATGAAGATACCTT
TAAATTTATGAGTGGCTTACTCGGTAAACAAACCATTGATGTTCGAAATACTAGTCGTTCCTTTGGCCAGACAGGTTCAG
GATCCCTTTCTCATCAAAAGATTGCTCGTGATTTAATGACACCTGATGAAGTCGGAAATATGAAACGGCATGAATGCCTG
GTTCGAATTGCCAATATGCCTGTCTTTAAAAGCAAAAAATACAATTCCATCAAGCATCCAAACTGGAAGTACCTAGCCAA
TCAAGAAACCGATGAACGGTGGTGGAACTATCAAATCAATCCTTTGAATCAAAGACAAGAAAATCATCTTGAAGGCCTTA
GAATTCGTGATTTAACTTTTGAATCTAGTTTAAAATAA

Upstream 100 bases:

>100_bases
TTACCATGGATAAGTCATTAGACGATGCAATTGATGAGGTTAAATCCCAAATTACCTTTAGACAAGAAGGAGCCGTCAAA
CAGAAAGAGATGGTGAGATG

Downstream 100 bases:

>100_bases
AAATAGAAAAGAGGAAATAGATGATTACGCATTTTAAAGGTTTGGTTTATGGAGTAGACGCAAGTGCCATGTTTGCACAA
GCTATGTCTTTGTTACAGAA

Product: TraG/TraD family protein

Products: NA

Alternate protein names: TraG/TraD Family Protein; TraG Family Protein; TraG Protein; Type IV Secretory Pathway VirD4 Component; Conjugal Transfer Protein TraG; Trag Family Protein; Type IV Secretion System; TRAG Protein; Conjugal Transfer Protein; ATPase Involved In Conjugal Plasmid Transfer; Conjugal Transfer Protein TraD; Plasmid Transfer Factor TraK; TraG Conjugal Transfer Transmembrane Protein; Conjugation Protein; Ti-Type Conjugative Transfer System Protein TraG; Trag/Trad Family Protein; Conjugal Plasmid Transfer ATPase; Protein TrsK; TraG/TraD Family; Conjugative Coupling Protein; Type IV Secretory Pathway VirD4 Protein-Like Protein; Virulence VirD4-Like Protein; Type IV Secretory Pathway; Plasmid Transfer Factor; ORF Tau; Related Plasmid Transfer Complex Protein TrsK/TraK; VirD4 Conjugative Transfer Protein; TrsK Protein; Type IV Secretory Pathway VirD4 Components; Agrobacteirum Virulence; VirD4-Like Protein

Number of amino acids: Translated: 625; Mature: 625

Protein sequence:

>625_residues
MYSGKKFLLFSLLGILLGYLFHRLTLLYDSYTGNTLDKWTHLLMEGQDEVLQSPWNVSFTGKSSAFFLLGFVMMLLVYLY
LETGKKQYREGVEYGSARFGTLKEKKLFYSKEFSHDTILAQDVRLTLLDKKPPQYDRNKNIAVIGGSGSGKTFRFVKPNL
IQMNSSNIVVDPKDHLAEKTGKLFLEHGYQVKVLDLVNMKNSDGFNPFRYIETENDLNRMLTVYFNNTKGSGSRSDPFWD
EASMTLVRALASYLVDFYNPPKTREQLIEESRLNQKDYQNLLKRQKKEVEERKKRGRYPSFAEISKLIKHLSKGENQEKS
VLEILFENYAKKYGTENFTMRNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVMDLTKRDTLDMKTWGKEKSMVYLVIPD
NDSTFRFLSALFFSTVFQTLTRQADIDFKVQLPLHVRVYLDEFANIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLY
KEKEAWKTILGNCDSLVYLGGNDEDTFKFMSGLLGKQTIDVRNTSRSFGQTGSGSLSHQKIARDLMTPDEVGNMKRHECL
VRIANMPVFKSKKYNSIKHPNWKYLANQETDERWWNYQINPLNQRQENHLEGLRIRDLTFESSLK

Sequences:

>Translated_625_residues
MYSGKKFLLFSLLGILLGYLFHRLTLLYDSYTGNTLDKWTHLLMEGQDEVLQSPWNVSFTGKSSAFFLLGFVMMLLVYLY
LETGKKQYREGVEYGSARFGTLKEKKLFYSKEFSHDTILAQDVRLTLLDKKPPQYDRNKNIAVIGGSGSGKTFRFVKPNL
IQMNSSNIVVDPKDHLAEKTGKLFLEHGYQVKVLDLVNMKNSDGFNPFRYIETENDLNRMLTVYFNNTKGSGSRSDPFWD
EASMTLVRALASYLVDFYNPPKTREQLIEESRLNQKDYQNLLKRQKKEVEERKKRGRYPSFAEISKLIKHLSKGENQEKS
VLEILFENYAKKYGTENFTMRNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVMDLTKRDTLDMKTWGKEKSMVYLVIPD
NDSTFRFLSALFFSTVFQTLTRQADIDFKVQLPLHVRVYLDEFANIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLY
KEKEAWKTILGNCDSLVYLGGNDEDTFKFMSGLLGKQTIDVRNTSRSFGQTGSGSLSHQKIARDLMTPDEVGNMKRHECL
VRIANMPVFKSKKYNSIKHPNWKYLANQETDERWWNYQINPLNQRQENHLEGLRIRDLTFESSLK
>Mature_625_residues
MYSGKKFLLFSLLGILLGYLFHRLTLLYDSYTGNTLDKWTHLLMEGQDEVLQSPWNVSFTGKSSAFFLLGFVMMLLVYLY
LETGKKQYREGVEYGSARFGTLKEKKLFYSKEFSHDTILAQDVRLTLLDKKPPQYDRNKNIAVIGGSGSGKTFRFVKPNL
IQMNSSNIVVDPKDHLAEKTGKLFLEHGYQVKVLDLVNMKNSDGFNPFRYIETENDLNRMLTVYFNNTKGSGSRSDPFWD
EASMTLVRALASYLVDFYNPPKTREQLIEESRLNQKDYQNLLKRQKKEVEERKKRGRYPSFAEISKLIKHLSKGENQEKS
VLEILFENYAKKYGTENFTMRNWADFQNYKDKTLDSVIAVTTAKFALFNIQSVMDLTKRDTLDMKTWGKEKSMVYLVIPD
NDSTFRFLSALFFSTVFQTLTRQADIDFKVQLPLHVRVYLDEFANIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLY
KEKEAWKTILGNCDSLVYLGGNDEDTFKFMSGLLGKQTIDVRNTSRSFGQTGSGSLSHQKIARDLMTPDEVGNMKRHECL
VRIANMPVFKSKKYNSIKHPNWKYLANQETDERWWNYQINPLNQRQENHLEGLRIRDLTFESSLK

