| Definition | Streptococcus pneumoniae Hungary19A-6, complete genome. |
|---|---|
| Accession | NC_010380 |
| Length | 2,245,615 |
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The map label for this gene is cshB [H]
Identifier: 169832682
GI number: 169832682
Start: 798668
End: 800011
Strand: Direct
Name: cshB [H]
Synonym: SPH_0861
Alternate gene names: 169832682
Gene position: 798668-800011 (Clockwise)
Preceding gene: 169834285
Following gene: 169833973
Centisome position: 35.57
GC content: 40.77
Gene sequence:
>1344_bases ATGTCATTTACGAAATTTCAATTTAAAAACTATATTAGAGAAGCCTTGGAGGAGTTAAAATTTACAACTCCAACAGAGGT GCAAGACAAGTTGATTCCTATTGTTTTGGCAGGTCGTGACCTAGTAGGAGAATCAAAAACAGGTTCAGGTAAGACTCATA CTTTCTTGTTACCGATTTTCCAGCAATTAGATGAAGCTAGCGATAGTGTACAAGCAGTGATTACTGCACCGAGTCGTGAG TTGGCTACTCAAATTTACCAAGTAGCGCGTCAGATTTCAGCTCACTCAGATGTCGAAGTTCGTGTGGTTAATTATGTGGG TGGTACGGATAAGGCTCGCCAGATTGAGAAATTGGCAAGCAATCAGCCTCATATTGTTATTGGAACACCAGGCCGTATCT ACGACTTGGTTAAATCTGGTGATTTAGCTATTCATAAAGCCAAGACATTTGTTGTTGATGAAGCAGATATGACCTTGGAT ATGGGATTCTTGGAAACTGTTGATAAGATTGCTGGCAGTCTTCCAAAAGACTTGCAATTCATGGTCTTCTCAGCGACTAT CCCACAAAAACTGCAACCATTCTTGAAAAAATACTTATCAAATCCTGTTATGGAGAAAATTAAGACCAAAACGGTTATTT CTGACACCATTGATAATTGGTTGATTTCGACCAAGGGACATGATAAGAATGCTCAAATTTACCAGTTGACTCAGTTGATG CAGCCGTATTTGGCAATGATTTTTGTTAACACTAAAACGCGTGCTGATGAATTGCATTCATATCTGACTGCTCAAGGCTT GAAGGTTGCAAAAATCCATGGCGATATTGCCCCTCGTGAACGCAAGCGAATCATGAATCAGGTGCAAAATCTGGATTTTG AGTATATTGTCGCAACAGATTTGGCAGCGCGTGGGATTGACATTGAAGGTGTCAGCCATGTCATCAATGATGCCATTCCG CAAGACTTATCTTTTTTTGTTCATCGTGTTGGTCGTACTGGACGAAATGGCCTACCAGGTACAGCTATTACCCTTTATCA GCCAAGTGATGACTCGGATATCCGTGAGTTGGAGAAATTGGGAATCAAGTTTAGTCCTAAGATGGTCAAAGACGGGGAAT TTCAAGATACCTATGACCGTGATCGTCGTGCCAACCGTGAGAAAAAACAAGATAAACTTGATATCGAAATGATTGGTTTG GTTAAAAAGAAAAAGAAAAAAGTCAAACCGGGTTATAAGAAGAAAATTCAATGGGCGGTTGATGAAAAGCGCCGTAAAAC CAAGCGTGCTGAAAATCGCGCTCGCGGTCGTGCAGAGCGTAAAGCTAAACGCCAAACATTTTAA
Upstream 100 bases:
>100_bases TCTTACTAGAGAAGCTACTGGAAATAGCCTAAATAAGTGAGACTACTGTAATGGAATAAAATATGGTATAATTGATAAGA TAGATAGAATCGAGGATGTT
Downstream 100 bases:
>100_bases TAGAAATTGTTGGAGTATTGAGCTCCAACTTTTTGCTTTATGAGAACGAACTATCTAAACCGAAACACTACATTAAAGAC TGCAAATTGCGATTAAAAAT
Product: ATP-dependent RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 447; Mature: 446
Protein sequence:
>447_residues MSFTKFQFKNYIREALEELKFTTPTEVQDKLIPIVLAGRDLVGESKTGSGKTHTFLLPIFQQLDEASDSVQAVITAPSRE LATQIYQVARQISAHSDVEVRVVNYVGGTDKARQIEKLASNQPHIVIGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLD MGFLETVDKIAGSLPKDLQFMVFSATIPQKLQPFLKKYLSNPVMEKIKTKTVISDTIDNWLISTKGHDKNAQIYQLTQLM QPYLAMIFVNTKTRADELHSYLTAQGLKVAKIHGDIAPRERKRIMNQVQNLDFEYIVATDLAARGIDIEGVSHVINDAIP QDLSFFVHRVGRTGRNGLPGTAITLYQPSDDSDIRELEKLGIKFSPKMVKDGEFQDTYDRDRRANREKKQDKLDIEMIGL VKKKKKKVKPGYKKKIQWAVDEKRRKTKRAENRARGRAERKAKRQTF
Sequences:
