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The map label for this gene is ydhO [H]

Identifier: 169824407

GI number: 169824407

Start: 773865

End: 775634

Strand: Direct

Name: ydhO [H]

Synonym: FMG_0710

Alternate gene names: 169824407

Gene position: 773865-775634 (Clockwise)

Preceding gene: 169824406

Following gene: 169824408

Centisome position: 43.05

GC content: 29.15

Gene sequence:

>1770_bases
ATGAATAAAAAAGGACTTGGCTTATCTATAGGATTGGCTTCAGTTATAGCTGTAGGAACTTTTGTATCGCCTTATTTAAG
TTCTACAACTTTAATAGGAGACAATAGTATTGAATCAAATCAATCACTTGATTCAAAATATTCAGTTGCAGTAAAAAACG
ACTCGACATTGAATCAAAGAGCTGAAGAAAAAGAAAAAGCACTTAATGAAATAAGAAATTCACAAGTAAGAAACGTATTA
AATGATTCCACAAAAACAATATCTAAAAAACAAGATGATAAATCTAAAGAAGAAATTAATTCTGAAACAAAACAAGAAAA
AACAAATAAGCAAGAATTGATTGCTTTCAGTAATAACGTTTCTACATATAAAAATAAGAGTGAAAAAGTAGATACAAAAA
AGGATTCAAATAATAAAGAAGAAAAACATGCAAAAGAAGTTATTGGGAAAACTTCTGTAGCTGAAAATTCAAAAAAATCA
GAATTAAAGAAAGAAAAATCTGAAGTTGCTTCATTAACTCTTTCAAGAAATTCTGAAAATGAAGAAGAAAAAATTTATTC
AAACATAACAAAATCAACAACTGGAGATTTGTTTGTAAGAGAAAAAGCGGATAAAGATTCTGAAGCAATAGGTGTTTTGC
CAAAAGATACTAAAGTTGTTGTTAAAGATAATAGCGATAATGCTTGGGCAAAGATTAACTATAAGAACAAAGAAGCATAC
GTAAGTAAGAGCTTCTTAGCTAATGAAAAATCAAATAAAAAAGTAATTTCAGAAAGCAAAAAGGAAGTTTCTAAAAAAAG
TCCACAAACTAAAACTGAAAAATCTGAAGGAAAATCTAAATCCTCTGAAAAATTAGTAGAAATGTGGGTTAAATCTCCAG
TTTATCTAAGAAGCGATAAATCAATCAGTTCTGATAAACTAGGTGTTTTAGAAAAGAACACTAAAGTACAAGGTAAACTT
GAAGATGGATGGTTTAAAACTTCTGCAAATGGGAAAAATGGTTTCATTAGTTTAAAATATTTGCAAAATAAAGAAATAAA
AGAAAAAGCATTCGATAAAATTCAAACTTCAGAAATTAAAAGTAATGAGCAAATAAAAAGCTCAAAATCTACAAGCTTTG
AAGGAACAAACTATACAGGATACGTAAAAGAATCTGTAAATGTTAGAGATAATGATAGCATGGATTCTAATGTTGTTTCA
GTATTAGAAAAAGGCACTAAGGTTAGCGGAATCAAAGGAAAATATTGGATTAAGATTTCAGAAGGAAGATATATTTCCGT
AAATTATGTACAAGATGATAAGGTTGATTTAAACCAATCAAGTAATGCAGAATCGACAGATTCATATAAAAAAGAATCTA
AAGCTAAAGTTGTAAGATCTAACGAAGGTGGTTCTGGAAGTGCTGTGGCACAAGCTGCATATAATTATTTGGGAGAAAAA
TATGTATGGGGTTCAGCTCAACCAGGCGTAGGATTTGATTGTTCAGGATTAACAAGCTATTTATATAATAAAGTATGTGG
TATATCGCTTTATAGAAACTCAGCAGCGCAGTCAAATAATGGATATCCTGTAAGTAAAAATAATTTAAAGCAAGGAGATT
TATTGTTCTTTAGCACAAATGGTTCTGGAAGTATATCACATGTTGGTATTTACGTAGGAAATGGAAAAATGATTCATGCC
TCAACTCCAAGTACAGGTGTAATTATTTCAGATATTGATTCGAATTATTATTCGGATACATTCGTAACAGCTAGAAGAAT
TCTTAATTAA

Upstream 100 bases:

>100_bases
ACTTTTTTGAAACTTATTTGTAACTTTTTTGTTGAATTTACTTGACATATGTTTTTTATTCTTTTAATATAATCTTAGGA
TGTATTAGGAGGAAGTTAAT

Downstream 100 bases:

>100_bases
AAATATAGGCTATTAGTATTAATACTAATAGCTTTTTTTATTGGACGAATTGCTTAAGCTTGTGATATTATTATATATAT
GGATAAAAGAGGCGTGTTAT

Product: putative N-acetylmuramoyl-L-alanine amidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 589; Mature: 589

Protein sequence:

>589_residues
MNKKGLGLSIGLASVIAVGTFVSPYLSSTTLIGDNSIESNQSLDSKYSVAVKNDSTLNQRAEEKEKALNEIRNSQVRNVL
NDSTKTISKKQDDKSKEEINSETKQEKTNKQELIAFSNNVSTYKNKSEKVDTKKDSNNKEEKHAKEVIGKTSVAENSKKS
ELKKEKSEVASLTLSRNSENEEEKIYSNITKSTTGDLFVREKADKDSEAIGVLPKDTKVVVKDNSDNAWAKINYKNKEAY
VSKSFLANEKSNKKVISESKKEVSKKSPQTKTEKSEGKSKSSEKLVEMWVKSPVYLRSDKSISSDKLGVLEKNTKVQGKL
EDGWFKTSANGKNGFISLKYLQNKEIKEKAFDKIQTSEIKSNEQIKSSKSTSFEGTNYTGYVKESVNVRDNDSMDSNVVS
VLEKGTKVSGIKGKYWIKISEGRYISVNYVQDDKVDLNQSSNAESTDSYKKESKAKVVRSNEGGSGSAVAQAAYNYLGEK
YVWGSAQPGVGFDCSGLTSYLYNKVCGISLYRNSAAQSNNGYPVSKNNLKQGDLLFFSTNGSGSISHVGIYVGNGKMIHA
STPSTGVIISDIDSNYYSDTFVTARRILN

Sequences:

>Translated_589_residues
MNKKGLGLSIGLASVIAVGTFVSPYLSSTTLIGDNSIESNQSLDSKYSVAVKNDSTLNQRAEEKEKALNEIRNSQVRNVL
NDSTKTISKKQDDKSKEEINSETKQEKTNKQELIAFSNNVSTYKNKSEKVDTKKDSNNKEEKHAKEVIGKTSVAENSKKS
ELKKEKSEVASLTLSRNSENEEEKIYSNITKSTTGDLFVREKADKDSEAIGVLPKDTKVVVKDNSDNAWAKINYKNKEAY
VSKSFLANEKSNKKVISESKKEVSKKSPQTKTEKSEGKSKSSEKLVEMWVKSPVYLRSDKSISSDKLGVLEKNTKVQGKL
EDGWFKTSANGKNGFISLKYLQNKEIKEKAFDKIQTSEIKSNEQIKSSKSTSFEGTNYTGYVKESVNVRDNDSMDSNVVS
VLEKGTKVSGIKGKYWIKISEGRYISVNYVQDDKVDLNQSSNAESTDSYKKESKAKVVRSNEGGSGSAVAQAAYNYLGEK
YVWGSAQPGVGFDCSGLTSYLYNKVCGISLYRNSAAQSNNGYPVSKNNLKQGDLLFFSTNGSGSISHVGIYVGNGKMIHA
STPSTGVIISDIDSNYYSDTFVTARRILN
>Mature_589_residues
MNKKGLGLSIGLASVIAVGTFVSPYLSSTTLIGDNSIESNQSLDSKYSVAVKNDSTLNQRAEEKEKALNEIRNSQVRNVL
NDSTKTISKKQDDKSKEEINSETKQEKTNKQELIAFSNNVSTYKNKSEKVDTKKDSNNKEEKHAKEVIGKTSVAENSKKS
ELKKEKSEVASLTLSRNSENEEEKIYSNITKSTTGDLFVREKADKDSEAIGVLPKDTKVVVKDNSDNAWAKINYKNKEAY
VSKSFLANEKSNKKVISESKKEVSKKSPQTKTEKSEGKSKSSEKLVEMWVKSPVYLRSDKSISSDKLGVLEKNTKVQGKL
EDGWFKTSANGKNGFISLKYLQNKEIKEKAFDKIQTSEIKSNEQIKSSKSTSFEGTNYTGYVKESVNVRDNDSMDSNVVS
VLEKGTKVSGIKGKYWIKISEGRYISVNYVQDDKVDLNQSSNAESTDSYKKESKAKVVRSNEGGSGSAVAQAAYNYLGEK
YVWGSAQPGVGFDCSGLTSYLYNKVCGISLYRNSAAQSNNGYPVSKNNLKQGDLLFFSTNGSGSISHVGIYVGNGKMIHA
STPSTGVIISDIDSNYYSDTFVTARRILN

Specific function: Unknown

COG id: COG0791

COG function: function code M; Cell wall-associated hydrolases (invasion-associated proteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nlpC/p60 family [H]

Homologues:

Organism=Escherichia coli, GI1787944, Length=117, Percent_Identity=40.1709401709402, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1786421, Length=116, Percent_Identity=41.3793103448276, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI1788501, Length=98, Percent_Identity=41.8367346938776, Blast_Score=83, Evalue=5e-17,
Organism=Escherichia coli, GI1788001, Length=97, Percent_Identity=40.2061855670103, Blast_Score=68, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000064 [H]

Pfam domain/function: PF00877 NLPC_P60 [H]

EC number: NA

Molecular weight: Translated: 64983; Mature: 64983

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKGLGLSIGLASVIAVGTFVSPYLSSTTLIGDNSIESNQSLDSKYSVAVKNDSTLNQR
CCCCCCEEEHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHH
AEEKEKALNEIRNSQVRNVLNDSTKTISKKQDDKSKEEINSETKQEKTNKQELIAFSNNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHEEEECCCC
STYKNKSEKVDTKKDSNNKEEKHAKEVIGKTSVAENSKKSELKKEKSEVASLTLSRNSEN
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHEEEEECCCCC
EEEKIYSNITKSTTGDLFVREKADKDSEAIGVLPKDTKVVVKDNSDNAWAKINYKNKEAY
HHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCHHH
VSKSFLANEKSNKKVISESKKEVSKKSPQTKTEKSEGKSKSSEKLVEMWVKSPVYLRSDK
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCEEEECCC
SISSDKLGVLEKNTKVQGKLEDGWFKTSANGKNGFISLKYLQNKEIKEKAFDKIQTSEIK
CCCCCCCCEEECCCCEEEEECCCEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHC
SNEQIKSSKSTSFEGTNYTGYVKESVNVRDNDSMDSNVVSVLEKGTKVSGIKGKYWIKIS
CCHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEC
EGRYISVNYVQDDKVDLNQSSNAESTDSYKKESKAKVVRSNEGGSGSAVAQAAYNYLGEK
CCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCE
YVWGSAQPGVGFDCSGLTSYLYNKVCGISLYRNSAAQSNNGYPVSKNNLKQGDLLFFSTN
EECCCCCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEC
GSGSISHVGIYVGNGKMIHASTPSTGVIISDIDSNYYSDTFVTARRILN
CCCCEEEEEEEECCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCC
>Mature Secondary Structure
MNKKGLGLSIGLASVIAVGTFVSPYLSSTTLIGDNSIESNQSLDSKYSVAVKNDSTLNQR
CCCCCCEEEHHHHHHHHHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEEEECCCCHHHHH
AEEKEKALNEIRNSQVRNVLNDSTKTISKKQDDKSKEEINSETKQEKTNKQELIAFSNNV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCHHHEEEECCCC
STYKNKSEKVDTKKDSNNKEEKHAKEVIGKTSVAENSKKSELKKEKSEVASLTLSRNSEN
HHHCCCCCCCCCCCCCCCHHHHHHHHHHHCHHHHCCCHHHHHHHHHHHHHEEEEECCCCC
EEEKIYSNITKSTTGDLFVREKADKDSEAIGVLPKDTKVVVKDNSDNAWAKINYKNKEAY
HHHHHHHHHHCCCCCCEEEEECCCCCCCEEEECCCCCEEEEEECCCCCEEEEEECCCHHH
VSKSFLANEKSNKKVISESKKEVSKKSPQTKTEKSEGKSKSSEKLVEMWVKSPVYLRSDK
HHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCHHHHCCCCHHHHHHHHHHCCCEEEECCC
SISSDKLGVLEKNTKVQGKLEDGWFKTSANGKNGFISLKYLQNKEIKEKAFDKIQTSEIK
CCCCCCCCEEECCCCEEEEECCCEEEECCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHC
SNEQIKSSKSTSFEGTNYTGYVKESVNVRDNDSMDSNVVSVLEKGTKVSGIKGKYWIKIS
CCHHHHCCCCCCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHCCCCCCCCCCEEEEEEC
EGRYISVNYVQDDKVDLNQSSNAESTDSYKKESKAKVVRSNEGGSGSAVAQAAYNYLGEK
CCCEEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHEEECCCCCCCHHHHHHHHHHCCCE
YVWGSAQPGVGFDCSGLTSYLYNKVCGISLYRNSAAQSNNGYPVSKNNLKQGDLLFFSTN
EECCCCCCCCCCCHHHHHHHHHHHHHCEEEECCCCCCCCCCCCCCCCCCCCCCEEEEEEC
GSGSISHVGIYVGNGKMIHASTPSTGVIISDIDSNYYSDTFVTARRILN
CCCCEEEEEEEECCCEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]