| Definition | Streptococcus pneumoniae Hungary19A-6, complete genome. |
|---|---|
| Accession | NC_010380 |
| Length | 2,245,615 |
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The map label for this gene is spxB
Identifier: 169832534
GI number: 169832534
Start: 762998
End: 764773
Strand: Direct
Name: spxB
Synonym: SPH_0817
Alternate gene names: 169832534
Gene position: 762998-764773 (Clockwise)
Preceding gene: 169833161
Following gene: 169832531
Centisome position: 33.98
GC content: 43.13
Gene sequence:
>1776_bases ATGACTCAAGGGAAAATTACTGCATCTGCAGCAATGCTTAACGTATTGAAAACATGGGGCGTAGATACAATCTACGGTAT CCCATCAGGAACACTCAGCTCATTGATGGACGCTTTGGCTGAAGACAAAGATATCCGCTTCTTACAAGTTCGCCACGAAG AGACAGGTGCTCTTGCAGCGGTTATGCAAGCTAAATTCGGCGGCTCAATCGGGGTTGCAGTTGGTTCAGGTGGTCCAGGT GCGACTCACTTGATTAACGGTGTTTACGATGCAGCTATGGATAACACTCCATTCCTAGCGATCCTTGGATCACGTCCAGT TAACGAATTGAACATGGATGCTTTCCAAGAGCTTAACCAAAACCCAATGTACAACGGTATCGCTGTTTACAACAAACGTG TAGCTTACGCTGAGCAATTGCCAAAAGTAATTGACGAAGCCTGCCGTGCTGCAGTTTCTAAAAAAGGTCCAGCTGTTGTT GAAATTCCAGTAAACTTCGGTTTCCAAGAAATCGACGAAAACTCATACTACGGTTCAGGTTCATACGAACGCTCATTCAT CGCTCCTGCTTTGAACGAAGTTGAAATCGACAAAGCTGTTGAAATCTTGAACAATGCTGAACGCCCAGTTATCTATGCTG GATTTGGTGGTGTTAAAGCTGGTGAAGTGATTACTGAATTGTCACGTAAAATCAAAGCACCAATCATCACAACTGGTAAA AACTTTGAAGCTTTCGAATGGAACTATGAAGGTTTGACAGGTTCTGCTTACCGTGTTGGTTGGAAACCAGCCAACGAAGT GGTCTTTGAAGCAGACACAGTTCTTTTCCTTGGTTCAAACTTCCCATTTGCTGAAGTTTACGAAGCATTCAAGAACACTG AAAAATTCATCCAAGTCGATATCGACCCTTACAAACTTGGTAAACGTCATGCCCTTGACGCTTCAATCCTTGGTGATGCT GGTCAAGCAGCTAAAGCTATCCTTGACAAAGTAAACCCAGTTGAATCAACTCCATGGTGGCGTGCAAACGTTAAGAACAA CCAAAACTGGCGTGATTACATGAACAAACTCGAAGGTAAAACTGAGGGTGAATTGCAATTGTATCAAGTTTACAATGCAA TCAACAAACATGCTGATCAAGACGCTATCTACTCAATCGACGTAGGTAACACTACTCAAACATCTACTCGTCACCTTCAC ATGACACCTAAGAACATGTGGCGTACATCTCCACTCTTTGCGACAATGGGTATTGCCCTTCCTGGTGGTATCGCTGCTAA GAAAGACAATCCAGATCGCCAAGTATGGAACATCATGGGTGACGGAGCATTCAACATGTGCTACCCAGACGTTATCACAA ACGTTCAATACGACCTTCCAGTTATCAACCTTGTCTTCTCAAATGCTGAGTACGGCTTCATCAAGAACAAATACGAAGAT ACAAACAAACACTTGTTTGGTGTAGATTTCACAAACGCTGACTACGCTAAAATTGCGGAAGCTCAAGGAGCTGTTGGATT CACAGTTGACCGTATCGAAGACATCGATGCAGTTGTTGCAGAAGCTGTTAAATTGAACAAAGAAGGTAAAACTGTTGTCA TCGATGCTCGCATCACTCAACACCGTCCACTTCCAGTAGAAGTACTTGAATTGGATCCAAAACTTCACTCAGAAGAAGCT ATCAAAGCCTTCAAGGAAAAATACGAAGCAGAAGAACTCGTACCATTCCGTCTCTTCTTGGAAGAAGAAGGATTGCAATC ACGCGCAATTAAATAA
Upstream 100 bases:
>100_bases ATAAATATGATACAGTGGAATAGTAAAAATTTGGAGAACGTTTCCAATTCTATGTAATCGTATTCTCCAAGTTTAAAAAA ATTGAAGGAGAGTTATCATT
Downstream 100 bases:
>100_bases TTCCTCTCGCCGAAAATCAAATATGAAACTTGTAGACTTTATTCTTTGATTTTCATAGAGCAGAACTTTAAAAGATCGGA GCAATCCGGTCTTTTTATGG
Product: pyruvate oxidase
Products: NA
Alternate protein names: Pyruvic oxidase; POX
Number of amino acids: Translated: 591; Mature: 590
Protein sequence:
>591_residues MTQGKITASAAMLNVLKTWGVDTIYGIPSGTLSSLMDALAEDKDIRFLQVRHEETGALAAVMQAKFGGSIGVAVGSGGPG ATHLINGVYDAAMDNTPFLAILGSRPVNELNMDAFQELNQNPMYNGIAVYNKRVAYAEQLPKVIDEACRAAVSKKGPAVV EIPVNFGFQEIDENSYYGSGSYERSFIAPALNEVEIDKAVEILNNAERPVIYAGFGGVKAGEVITELSRKIKAPIITTGK NFEAFEWNYEGLTGSAYRVGWKPANEVVFEADTVLFLGSNFPFAEVYEAFKNTEKFIQVDIDPYKLGKRHALDASILGDA GQAAKAILDKVNPVESTPWWRANVKNNQNWRDYMNKLEGKTEGELQLYQVYNAINKHADQDAIYSIDVGNTTQTSTRHLH MTPKNMWRTSPLFATMGIALPGGIAAKKDNPDRQVWNIMGDGAFNMCYPDVITNVQYDLPVINLVFSNAEYGFIKNKYED TNKHLFGVDFTNADYAKIAEAQGAVGFTVDRIEDIDAVVAEAVKLNKEGKTVVIDARITQHRPLPVEVLELDPKLHSEEA IKAFKEKYEAEELVPFRLFLEEEGLQSRAIK
Sequences:
>Translated_591_residues MTQGKITASAAMLNVLKTWGVDTIYGIPSGTLSSLMDALAEDKDIRFLQVRHEETGALAAVMQAKFGGSIGVAVGSGGPG ATHLINGVYDAAMDNTPFLAILGSRPVNELNMDAFQELNQNPMYNGIAVYNKRVAYAEQLPKVIDEACRAAVSKKGPAVV EIPVNFGFQEIDENSYYGSGSYERSFIAPALNEVEIDKAVEILNNAERPVIYAGFGGVKAGEVITELSRKIKAPIITTGK NFEAFEWNYEGLTGSAYRVGWKPANEVVFEADTVLFLGSNFPFAEVYEAFKNTEKFIQVDIDPYKLGKRHALDASILGDA GQAAKAILDKVNPVESTPWWRANVKNNQNWRDYMNKLEGKTEGELQLYQVYNAINKHADQDAIYSIDVGNTTQTSTRHLH MTPKNMWRTSPLFATMGIALPGGIAAKKDNPDRQVWNIMGDGAFNMCYPDVITNVQYDLPVINLVFSNAEYGFIKNKYED TNKHLFGVDFTNADYAKIAEAQGAVGFTVDRIEDIDAVVAEAVKLNKEGKTVVIDARITQHRPLPVEVLELDPKLHSEEA IKAFKEKYEAEELVPFRLFLEEEGLQSRAIK >Mature_590_residues TQGKITASAAMLNVLKTWGVDTIYGIPSGTLSSLMDALAEDKDIRFLQVRHEETGALAAVMQAKFGGSIGVAVGSGGPGA THLINGVYDAAMDNTPFLAILGSRPVNELNMDAFQELNQNPMYNGIAVYNKRVAYAEQLPKVIDEACRAAVSKKGPAVVE IPVNFGFQEIDENSYYGSGSYERSFIAPALNEVEIDKAVEILNNAERPVIYAGFGGVKAGEVITELSRKIKAPIITTGKN FEAFEWNYEGLTGSAYRVGWKPANEVVFEADTVLFLGSNFPFAEVYEAFKNTEKFIQVDIDPYKLGKRHALDASILGDAG QAAKAILDKVNPVESTPWWRANVKNNQNWRDYMNKLEGKTEGELQLYQVYNAINKHADQDAIYSIDVGNTTQTSTRHLHM TPKNMWRTSPLFATMGIALPGGIAAKKDNPDRQVWNIMGDGAFNMCYPDVITNVQYDLPVINLVFSNAEYGFIKNKYEDT NKHLFGVDFTNADYAKIAEAQGAVGFTVDRIEDIDAVVAEAVKLNKEGKTVVIDARITQHRPLPVEVLELDPKLHSEEAI KAFKEKYEAEELVPFRLFLEEEGLQSRAIK
Specific function: Important for the aerobic growth. Decarboxylates pyruvate in four steps. The energy released is partially stored in acetyl phosphate
COG id: COG0028
COG function: function code EH; Thiamine pyrophosphate-requiring enzymes [acetolactate synthase, pyruvate dehydrogenase (cytochrome), glyoxylate carboligase, phosphonopyruvate decarboxylase]
Gene ontology:
Cell location: Membrane-Associated [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TPP enzyme family
Homologues:
Organism=Homo sapiens, GI93004078, Length=550, Percent_Identity=24, Blast_Score=137, Evalue=3e-32, Organism=Homo sapiens, GI21361361, Length=569, Percent_Identity=23.3743409490334, Blast_Score=121, Evalue=2e-27, Organism=Escherichia coli, GI1787096, Length=557, Percent_Identity=28.7253141831239, Blast_Score=237, Evalue=2e-63, Organism=Escherichia coli, GI1790104, Length=552, Percent_Identity=28.804347826087, Blast_Score=189, Evalue=4e-49, Organism=Escherichia coli, GI1786717, Length=561, Percent_Identity=25.1336898395722, Blast_Score=175, Evalue=9e-45, Organism=Escherichia coli, GI87081685, Length=537, Percent_Identity=25.3258845437616, Blast_Score=174, Evalue=1e-44, Organism=Escherichia coli, GI1788716, Length=551, Percent_Identity=23.5934664246824, Blast_Score=91, Evalue=2e-19, Organism=Caenorhabditis elegans, GI17531299, Length=563, Percent_Identity=23.4458259325044, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17531301, Length=563, Percent_Identity=23.4458259325044, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI17542570, Length=566, Percent_Identity=23.321554770318, Blast_Score=117, Evalue=2e-26, Organism=Saccharomyces cerevisiae, GI6323755, Length=591, Percent_Identity=24.5346869712352, Blast_Score=165, Evalue=2e-41, Organism=Saccharomyces cerevisiae, GI6320816, Length=560, Percent_Identity=24.4642857142857, Blast_Score=110, Evalue=5e-25, Organism=Drosophila melanogaster, GI19922626, Length=552, Percent_Identity=24.2753623188406, Blast_Score=122, Evalue=1e-27,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): POXB_STRPN (Q54970)
Other databases:
- EMBL: L39074 - EMBL: AE005672 - PIR: F95084 - RefSeq: NP_345231.1 - ProteinModelPortal: Q54970 - SMR: Q54970 - EnsemblBacteria: EBSTRT00000025515 - GeneID: 930680 - GenomeReviews: AE005672_GR - KEGG: spn:SP_0730 - TIGR: SP_0730 - GeneTree: EBGT00050000027772 - HOGENOM: HBG323037 - OMA: WYASANS - ProtClustDB: CLSK883986 - BioCyc: SPNE170187-1:SP_0730-MONOMER - BRENDA: 1.2.3.3 - InterPro: IPR014092 - InterPro: IPR012000 - InterPro: IPR012001 - InterPro: IPR000399 - InterPro: IPR011766 - TIGRFAMs: TIGR02720
Pfam domain/function: PF02775 TPP_enzyme_C; PF00205 TPP_enzyme_M; PF02776 TPP_enzyme_N
EC number: =1.2.3.3
Molecular weight: Translated: 65267; Mature: 65135
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: PS00187 TPP_ENZYMES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQGKITASAAMLNVLKTWGVDTIYGIPSGTLSSLMDALAEDKDIRFLQVRHEETGALAA CCCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH VMQAKFGGSIGVAVGSGGPGATHLINGVYDAAMDNTPFLAILGSRPVNELNMDAFQELNQ HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCC NPMYNGIAVYNKRVAYAEQLPKVIDEACRAAVSKKGPAVVEIPVNFGFQEIDENSYYGSG CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCC SYERSFIAPALNEVEIDKAVEILNNAERPVIYAGFGGVKAGEVITELSRKIKAPIITTGK CCCCCHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEECCC NFEAFEWNYEGLTGSAYRVGWKPANEVVFEADTVLFLGSNFPFAEVYEAFKNTEKFIQVD CCEEEEEECCCCCCCEEEECCCCCCCEEEECCEEEEEECCCCHHHHHHHHCCCCEEEEEE IDPYKLGKRHALDASILGDAGQAAKAILDKVNPVESTPWWRANVKNNQNWRDYMNKLEGK CCHHHCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHCCC TEGELQLYQVYNAINKHADQDAIYSIDVGNTTQTSTRHLHMTPKNMWRTSPLFATMGIAL CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECHHHHCCCCCHHHHHCEEC PGGIAAKKDNPDRQVWNIMGDGAFNMCYPDVITNVQYDLPVINLVFSNAEYGFIKNKYED CCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCEECCCCCC TNKHLFGVDFTNADYAKIAEAQGAVGFTVDRIEDIDAVVAEAVKLNKEGKTVVIDARITQ CCCEEEEEECCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECC HRPLPVEVLELDPKLHSEEAIKAFKEKYEAEELVPFRLFLEEEGLQSRAIK CCCCCEEEEECCCCCCHHHHHHHHHHHHCHHHCCEEEEEEECCCCHHCCCC >Mature Secondary Structure TQGKITASAAMLNVLKTWGVDTIYGIPSGTLSSLMDALAEDKDIRFLQVRHEETGALAA CCCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHHHCCCCEEEEEEECCCCHHHHH VMQAKFGGSIGVAVGSGGPGATHLINGVYDAAMDNTPFLAILGSRPVNELNMDAFQELNQ HHHHHCCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHCCC NPMYNGIAVYNKRVAYAEQLPKVIDEACRAAVSKKGPAVVEIPVNFGFQEIDENSYYGSG CCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCHHHHCCCCCCCCC SYERSFIAPALNEVEIDKAVEILNNAERPVIYAGFGGVKAGEVITELSRKIKAPIITTGK CCCCCHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCHHHHHHHHHHHHCCCEEECCC NFEAFEWNYEGLTGSAYRVGWKPANEVVFEADTVLFLGSNFPFAEVYEAFKNTEKFIQVD CCEEEEEECCCCCCCEEEECCCCCCCEEEECCEEEEEECCCCHHHHHHHHCCCCEEEEEE IDPYKLGKRHALDASILGDAGQAAKAILDKVNPVESTPWWRANVKNNQNWRDYMNKLEGK CCHHHCCCCCCCCHHHHCCCHHHHHHHHHCCCCCCCCCCEEECCCCCCCHHHHHHHHCCC TEGELQLYQVYNAINKHADQDAIYSIDVGNTTQTSTRHLHMTPKNMWRTSPLFATMGIAL CCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCEEEEECHHHHCCCCCHHHHHCEEC PGGIAAKKDNPDRQVWNIMGDGAFNMCYPDVITNVQYDLPVINLVFSNAEYGFIKNKYED CCCCCCCCCCCCHHHHHHHCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCEECCCCCC TNKHLFGVDFTNADYAKIAEAQGAVGFTVDRIEDIDAVVAEAVKLNKEGKTVVIDARITQ CCCEEEEEECCCCCHHHHHHHCCCCCEEHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECC HRPLPVEVLELDPKLHSEEAIKAFKEKYEAEELVPFRLFLEEEGLQSRAIK CCCCCEEEEECCCCCCHHHHHHHHHHHHCHHHCCEEEEEEECCCCHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8820650; 11463916