>Translated_447_residues MSFTKFQFKNYIREALEELKFTTPTEVQDKLIPIVLAGRDLVGESKTGSGKTHTFLLPIFQQLDEASDSVQAVITAPSRE LATQIYQVARQISAHSDVEVRVVNYVGGTDKARQIEKLASNQPHIVIGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLD MGFLETVDKIAGSLPKDLQFMVFSATIPQKLQPFLKKYLSNPVMEKIKTKTVISDTIDNWLISTKGHDKNAQIYQLTQLM QPYLAMIFVNTKTRADELHSYLTAQGLKVAKIHGDIAPRERKRIMNQVQNLDFEYIVATDLAARGIDIEGVSHVINDAIP QDLSFFVHRVGRTGRNGLPGTAITLYQPSDDSDIRELEKLGIKFSPKMVKDGEFQDTYDRDRRANREKKQDKLDIEMIGL VKKKKKKVKPGYKKKIQWAVDEKRRKTKRAENRARGRAERKAKRQTF >Mature_446_residues SFTKFQFKNYIREALEELKFTTPTEVQDKLIPIVLAGRDLVGESKTGSGKTHTFLLPIFQQLDEASDSVQAVITAPSREL ATQIYQVARQISAHSDVEVRVVNYVGGTDKARQIEKLASNQPHIVIGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLDM GFLETVDKIAGSLPKDLQFMVFSATIPQKLQPFLKKYLSNPVMEKIKTKTVISDTIDNWLISTKGHDKNAQIYQLTQLMQ PYLAMIFVNTKTRADELHSYLTAQGLKVAKIHGDIAPRERKRIMNQVQNLDFEYIVATDLAARGIDIEGVSHVINDAIPQ DLSFFVHRVGRTGRNGLPGTAITLYQPSDDSDIRELEKLGIKFSPKMVKDGEFQDTYDRDRRANREKKQDKLDIEMIGLV KKKKKKVKPGYKKKIQWAVDEKRRKTKRAENRARGRAERKAKRQTF
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI301171467, Length=369, Percent_Identity=34.9593495934959, Blast_Score=208, Evalue=7e-54, Organism=Homo sapiens, GI301171475, Length=369, Percent_Identity=34.9593495934959, Blast_Score=208, Evalue=1e-53, Organism=Homo sapiens, GI87196351, Length=369, Percent_Identity=34.9593495934959, Blast_Score=207, Evalue=1e-53, Organism=Homo sapiens, GI169881239, Length=369, Percent_Identity=34.9593495934959, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI13514809, Length=369, Percent_Identity=34.9593495934959, Blast_Score=206, Evalue=3e-53, Organism=Homo sapiens, GI164664518, Length=369, Percent_Identity=32.2493224932249, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI148613856, Length=390, Percent_Identity=33.8461538461538, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI38201710, Length=390, Percent_Identity=33.8461538461538, Blast_Score=203, Evalue=2e-52, Organism=Homo sapiens, GI7661920, Length=343, Percent_Identity=31.7784256559767, Blast_Score=200, Evalue=2e-51, Organism=Homo sapiens, GI20149629, Length=388, Percent_Identity=32.9896907216495, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI262118318, Length=373, Percent_Identity=32.7077747989276, Blast_Score=192, Evalue=7e-49, Organism=Homo sapiens, GI45446747, Length=423, Percent_Identity=31.6784869976359, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI45446743, Length=423, Percent_Identity=31.6784869976359, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI216548263, Length=373, Percent_Identity=32.7077747989276, Blast_Score=191, Evalue=1e-48, Organism=Homo sapiens, GI262231852, Length=373, Percent_Identity=32.7077747989276, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI13518015, Length=373, Percent_Identity=32.7077747989276, Blast_Score=191, Evalue=2e-48, Organism=Homo sapiens, GI21040371, Length=354, Percent_Identity=31.638418079096, Blast_Score=190, Evalue=2e-48, Organism=Homo sapiens, GI164419743, Length=334, Percent_Identity=33.5329341317365, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI51094101, Length=334, Percent_Identity=33.5329341317365, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI4758112, Length=354, Percent_Identity=31.3559322033898, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI18375623, Length=354, Percent_Identity=31.3559322033898, Blast_Score=188, Evalue=9e-48, Organism=Homo sapiens, GI4758138, Length=369, Percent_Identity=31.7073170731707, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI188035877, Length=401, Percent_Identity=29.925187032419, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI41327773, Length=354, Percent_Identity=33.8983050847458, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI21071032, Length=374, Percent_Identity=31.0160427807487, Blast_Score=184, Evalue=2e-46, Organism=Homo sapiens, GI224593278, Length=366, Percent_Identity=30.327868852459, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI83700235, Length=361, Percent_Identity=31.5789473684211, Blast_Score=182, Evalue=6e-46, Organism=Homo sapiens, GI222352149, Length=353, Percent_Identity=32.8611898016997, Blast_Score=182, Evalue=7e-46, Organism=Homo sapiens, GI4503529, Length=361, Percent_Identity=31.0249307479224, Blast_Score=182, Evalue=8e-46, Organism=Homo sapiens, GI50659095, Length=357, Percent_Identity=33.8935574229692, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI13129006, Length=361, Percent_Identity=33.5180055401662, Blast_Score=176, Evalue=3e-44, Organism=Homo sapiens, GI31542656, Length=366, Percent_Identity=31.6939890710383, Blast_Score=175, Evalue=7e-44, Organism=Homo sapiens, GI41327779, Length=363, Percent_Identity=31.9559228650138, Blast_Score=175, Evalue=9e-44, Organism=Homo sapiens, GI41327776, Length=388, Percent_Identity=32.4742268041237, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI41327771, Length=401, Percent_Identity=30.1745635910224, Blast_Score=173, Evalue=3e-43, Organism=Homo sapiens, GI55749865, Length=345, Percent_Identity=31.304347826087, Blast_Score=170, Evalue=2e-42, Organism=Homo sapiens, GI256223453, Length=400, Percent_Identity=30.5, Blast_Score=169, Evalue=5e-42, Organism=Homo sapiens, GI13514831, Length=367, Percent_Identity=28.8828337874659, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI6005743, Length=391, Percent_Identity=29.923273657289, Blast_Score=159, Evalue=6e-39, Organism=Homo sapiens, GI8922886, Length=391, Percent_Identity=29.4117647058824, Blast_Score=154, Evalue=1e-37, Organism=Homo sapiens, GI62241022, Length=374, Percent_Identity=30.4812834224599, Blast_Score=154, Evalue=2e-37, Organism=Homo sapiens, GI9506931, Length=398, Percent_Identity=25.6281407035176, Blast_Score=153, Evalue=3e-37, Organism=Homo sapiens, GI38327634, Length=362, Percent_Identity=29.5580110497238, Blast_Score=146, Evalue=3e-35, Organism=Homo sapiens, GI38569505, Length=347, Percent_Identity=29.1066282420749, Blast_Score=146, Evalue=5e-35, Organism=Homo sapiens, GI38569503, Length=347, Percent_Identity=29.1066282420749, Blast_Score=144, Evalue=1e-34, Organism=Homo sapiens, GI62241024, Length=352, Percent_Identity=30.3977272727273, Blast_Score=142, Evalue=5e-34, Organism=Homo sapiens, GI164419732, Length=344, Percent_Identity=27.6162790697674, Blast_Score=139, Evalue=7e-33, Organism=Homo sapiens, GI256773275, Length=395, Percent_Identity=28.6075949367089, Blast_Score=131, Evalue=1e-30, Organism=Homo sapiens, GI4826686, Length=335, Percent_Identity=29.2537313432836, Blast_Score=128, Evalue=9e-30, Organism=Homo sapiens, GI17505907, Length=405, Percent_Identity=25.9259259259259, Blast_Score=116, Evalue=4e-26, Organism=Homo sapiens, GI9966805, Length=333, Percent_Identity=28.2282282282282, Blast_Score=108, Evalue=1e-23, Organism=Homo sapiens, GI154759257, Length=361, Percent_Identity=26.0387811634349, Blast_Score=104, Evalue=2e-22, Organism=Homo sapiens, GI20336298, Length=195, Percent_Identity=31.2820512820513, Blast_Score=82, Evalue=9e-16, Organism=Escherichia coli, GI87082221, Length=358, Percent_Identity=34.6368715083799, Blast_Score=220, Evalue=2e-58, Organism=Escherichia coli, GI1787016, Length=378, Percent_Identity=32.5396825396825, Blast_Score=199, Evalue=4e-52, Organism=Escherichia coli, GI1787605, Length=352, Percent_Identity=32.9545454545455, Blast_Score=194, Evalue=1e-50, Organism=Escherichia coli, GI1790214, Length=352, Percent_Identity=33.2386363636364, Blast_Score=192, Evalue=4e-50, Organism=Escherichia coli, GI1788930, Length=342, Percent_Identity=33.3333333333333, Blast_Score=180, Evalue=2e-46, Organism=Escherichia coli, GI48994977, Length=111, Percent_Identity=27.027027027027, Blast_Score=64, Evalue=2e-11, Organism=Caenorhabditis elegans, GI71987143, Length=364, Percent_Identity=31.3186813186813, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI71982858, Length=365, Percent_Identity=33.972602739726, Blast_Score=202, Evalue=3e-52, Organism=Caenorhabditis elegans, GI71995724, Length=359, Percent_Identity=30.08356545961, Blast_Score=201, Evalue=6e-52, Organism=Caenorhabditis elegans, GI17507121, Length=359, Percent_Identity=29.8050139275766, Blast_Score=201, Evalue=8e-52, Organism=Caenorhabditis elegans, GI17510307, Length=381, Percent_Identity=34.3832020997375, Blast_Score=197, Evalue=7e-51, Organism=Caenorhabditis elegans, GI17510309, Length=381, Percent_Identity=34.3832020997375, Blast_Score=197, Evalue=8e-51, Organism=Caenorhabditis elegans, GI71995514, Length=381, Percent_Identity=34.3832020997375, Blast_Score=197, Evalue=1e-50, Organism=Caenorhabditis elegans, GI17507945, Length=373, Percent_Identity=32.4396782841823, Blast_Score=196, Evalue=2e-50, Organism=Caenorhabditis elegans, GI17552114, Length=363, Percent_Identity=31.404958677686, Blast_Score=195, Evalue=4e-50, Organism=Caenorhabditis elegans, GI17552642, Length=406, Percent_Identity=32.7586206896552, Blast_Score=186, Evalue=3e-47, Organism=Caenorhabditis elegans, GI193206561, Length=338, Percent_Identity=32.2485207100592, Blast_Score=183, Evalue=1e-46, Organism=Caenorhabditis elegans, GI86570094, Length=367, Percent_Identity=34.0599455040872, Blast_Score=183, Evalue=1e-46, Organism=Caenorhabditis elegans, GI71995718, Length=380, Percent_Identity=31.8421052631579, Blast_Score=182, Evalue=3e-46, Organism=Caenorhabditis elegans, GI17537549, Length=354, Percent_Identity=32.2033898305085, Blast_Score=180, Evalue=1e-45, Organism=Caenorhabditis elegans, GI71999644, Length=337, Percent_Identity=30.5637982195846, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI71999646, Length=337, Percent_Identity=30.5637982195846, Blast_Score=179, Evalue=2e-45, Organism=Caenorhabditis elegans, GI17555296, Length=407, Percent_Identity=29.7297297297297, Blast_Score=178, Evalue=4e-45, Organism=Caenorhabditis elegans, GI115533224, Length=350, Percent_Identity=31.7142857142857, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI32565321, Length=378, Percent_Identity=30.6878306878307, Blast_Score=170, Evalue=1e-42, Organism=Caenorhabditis elegans, GI17507877, Length=393, Percent_Identity=32.5699745547074, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17507879, Length=390, Percent_Identity=31.7948717948718, Blast_Score=169, Evalue=2e-42, Organism=Caenorhabditis elegans, GI17510559, Length=388, Percent_Identity=27.5773195876289, Blast_Score=167, Evalue=1e-41, Organism=Caenorhabditis elegans, GI17507881, Length=390, Percent_Identity=31.5384615384615, Blast_Score=162, Evalue=4e-40, Organism=Caenorhabditis elegans, GI115532548, Length=401, Percent_Identity=28.428927680798, Blast_Score=162, Evalue=5e-40, Organism=Caenorhabditis elegans, GI115532546, Length=413, Percent_Identity=27.8450363196126, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17509811, Length=374, Percent_Identity=28.6096256684492, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17507641, Length=397, Percent_Identity=27.7078085642317, Blast_Score=150, Evalue=1e-36, Organism=Caenorhabditis elegans, GI71990816, Length=375, Percent_Identity=28.8, Blast_Score=147, Evalue=9e-36, Organism=Caenorhabditis elegans, GI17505370, Length=359, Percent_Identity=30.3621169916435, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI25148203, Length=425, Percent_Identity=24.7058823529412, Blast_Score=144, Evalue=9e-35, Organism=Caenorhabditis elegans, GI193208216, Length=386, Percent_Identity=30.0518134715026, Blast_Score=142, Evalue=4e-34, Organism=Caenorhabditis elegans, GI17536099, Length=380, Percent_Identity=29.2105263157895, Blast_Score=141, Evalue=7e-34, Organism=Caenorhabditis elegans, GI32564046, Length=379, Percent_Identity=27.4406332453826, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17536101, Length=380, Percent_Identity=29.2105263157895, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17553716, Length=340, Percent_Identity=26.1764705882353, Blast_Score=138, Evalue=5e-33, Organism=Caenorhabditis elegans, GI17536103, Length=380, Percent_Identity=29.2105263157895, Blast_Score=137, Evalue=2e-32, Organism=Caenorhabditis elegans, GI71982862, Length=224, Percent_Identity=35.2678571428571, Blast_Score=131, Evalue=6e-31, Organism=Caenorhabditis elegans, GI17508543, Length=358, Percent_Identity=27.3743016759777, Blast_Score=117, Evalue=9e-27, Organism=Caenorhabditis elegans, GI17556951, Length=317, Percent_Identity=27.1293375394322, Blast_Score=117, Evalue=2e-26, Organism=Caenorhabditis elegans, GI25148205, Length=357, Percent_Identity=23.5294117647059, Blast_Score=106, Evalue=2e-23, Organism=Caenorhabditis elegans, GI25148291, Length=337, Percent_Identity=24.6290801186944, Blast_Score=105, Evalue=4e-23, Organism=Caenorhabditis elegans, GI71997889, Length=356, Percent_Identity=25.8426966292135, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI71987152, Length=97, Percent_Identity=36.0824742268041, Blast_Score=71, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6325138, Length=379, Percent_Identity=33.7730870712401, Blast_Score=207, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6324778, Length=380, Percent_Identity=33.6842105263158, Blast_Score=206, Evalue=4e-54, Organism=Saccharomyces cerevisiae, GI6320224, Length=372, Percent_Identity=30.6451612903226, Blast_Score=203, Evalue=5e-53, Organism=Saccharomyces cerevisiae, GI6324217, Length=354, Percent_Identity=34.4632768361582, Blast_Score=202, Evalue=8e-53, Organism=Saccharomyces cerevisiae, GI6321856, Length=369, Percent_Identity=34.6883468834688, Blast_Score=193, Evalue=5e-50, Organism=Saccharomyces