Specific function: Unknown

COG id: COG3505

COG function: function code U; Type IV secretory pathway, VirD4 components

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72510; Mature: 72510

Theoretical pI: Translated: 9.62; Mature: 9.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MYSGKKFLLFSLLGILLGYLFHRLTLLYDSYTGNTLDKWTHLLMEGQDEVLQSPWNVSFT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCEEEC
GKSSAFFLLGFVMMLLVYLYLETGKKQYREGVEYGSARFGTLKEKKLFYSKEFSHDTILA
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEC
QDVRLTLLDKKPPQYDRNKNIAVIGGSGSGKTFRFVKPNLIQMNSSNIVVDPKDHLAEKT
CCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEECCCCEEECCHHHHHHHH
GKLFLEHGYQVKVLDLVNMKNSDGFNPFRYIETENDLNRMLTVYFNNTKGSGSRSDPFWD
HHHHHHCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCC
EASMTLVRALASYLVDFYNPPKTREQLIEESRLNQKDYQNLLKRQKKEVEERKKRGRYPS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
FAEISKLIKHLSKGENQEKSVLEILFENYAKKYGTENFTMRNWADFQNYKDKTLDSVIAV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
TTAKFALFNIQSVMDLTKRDTLDMKTWGKEKSMVYLVIPDNDSTFRFLSALFFSTVFQTL
HHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
TRQADIDFKVQLPLHVRVYLDEFANIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLY
HHCCCCCEEEECCEEEEEEEHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KEKEAWKTILGNCDSLVYLGGNDEDTFKFMSGLLGKQTIDVRNTSRSFGQTGSGSLSHQK
HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCHHCCCCCCCCCHHHH
IARDLMTPDEVGNMKRHECLVRIANMPVFKSKKYNSIKHPNWKYLANQETDERWWNYQIN
HHHHCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCEECC
PLNQRQENHLEGLRIRDLTFESSLK
CCCHHHHHHCCCCEEEEECCCCCCC
>Mature Secondary Structure
MYSGKKFLLFSLLGILLGYLFHRLTLLYDSYTGNTLDKWTHLLMEGQDEVLQSPWNVSFT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHCCCHHHHCCCCCEEEC
GKSSAFFLLGFVMMLLVYLYLETGKKQYREGVEYGSARFGTLKEKKLFYSKEFSHDTILA
CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCCCCEEC
QDVRLTLLDKKPPQYDRNKNIAVIGGSGSGKTFRFVKPNLIQMNSSNIVVDPKDHLAEKT
CCEEEEEECCCCCCCCCCCCEEEEECCCCCCEEEEECCCEEEECCCCEEECCHHHHHHHH
GKLFLEHGYQVKVLDLVNMKNSDGFNPFRYIETENDLNRMLTVYFNNTKGSGSRSDPFWD
HHHHHHCCCEEEEEEEECCCCCCCCCCEEEEECCCCCCCEEEEEEECCCCCCCCCCCCCC
EASMTLVRALASYLVDFYNPPKTREQLIEESRLNQKDYQNLLKRQKKEVEERKKRGRYPS
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCC
FAEISKLIKHLSKGENQEKSVLEILFENYAKKYGTENFTMRNWADFQNYKDKTLDSVIAV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
TTAKFALFNIQSVMDLTKRDTLDMKTWGKEKSMVYLVIPDNDSTFRFLSALFFSTVFQTL
HHHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHH
TRQADIDFKVQLPLHVRVYLDEFANIGEIPDFAEQTSTVRSRNMSLVPILQNIAQLQGLY
HHCCCCCEEEECCEEEEEEEHHHCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHH
KEKEAWKTILGNCDSLVYLGGNDEDTFKFMSGLLGKQTIDVRNTSRSFGQTGSGSLSHQK
HHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHCCCEEEECCCCHHCCCCCCCCCHHHH
IARDLMTPDEVGNMKRHECLVRIANMPVFKSKKYNSIKHPNWKYLANQETDERWWNYQIN
HHHHCCCCHHHCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCEECCCCCCHHHCCEECC
PLNQRQENHLEGLRIRDLTFESSLK
CCCHHHHHHCCCCEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA