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The map label for this gene is hsdS [C]

Identifier: 169825230

GI number: 169825230

Start: 1695513

End: 1696745

Strand: Direct

Name: hsdS [C]

Synonym: FMG_1533

Alternate gene names: 169825230

Gene position: 1695513-1696745 (Clockwise)

Preceding gene: 169825229

Following gene: 169825231

Centisome position: 94.32

GC content: 30.66

Gene sequence:

>1233_bases
ATGGAAAGAAGAGAAGTAAAATTAGGAGATATTATTACTTATAACAAAGGATACGCTTTTAAAAGTAATGAATATACCAA
CACTGGCAAAATGGTTGTTAGGGTAACTGATTTCACGTTAGATTCTATTAGCGATAATGATTCTGTATATTTAGAACCAA
ATGATAAATATAAAAAATTTATAATTAATACCAACGATATATTAATTCAGACAGTAGGATCATGGGCGAATAATCCAAAT
TCCATTGTTGGAAAAGTAGTAAGAGTCCCTGACAAATGTAATAAGGCATATCTTAATCAAAATATTGTTCGTATTATTCC
TAATAGAGATTTTAATAACACATACTTATACTATGCTCTTAAGGCAAATCAATTTTCTACGTATTGTGTTTTACGAGGGC
AAGGTGCAGCTAATCAAGCAAGTATTACATTAGACACTATCTTTAAATTTAAGTTTAGAGCACATTTATTATCTGAACAA
AAGAGGATTGCAGATATTCTTTCATCCTATGATAACCTCATCGAAAACAACAACAAGCGAATCAAACTTTTAGAGCAAAT
GGCTGAAAATCTCTATAAGGAATGGTTTGTAAGATTTCGCTTTCCGGGATATGAGGATGTGGAATTTGAGAACGGAATAC
CTAAGGGTTGGGAAGAAGTTAGACTAGGTGAGTTTATAAATTTGGCATCCGGATATGCATTCAAAAGTGATTGGTGGACT
GACCAAGGCGTTCCAGTTATTAAAATTAAAGATATACAAAATGGAAAAATAGATTTAACGAATCTGGATTATGTATCTGA
AGATAACGCTCAAAAGGCAAAAAATTTTTATGTTGGTAAAGGAGATATCCTTATTGCTCTTACAGGTGCAACTATTGGAA
AAGTTGGAATTGTGACACATGACAATGTACTTGTTAACCAACGTGTTGGTAAATTTTTTATAAAGAAACCTTCAATAAAG
AATATTGGATATATATATAGTTTATTTAAACAGAATTGGATACAAGAACTAATAGTTATGTATTCTGGTAGTAATGCAGC
TCAACCTAATATTAGCCCGTTTGATATTGAAAAATTTAAAATTATTTATAATAAGGTGTACGTTGATAAATTTAATGTAA
TAGTGTATCCGATTTATGATAGCATAATAAAACTTTATGAGAAAAATGAACTCTTAGAAAAGCAACGAGATTTACTTCTC
CCCCGCCTAATGAGTGGGAAATTAGAAGTGTAA

Upstream 100 bases:

>100_bases
ATGTATTCTTTAAATGCTGAGTTTGCTGCATTAAGTGCTGAGGCAAAGACACTTGAAGAATTAATCTCGAATAATCTGAA
AGAATTGTTGGGTGAGTGAT

Downstream 100 bases:

>100_bases
GGAGGTGTTTATATGCGTAATTTTATATCAGAAGACGATATTGAACAGGCTATACTTTCAAAGTTAAAAGCTGAACCATT
TGAATATGACATCCTCATTT

Product: putative type I restriction enzyme S protein

Products: NA

Alternate protein names: S.MjaXP; Type I restriction enzyme MjaXP specificity protein; S protein [H]

Number of amino acids: Translated: 410; Mature: 410

Protein sequence:

>410_residues
MERREVKLGDIITYNKGYAFKSNEYTNTGKMVVRVTDFTLDSISDNDSVYLEPNDKYKKFIINTNDILIQTVGSWANNPN
SIVGKVVRVPDKCNKAYLNQNIVRIIPNRDFNNTYLYYALKANQFSTYCVLRGQGAANQASITLDTIFKFKFRAHLLSEQ
KRIADILSSYDNLIENNNKRIKLLEQMAENLYKEWFVRFRFPGYEDVEFENGIPKGWEEVRLGEFINLASGYAFKSDWWT
DQGVPVIKIKDIQNGKIDLTNLDYVSEDNAQKAKNFYVGKGDILIALTGATIGKVGIVTHDNVLVNQRVGKFFIKKPSIK
NIGYIYSLFKQNWIQELIVMYSGSNAAQPNISPFDIEKFKIIYNKVYVDKFNVIVYPIYDSIIKLYEKNELLEKQRDLLL
PRLMSGKLEV

Sequences:

>Translated_410_residues
MERREVKLGDIITYNKGYAFKSNEYTNTGKMVVRVTDFTLDSISDNDSVYLEPNDKYKKFIINTNDILIQTVGSWANNPN
SIVGKVVRVPDKCNKAYLNQNIVRIIPNRDFNNTYLYYALKANQFSTYCVLRGQGAANQASITLDTIFKFKFRAHLLSEQ
KRIADILSSYDNLIENNNKRIKLLEQMAENLYKEWFVRFRFPGYEDVEFENGIPKGWEEVRLGEFINLASGYAFKSDWWT
DQGVPVIKIKDIQNGKIDLTNLDYVSEDNAQKAKNFYVGKGDILIALTGATIGKVGIVTHDNVLVNQRVGKFFIKKPSIK
NIGYIYSLFKQNWIQELIVMYSGSNAAQPNISPFDIEKFKIIYNKVYVDKFNVIVYPIYDSIIKLYEKNELLEKQRDLLL
PRLMSGKLEV
>Mature_410_residues
MERREVKLGDIITYNKGYAFKSNEYTNTGKMVVRVTDFTLDSISDNDSVYLEPNDKYKKFIINTNDILIQTVGSWANNPN
SIVGKVVRVPDKCNKAYLNQNIVRIIPNRDFNNTYLYYALKANQFSTYCVLRGQGAANQASITLDTIFKFKFRAHLLSEQ
KRIADILSSYDNLIENNNKRIKLLEQMAENLYKEWFVRFRFPGYEDVEFENGIPKGWEEVRLGEFINLASGYAFKSDWWT
DQGVPVIKIKDIQNGKIDLTNLDYVSEDNAQKAKNFYVGKGDILIALTGATIGKVGIVTHDNVLVNQRVGKFFIKKPSIK
NIGYIYSLFKQNWIQELIVMYSGSNAAQPNISPFDIEKFKIIYNKVYVDKFNVIVYPIYDSIIKLYEKNELLEKQRDLLL
PRLMSGKLEV

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of bipartite DNA recognition sequence. Subunit S dictates DNA sequences specificity [H]

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 47375; Mature: 47375

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERREVKLGDIITYNKGYAFKSNEYTNTGKMVVRVTDFTLDSISDNDSVYLEPNDKYKKF
CCCCEEEECCEEEECCCEEECCCCCCCCCEEEEEEEEEEEECCCCCCEEEECCCCCEEEE
IINTNDILIQTVGSWANNPNSIVGKVVRVPDKCNKAYLNQNIVRIIPNRDFNNTYLYYAL
EECCCCEEEEEECCCCCCCHHHHHHEEECCCHHHHHHHCCCEEEEECCCCCCCEEEEEEE
KANQFSTYCVLRGQGAANQASITLDTIFKFKFRAHLLSEQKRIADILSSYDNLIENNNKR
ECCCCEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
IKLLEQMAENLYKEWFVRFRFPGYEDVEFENGIPKGWEEVRLGEFINLASGYAFKSDWWT
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCC
DQGVPVIKIKDIQNGKIDLTNLDYVSEDNAQKAKNFYVGKGDILIALTGATIGKVGIVTH
CCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHCEEECCCCEEEEEECCCCCEEEEEEE
DNVLVNQRVGKFFIKKPSIKNIGYIYSLFKQNWIQELIVMYSGSNAAQPNISPFDIEKFK
CCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHEE
IIYNKVYVDKFNVIVYPIYDSIIKLYEKNELLEKQRDLLLPRLMSGKLEV
EEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MERREVKLGDIITYNKGYAFKSNEYTNTGKMVVRVTDFTLDSISDNDSVYLEPNDKYKKF
CCCCEEEECCEEEECCCEEECCCCCCCCCEEEEEEEEEEEECCCCCCEEEECCCCCEEEE
IINTNDILIQTVGSWANNPNSIVGKVVRVPDKCNKAYLNQNIVRIIPNRDFNNTYLYYAL
EECCCCEEEEEECCCCCCCHHHHHHEEECCCHHHHHHHCCCEEEEECCCCCCCEEEEEEE
KANQFSTYCVLRGQGAANQASITLDTIFKFKFRAHLLSEQKRIADILSSYDNLIENNNKR
ECCCCEEEEEEECCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH
IKLLEQMAENLYKEWFVRFRFPGYEDVEFENGIPKGWEEVRLGEFINLASGYAFKSDWWT
HHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCC
DQGVPVIKIKDIQNGKIDLTNLDYVSEDNAQKAKNFYVGKGDILIALTGATIGKVGIVTH
CCCEEEEEEEECCCCEEEEEECCCCCCCCHHHHHCEEECCCCEEEEEECCCCCEEEEEEE
DNVLVNQRVGKFFIKKPSIKNIGYIYSLFKQNWIQELIVMYSGSNAAQPNISPFDIEKFK
CCEEEECCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCHHEE
IIYNKVYVDKFNVIVYPIYDSIIKLYEKNELLEKQRDLLLPRLMSGKLEV
EEEEEEEEEEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: Hydrolase; Acting on ester bonds [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]