cerevisiae, GI6320119, Length=372, Percent_Identity=31.4516129032258, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6320041, Length=362, Percent_Identity=30.6629834254144, Blast_Score=186, Evalue=6e-48, Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=31.6666666666667, Blast_Score=185, Evalue=2e-47, Organism=Saccharomyces cerevisiae, GI6320173, Length=401, Percent_Identity=31.1720698254364, Blast_Score=182, Evalue=6e-47, Organism=Saccharomyces cerevisiae, GI6324620, Length=354, Percent_Identity=31.0734463276836, Blast_Score=180, Evalue=4e-46, Organism=Saccharomyces cerevisiae, GI6321963, Length=395, Percent_Identity=33.4177215189873, Blast_Score=180, Evalue=5e-46, Organism=Saccharomyces cerevisiae, GI6321360, Length=363, Percent_Identity=31.129476584022, Blast_Score=176, Evalue=7e-45, Organism=Saccharomyces cerevisiae, GI6322912, Length=341, Percent_Identity=33.4310850439883, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6322323, Length=341, Percent_Identity=33.4310850439883, Blast_Score=175, Evalue=1e-44, Organism=Saccharomyces cerevisiae, GI6319714, Length=359, Percent_Identity=30.6406685236769, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6322427, Length=351, Percent_Identity=29.9145299145299, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6320449, Length=386, Percent_Identity=29.7927461139896, Blast_Score=160, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6320400, Length=385, Percent_Identity=30.6493506493506, Blast_Score=158, Evalue=2e-39, Organism=Saccharomyces cerevisiae, GI6321267, Length=405, Percent_Identity=32.0987654320988, Blast_Score=157, Evalue=3e-39, Organism=Saccharomyces cerevisiae, GI6321111, Length=375, Percent_Identity=29.3333333333333, Blast_Score=155, Evalue=2e-38, Organism=Saccharomyces cerevisiae, GI6323947, Length=342, Percent_Identity=29.8245614035088, Blast_Score=151, Evalue=2e-37, Organism=Saccharomyces cerevisiae, GI6323306, Length=513, Percent_Identity=24.7563352826511, Blast_Score=145, Evalue=1e-35, Organism=Saccharomyces cerevisiae, GI6319618, Length=417, Percent_Identity=27.0983213429257, Blast_Score=137, Evalue=5e-33, Organism=Saccharomyces cerevisiae, GI6322876, Length=416, Percent_Identity=24.0384615384615, Blast_Score=94, Evalue=5e-20, Organism=Saccharomyces cerevisiae, GI6324366, Length=361, Percent_Identity=23.5457063711911, Blast_Score=89, Evalue=2e-18, Organism=Drosophila melanogaster, GI28574962, Length=368, Percent_Identity=35.054347826087, Blast_Score=211, Evalue=9e-55, Organism=Drosophila melanogaster, GI24645031, Length=362, Percent_Identity=31.4917127071823, Blast_Score=203, Evalue=2e-52, Organism=Drosophila melanogaster, GI17985987, Length=388, Percent_Identity=32.4742268041237, Blast_Score=201, Evalue=1e-51, Organism=Drosophila melanogaster, GI24644479, Length=357, Percent_Identity=32.7731092436975, Blast_Score=198, Evalue=5e-51, Organism=Drosophila melanogaster, GI24644483, Length=357, Percent_Identity=32.7731092436975, Blast_Score=198, Evalue=6e-51, Organism=Drosophila melanogaster, GI281361218, Length=357, Percent_Identity=32.7731092436975, Blast_Score=198, Evalue=7e-51, Organism=Drosophila melanogaster, GI24644481, Length=357, Percent_Identity=32.7731092436975, Blast_Score=198, Evalue=7e-51, Organism=Drosophila melanogaster, GI24644487, Length=357, Percent_Identity=32.7731092436975, Blast_Score=198, Evalue=8e-51, Organism=Drosophila melanogaster, GI45551833, Length=357, Percent_Identity=32.7731092436975, Blast_Score=198, Evalue=8e-51, Organism=Drosophila melanogaster, GI24644485, Length=357, Percent_Identity=32.7731092436975, Blast_Score=198, Evalue=8e-51, Organism=Drosophila melanogaster, GI24584399, Length=359, Percent_Identity=33.1476323119777, Blast_Score=197, Evalue=1e-50, Organism=Drosophila melanogaster, GI24583279, Length=369, Percent_Identity=31.7073170731707, Blast_Score=195, Evalue=4e-50, Organism=Drosophila melanogaster, GI24583281, Length=369, Percent_Identity=31.7073170731707, Blast_Score=195, Evalue=4e-50, Organism=Drosophila melanogaster, GI17977678, Length=365, Percent_Identity=32.8767123287671, Blast_Score=192, Evalue=4e-49, Organism=Drosophila melanogaster, GI28575014, Length=341, Percent_Identity=31.3782991202346, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24585582, Length=399, Percent_Identity=30.8270676691729, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI18857967, Length=371, Percent_Identity=30.7277628032345, Blast_Score=185, Evalue=4e-47, Organism=Drosophila melanogaster, GI24582080, Length=360, Percent_Identity=31.1111111111111, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI24582078, Length=360, Percent_Identity=31.1111111111111, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI17136248, Length=360, Percent_Identity=31.1111111111111, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI24582075, Length=360, Percent_Identity=31.1111111111111, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI24581954, Length=365, Percent_Identity=32.3287671232877, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI24581952, Length=365, Percent_Identity=32.3287671232877, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI24581956, Length=365, Percent_Identity=32.3287671232877, Blast_Score=185, Evalue=6e-47, Organism=Drosophila melanogaster, GI24642151, Length=347, Percent_Identity=33.4293948126801, Blast_Score=184, Evalue=2e-46, Organism=Drosophila melanogaster, GI24662330, Length=362, Percent_Identity=30.6629834254144, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI21356161, Length=352, Percent_Identity=30.6818181818182, Blast_Score=183, Evalue=3e-46, Organism=Drosophila melanogaster, GI21355075, Length=354, Percent_Identity=31.638418079096, Blast_Score=179, Evalue=2e-45, Organism=Drosophila melanogaster, GI17136814, Length=363, Percent_Identity=33.0578512396694, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI281365720, Length=317, Percent_Identity=34.0694006309148, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI17647335, Length=370, Percent_Identity=31.0810810810811, Blast_Score=176, Evalue=3e-44, Organism=Drosophila melanogaster, GI24584994, Length=400, Percent_Identity=29.75, Blast_Score=168, Evalue=8e-42, Organism=Drosophila melanogaster, GI28571808, Length=353, Percent_Identity=30.5949008498584, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI28571809, Length=353, Percent_Identity=30.5949008498584, Blast_Score=160, Evalue=1e-39, Organism=Drosophila melanogaster, GI21355559, Length=378, Percent_Identity=30.4232804232804, Blast_Score=154, Evalue=1e-37, Organism=Drosophila