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The map label for this gene is yoaA [C]

Identifier: 169824991

GI number: 169824991

Start: 1405635

End: 1407881

Strand: Direct

Name: yoaA [C]

Synonym: FMG_1294

Alternate gene names: 169824991

Gene position: 1405635-1407881 (Clockwise)

Preceding gene: 169824990

Following gene: 169824992

Centisome position: 78.2

GC content: 34.53

Gene sequence:

>2247_bases
ATGAAAAAAGAAATCAAACTTTCTGTCAGAGATTTGGTTGAATACACTGAACGAAGTGGCGACATAGACGATAGGTTCAG
AAATGTGTTCGACAGAGCAAAAGAAGGACAGAAAATCCATAAAATGATTCAAAAAGAATACGATATTGGATTTTTGCCGG
AAGTTACTCTCAAAAACACTACCCTTTACAAATCAGTAAATTACATCGTAGAAGGAAGAGCTGACGGAATAGGAATTAAA
AACGGCAAAACTTTAATAGATGAAATAAAATCTACTACGCGTGATTTGGAAGAATTGGAATACAATTCCAACAAATATCA
CTGGGCACAAGTAAAATGCTACGGGTATTTTTATACTTTGGACAACGACTTGGAAGATATTGATTTGCAACTTACTTATT
ATCAAACTGATACCAAGAAAATAAAATTTATCAGGCAAAATTTTACTTTTGAAGAATTAAAAGAATTTTATTTTTCGTTG
TTAGAAAAATATTCCGTGTTCACAGAATTAATCACACAGCACATAAAGAAGCGTGACGAATCCATTCAGAACTTGTCATT
TCCCTATCCTGCATTTAGAGCTGGTCAGAAGTATTTAAGCCAAAACGTTTATTCTGCAACCAAACAGGGTGTGGATTTGA
TGGTGGAAGCTGCAACAGGAATTGGCAAGACTATCTCCACGCTTTTTCCTTCAATTAAAGCTATGGGAGAAGATTTGACG
GACAAGATTTTTTATTTGACTGCAAAGTCTACTCTTAAAAAAGCCTGCAACGACCAATTGTATTTGATGAAACAAAAAGG
TTTGATAATAAAATCAGTCGAGATAATCGCAAAGAACAAGGTCTGTATCAATAATGAAGTTAAATGCAATCCGAATGATT
GCGAATTTGCAAAAGGTCACTACGACAGGGTCAACAAATGCATTCTCGATATGCTTGAAAACGGAGATATTATCGTGGAA
GAAATCATTAAAAAATACGCATTCAAATACAGAGTGTGTCCGTTGGAGTTGGAGCTTGATTTGTCCAATTTCTGCGACAT
TGTGATTTGCGATTACAATTATGTTTTTGATCCGGTAGTTTATCTGAAAAGATTTTTCGAAGTTCCTTATTTGAGGATGT
CTCTTTTGGTTGACGAAGCGCATAACTTGGTAAGTCGAGGACGTGATATGTACTCTTATTCGTTGAGTTTCAACCAACTT
ATGGACTGTTGTGATGAGCTCGTAGATGAAAAAAAAGAACTCAAAATCAAACGCAATTTGAAAAAAATCGCCCAGCAAAT
CAAAGATGAAGCTTTGGGAAAACCTGTCAACACTTATGAGGATTTGTCGGTTGATTTGATTGATTATTGTGTTCGTTGCA
AAGAATCCATGACGAAATTCTTGGTTGAAGAAAAGGACAAGCCATACTACGACAAAGTATTGGATGTGTATTTTGAAATC
AATAAGTTTTTGAAAATTTCTGATTTTTACGATGATTCTTTCGTTACTTTGATAAAATCAGAAAACGATGATGTTATTTA
CAACATCATGTGCTTGAACACACACAATATTTTTAAAAATCTTTTGAAAAAATGCAAATCAAATGTATTTTTCTCAGCGA
CTTTGTCTCCTATGACTTACTTTGCAGATGTATTGGGTTTGGAAAAATTCTACAACATAAGATTGGAATCTCCTTTCCCA
AAAGAGAATTTGAAAGTAAATCACATCAATATTTCAACTAGATTTAAAGACCGCGAAGATACGAAATACAAAATCGCAGA
AATTCTTCGAAAAATCAACGAAAAGCCTGGAAACAAACTCATTTTCTTCCCATCTTATTCTTATTTGGAATCAGTGTATG
AGATTTGTGATTTCGATATTTTAACGCAAGAAAGAACGCTAACTGATATGGAAAGGTTGGAATTTTTGTCCCAATTTACA
ACAAGTTCAAACATAATGGCTTTTTGTGTTCTGGGTGGAGTTTTCAGTGAGGGCGTTGATTTGAGCGGCGACAGATTGAA
TACTGTAGGGATAATTTCAGTCGGACTTCCTGGAATTAGCGTAGAAAATGATTTGATTAAAAAATATTTCGACGAAAATG
GAAAAAACGGATTCGATTACGCTTACGTGTATCCAGGAATGAACAAGGTACACCAAGCTGGTGGAAGACTTATCAGAACA
GATACCGATACTGGAGAATTATTTTTGATTGACGATAGGTTTGACTCATATCCTTACAAATCGCTTCTTCCAAATAGCTG
GAAATAA