melanogaster, GI24666101, Length=360, Percent_Identity=29.4444444444444, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI24642822, Length=374, Percent_Identity=28.0748663101604, Blast_Score=153, Evalue=3e-37, Organism=Drosophila melanogaster, GI24643725, Length=378, Percent_Identity=26.7195767195767, Blast_Score=151, Evalue=8e-37, Organism=Drosophila melanogaster, GI24668515, Length=330, Percent_Identity=30.9090909090909, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI19920478, Length=355, Percent_Identity=26.4788732394366, Blast_Score=115, Evalue=7e-26, Organism=Drosophila melanogaster, GI17136666, Length=420, Percent_Identity=26.1904761904762, Blast_Score=112, Evalue=4e-25, Organism=Drosophila melanogaster, GI20130173, Length=433, Percent_Identity=23.5565819861432, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI18859659, Length=198, Percent_Identity=31.8181818181818, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI28571338, Length=198, Percent_Identity=31.8181818181818, Blast_Score=87, Evalue=3e-17, Organism=Drosophila melanogaster, GI24640164, Length=354, Percent_Identity=22.0338983050847, Blast_Score=78, Evalue=1e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 50748; Mature: 50617
Theoretical pI: Translated: 10.23; Mature: 10.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFTKFQFKNYIREALEELKFTTPTEVQDKLIPIVLAGRDLVGESKTGSGKTHTFLLPIF CCCHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEEECCCCCCCCCCCCCCCEEEHHHHH QQLDEASDSVQAVITAPSRELATQIYQVARQISAHSDVEVRVVNYVGGTDKARQIEKLAS HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHC NQPHIVIGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLDMGFLETVDKIAGSLPKDLQF CCCEEEEECCHHHHHHHHCCCEEEEEEEEEEEECCCCEECHHHHHHHHHHHCCCCCCCEE MVFSATIPQKLQPFLKKYLSNPVMEKIKTKTVISDTIDNWLISTKGHDKNAQIYQLTQLM EEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHH QPYLAMIFVNTKTRADELHSYLTAQGLKVAKIHGDIAPRERKRIMNQVQNLDFEYIVATD HHHHHHHEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEH LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGTAITLYQPSDDSDIRELEKL HHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHC GIKFSPKMVKDGEFQDTYDRDRRANREKKQDKLDIEMIGLVKKKKKKVKPGYKKKIQWAV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH DEKRRKTKRAENRARGRAERKAKRQTF HHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SFTKFQFKNYIREALEELKFTTPTEVQDKLIPIVLAGRDLVGESKTGSGKTHTFLLPIF CCHHHHHHHHHHHHHHHCCCCCCCHHHHCEEEEEEECCCCCCCCCCCCCCCEEEHHHHH QQLDEASDSVQAVITAPSRELATQIYQVARQISAHSDVEVRVVNYVGGTDKARQIEKLAS HHHHHCCCCEEEEEECCCHHHHHHHHHHHHHHHCCCCCEEEEEEECCCCHHHHHHHHHHC NQPHIVIGTPGRIYDLVKSGDLAIHKAKTFVVDEADMTLDMGFLETVDKIAGSLPKDLQF CCCEEEEECCHHHHHHHHCCCEEEEEEEEEEEECCCCEECHHHHHHHHHHHCCCCCCCEE MVFSATIPQKLQPFLKKYLSNPVMEKIKTKTVISDTIDNWLISTKGHDKNAQIYQLTQLM EEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCEEECCCCCCCCHHHHHHHHH QPYLAMIFVNTKTRADELHSYLTAQGLKVAKIHGDIAPRERKRIMNQVQNLDFEYIVATD HHHHHHHEECCCCCHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHCCCCEEEEEEH LAARGIDIEGVSHVINDAIPQDLSFFVHRVGRTGRNGLPGTAITLYQPSDDSDIRELEKL HHHCCCCHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCEEEEECCCCCHHHHHHHHC GIKFSPKMVKDGEFQDTYDRDRRANREKKQDKLDIEMIGLVKKKKKKVKPGYKKKIQWAV CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHH DEKRRKTKRAENRARGRAERKAKRQTF HHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]