Upstream 100 bases:

>100_bases
TCGAATACGTAACAGATGAGGATAAAATGTATCGTGATTTAGCGATTGAAAGAAGAAAAATTTACAAAGAAGTAAATTTG
CTTCAACAAAATTATAAACT

Downstream 100 bases:

>100_bases
ATTTTTTGAGAAAAAAGCAATTCGATATGGTAAAATTAATTTAATCCCAATGGGAAATTTAAAAATGAAGGTGAAATTAT
GTCAGAACAAATAGAATTTA

Product: ATP dependent helicase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 748; Mature: 748

Protein sequence:

>748_residues
MKKEIKLSVRDLVEYTERSGDIDDRFRNVFDRAKEGQKIHKMIQKEYDIGFLPEVTLKNTTLYKSVNYIVEGRADGIGIK
NGKTLIDEIKSTTRDLEELEYNSNKYHWAQVKCYGYFYTLDNDLEDIDLQLTYYQTDTKKIKFIRQNFTFEELKEFYFSL
LEKYSVFTELITQHIKKRDESIQNLSFPYPAFRAGQKYLSQNVYSATKQGVDLMVEAATGIGKTISTLFPSIKAMGEDLT
DKIFYLTAKSTLKKACNDQLYLMKQKGLIIKSVEIIAKNKVCINNEVKCNPNDCEFAKGHYDRVNKCILDMLENGDIIVE
EIIKKYAFKYRVCPLELELDLSNFCDIVICDYNYVFDPVVYLKRFFEVPYLRMSLLVDEAHNLVSRGRDMYSYSLSFNQL
MDCCDELVDEKKELKIKRNLKKIAQQIKDEALGKPVNTYEDLSVDLIDYCVRCKESMTKFLVEEKDKPYYDKVLDVYFEI
NKFLKISDFYDDSFVTLIKSENDDVIYNIMCLNTHNIFKNLLKKCKSNVFFSATLSPMTYFADVLGLEKFYNIRLESPFP
KENLKVNHINISTRFKDREDTKYKIAEILRKINEKPGNKLIFFPSYSYLESVYEICDFDILTQERTLTDMERLEFLSQFT
TSSNIMAFCVLGGVFSEGVDLSGDRLNTVGIISVGLPGISVENDLIKKYFDENGKNGFDYAYVYPGMNKVHQAGGRLIRT
DTDTGELFLIDDRFDSYPYKSLLPNSWK

Sequences:

>Translated_748_residues
MKKEIKLSVRDLVEYTERSGDIDDRFRNVFDRAKEGQKIHKMIQKEYDIGFLPEVTLKNTTLYKSVNYIVEGRADGIGIK
NGKTLIDEIKSTTRDLEELEYNSNKYHWAQVKCYGYFYTLDNDLEDIDLQLTYYQTDTKKIKFIRQNFTFEELKEFYFSL
LEKYSVFTELITQHIKKRDESIQNLSFPYPAFRAGQKYLSQNVYSATKQGVDLMVEAATGIGKTISTLFPSIKAMGEDLT
DKIFYLTAKSTLKKACNDQLYLMKQKGLIIKSVEIIAKNKVCINNEVKCNPNDCEFAKGHYDRVNKCILDMLENGDIIVE
EIIKKYAFKYRVCPLELELDLSNFCDIVICDYNYVFDPVVYLKRFFEVPYLRMSLLVDEAHNLVSRGRDMYSYSLSFNQL
MDCCDELVDEKKELKIKRNLKKIAQQIKDEALGKPVNTYEDLSVDLIDYCVRCKESMTKFLVEEKDKPYYDKVLDVYFEI
NKFLKISDFYDDSFVTLIKSENDDVIYNIMCLNTHNIFKNLLKKCKSNVFFSATLSPMTYFADVLGLEKFYNIRLESPFP
KENLKVNHINISTRFKDREDTKYKIAEILRKINEKPGNKLIFFPSYSYLESVYEICDFDILTQERTLTDMERLEFLSQFT
TSSNIMAFCVLGGVFSEGVDLSGDRLNTVGIISVGLPGISVENDLIKKYFDENGKNGFDYAYVYPGMNKVHQAGGRLIRT
DTDTGELFLIDDRFDSYPYKSLLPNSWK
>Mature_748_residues
MKKEIKLSVRDLVEYTERSGDIDDRFRNVFDRAKEGQKIHKMIQKEYDIGFLPEVTLKNTTLYKSVNYIVEGRADGIGIK
NGKTLIDEIKSTTRDLEELEYNSNKYHWAQVKCYGYFYTLDNDLEDIDLQLTYYQTDTKKIKFIRQNFTFEELKEFYFSL
LEKYSVFTELITQHIKKRDESIQNLSFPYPAFRAGQKYLSQNVYSATKQGVDLMVEAATGIGKTISTLFPSIKAMGEDLT
DKIFYLTAKSTLKKACNDQLYLMKQKGLIIKSVEIIAKNKVCINNEVKCNPNDCEFAKGHYDRVNKCILDMLENGDIIVE
EIIKKYAFKYRVCPLELELDLSNFCDIVICDYNYVFDPVVYLKRFFEVPYLRMSLLVDEAHNLVSRGRDMYSYSLSFNQL
MDCCDELVDEKKELKIKRNLKKIAQQIKDEALGKPVNTYEDLSVDLIDYCVRCKESMTKFLVEEKDKPYYDKVLDVYFEI
NKFLKISDFYDDSFVTLIKSENDDVIYNIMCLNTHNIFKNLLKKCKSNVFFSATLSPMTYFADVLGLEKFYNIRLESPFP
KENLKVNHINISTRFKDREDTKYKIAEILRKINEKPGNKLIFFPSYSYLESVYEICDFDILTQERTLTDMERLEFLSQFT
TSSNIMAFCVLGGVFSEGVDLSGDRLNTVGIISVGLPGISVENDLIKKYFDENGKNGFDYAYVYPGMNKVHQAGGRLIRT
DTDTGELFLIDDRFDSYPYKSLLPNSWK

Specific function: Unknown

COG id: COG1199

COG function: function code KL; Rad3-related DNA helicases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 helicase C-terminal domain [H]

Homologues:

Organism=Drosophila melanogaster, GI45551134, Length=306, Percent_Identity=25.1633986928105, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI281363902, Length=306, Percent_Identity=25.1633986928105, Blast_Score=70, Evalue=4e-12,
Organism=Drosophila melanogaster, GI17137232, Length=306, Percent_Identity=25.1633986928105, Blast_Score=70, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010614
- InterPro:   IPR014013
- InterPro:   IPR006555
- InterPro:   IPR001650 [H]

Pfam domain/function: PF06733 DEAD_2 [H]

EC number: =3.6.4.12 [H]

Molecular weight: Translated: 87202; Mature: 87202

Theoretical pI: Translated: 5.48; Mature: 5.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKEIKLSVRDLVEYTERSGDIDDRFRNVFDRAKEGQKIHKMIQKEYDIGFLPEVTLKNT
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEECCC
TLYKSVNYIVEGRADGIGIKNGKTLIDEIKSTTRDLEELEYNSNKYHWAQVKCYGYFYTL
HHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEE
DNDLEDIDLQLTYYQTDTKKIKFIRQNFTFEELKEFYFSLLEKYSVFTELITQHIKKRDE
CCCCCCEEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIQNLSFPYPAFRAGQKYLSQNVYSATKQGVDLMVEAATGIGKTISTLFPSIKAMGEDLT
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHCCCHHHHHHHHHHHHHCCCCC
DKIFYLTAKSTLKKACNDQLYLMKQKGLIIKSVEIIAKNKVCINNEVKCNPNDCEFAKGH
CCEEEEEHHHHHHHHCCCCEEEEECCCCEEEEEHHHCCCCEEECCCEECCCCCCCCCCCH
YDRVNKCILDMLENGDIIVEEIIKKYAFKYRVCPLELELDLSNFCDIVICDYNYVFDPVV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCEEEEECCCCCCCEEEECCCHHHHHHH
YLKRFFEVPYLRMSLLVDEAHNLVSRGRDMYSYSLSFNQLMDCCDELVDEKKELKIKRNL
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHH
KKIAQQIKDEALGKPVNTYEDLSVDLIDYCVRCKESMTKFLVEEKDKPYYDKVLDVYFEI
HHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
NKFLKISDFYDDSFVTLIKSENDDVIYNIMCLNTHNIFKNLLKKCKSNVFFSATLSPMTY
HHHEEEECCCCCCEEEEEECCCCCEEEEEEEECHHHHHHHHHHHHHCCEEEEEECCHHHH
FADVLGLEKFYNIRLESPFPKENLKVNHINISTRFKDREDTKYKIAEILRKINEKPGNKL
HHHHHHHHHHHEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEE
IFFPSYSYLESVYEICDFDILTQERTLTDMERLEFLSQFTTSSNIMAFCVLGGVFSEGVD
EEECCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
LSGDRLNTVGIISVGLPGISVENDLIKKYFDENGKNGFDYAYVYPGMNKVHQAGGRLIRT
CCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHCCCEEEEE
DTDTGELFLIDDRFDSYPYKSLLPNSWK
CCCCCCEEEEECCCCCCCCHHCCCCCCC
>Mature Secondary Structure
MKKEIKLSVRDLVEYTERSGDIDDRFRNVFDRAKEGQKIHKMIQKEYDIGFLPEVTLKNT
CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCEECCC
TLYKSVNYIVEGRADGIGIKNGKTLIDEIKSTTRDLEELEYNSNKYHWAQVKCYGYFYTL
HHHHHHHHEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEEEEEEEEE
DNDLEDIDLQLTYYQTDTKKIKFIRQNFTFEELKEFYFSLLEKYSVFTELITQHIKKRDE
CCCCCCEEEEEEEEECCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SIQNLSFPYPAFRAGQKYLSQNVYSATKQGVDLMVEAATGIGKTISTLFPSIKAMGEDLT
HHHHCCCCCHHHHHHHHHHHHHHHHHHHCCHHEEEEHHHCCCHHHHHHHHHHHHHCCCCC
DKIFYLTAKSTLKKACNDQLYLMKQKGLIIKSVEIIAKNKVCINNEVKCNPNDCEFAKGH
CCEEEEEHHHHHHHHCCCCEEEEECCCCEEEEEHHHCCCCEEECCCEECCCCCCCCCCCH
YDRVNKCILDMLENGDIIVEEIIKKYAFKYRVCPLELELDLSNFCDIVICDYNYVFDPVV
HHHHHHHHHHHHHCCCCHHHHHHHHHHHHEEECCEEEEECCCCCCCEEEECCCHHHHHHH
YLKRFFEVPYLRMSLLVDEAHNLVSRGRDMYSYSLSFNQLMDCCDELVDEKKELKIKRNL
HHHHHHHCCHHHHHHHHHHHHHHHHCCCCCEEEECCHHHHHHHHHHHHCCHHHHHHHHHH
KKIAQQIKDEALGKPVNTYEDLSVDLIDYCVRCKESMTKFLVEEKDKPYYDKVLDVYFEI
HHHHHHHHHHHCCCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
NKFLKISDFYDDSFVTLIKSENDDVIYNIMCLNTHNIFKNLLKKCKSNVFFSATLSPMTY
HHHEEEECCCCCCEEEEEECCCCCEEEEEEEECHHHHHHHHHHHHHCCEEEEEECCHHHH
FADVLGLEKFYNIRLESPFPKENLKVNHINISTRFKDREDTKYKIAEILRKINEKPGNKL
HHHHHHHHHHHEEEECCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCEE
IFFPSYSYLESVYEICDFDILTQERTLTDMERLEFLSQFTTSSNIMAFCVLGGVFSEGVD
EEECCHHHHHHHHHHHCCHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCC
LSGDRLNTVGIISVGLPGISVENDLIKKYFDENGKNGFDYAYVYPGMNKVHQAGGRLIRT
CCCCCCCEEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCEEEECCCHHHHHHCCCEEEEE
DTDTGELFLIDDRFDSYPYKSLLPNSWK
CCCCCCEEEEECCCCCCCCHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 11029001 [H]