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The map label for this gene is ydjZ [H]

Identifier: 169823958

GI number: 169823958

Start: 309253

End: 309936

Strand: Direct

Name: ydjZ [H]

Synonym: FMG_0261

Alternate gene names: 169823958

Gene position: 309253-309936 (Clockwise)

Preceding gene: 169823957

Following gene: 169823961

Centisome position: 17.2

GC content: 36.26

Gene sequence:

>684_bases
TTGAAATTAGAAAATAAACATATCAAAAAAATTGTCGTTATTCTCATTGTGGTTCTTGCATTTGTATTTATCAAACCACT
CAGAGAAGGCGTGACTAACATGTCCAAAGCTTTTAAAGACCTTGAAAGTGTAAAAGCTTACATTAGATCGTTCGGAAAGA
CTGCGGTTGTAATTTCATTCTTGATGATGATTCTTCAATCAATTGCAGCGCCAATTCCAGCTTTCTTCATTACATTTTCT
AATGCAGCAATTTGGGGATGGGTCAGAGGAAGTATATTGTCTTGGACATCTGCAATGGCAGGAGCAGCTCTTTGTTTTGG
AATTGCAAGATTTTTGGGAAGAGATATTGCAGAAAAATTTGCTACAAAAGGAGCATTGAAAGAAGTGGAGGGATTCTTCG
ACAAATACGGCAAGAACGCTATTTTGGTTGCAAGATTATTGCCATTCGTTCCATTTGATCCGATAAGTTATGCAGCGGGA
TTAACACCGATGGGATTTTGGGAATTTTTCATCGCGACAGGAATAGGACAACTTCCAGCTACTTTGATTTATTCTTATGC
AGCAAGCAAATCCACAAATCCATCTACATGGGTAAAAGGACTTATAATTTTATTTGGAGTGTTTGCGCTTGGAATGTTGA
TGAAGAGAATTTATAACGATAAACAAGCAAAGAAAAATATATAA

Upstream 100 bases:

>100_bases
AATTTAATTCGTAAATTATAATAAATGATAAACACTTATAGAATATTTCAATAAGTGTTTATTTTTTTATTTGATATAAT
GAATATAAGGAGGGGTAATT

Downstream 100 bases:

>100_bases
AAAAGAAAGCCTCAAACTTTCCTAGAAAAAAACAAGCCCTTATGCAAATTTTTACATAAGGGCTTGTTTTTTTATATTAT
TTAATATTTTGATGTTAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 227

Protein sequence:

>227_residues
MKLENKHIKKIVVILIVVLAFVFIKPLREGVTNMSKAFKDLESVKAYIRSFGKTAVVISFLMMILQSIAAPIPAFFITFS
NAAIWGWVRGSILSWTSAMAGAALCFGIARFLGRDIAEKFATKGALKEVEGFFDKYGKNAILVARLLPFVPFDPISYAAG
LTPMGFWEFFIATGIGQLPATLIYSYAASKSTNPSTWVKGLIILFGVFALGMLMKRIYNDKQAKKNI

Sequences:

>Translated_227_residues
MKLENKHIKKIVVILIVVLAFVFIKPLREGVTNMSKAFKDLESVKAYIRSFGKTAVVISFLMMILQSIAAPIPAFFITFS
NAAIWGWVRGSILSWTSAMAGAALCFGIARFLGRDIAEKFATKGALKEVEGFFDKYGKNAILVARLLPFVPFDPISYAAG
LTPMGFWEFFIATGIGQLPATLIYSYAASKSTNPSTWVKGLIILFGVFALGMLMKRIYNDKQAKKNI
>Mature_227_residues
MKLENKHIKKIVVILIVVLAFVFIKPLREGVTNMSKAFKDLESVKAYIRSFGKTAVVISFLMMILQSIAAPIPAFFITFS
NAAIWGWVRGSILSWTSAMAGAALCFGIARFLGRDIAEKFATKGALKEVEGFFDKYGKNAILVARLLPFVPFDPISYAAG
LTPMGFWEFFIATGIGQLPATLIYSYAASKSTNPSTWVKGLIILFGVFALGMLMKRIYNDKQAKKNI

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI1788049, Length=228, Percent_Identity=50, Blast_Score=219, Evalue=2e-58,
Organism=Escherichia coli, GI87081964, Length=157, Percent_Identity=26.1146496815287, Blast_Score=72, Evalue=3e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25053; Mature: 25053

Theoretical pI: Translated: 10.65; Mature: 10.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLENKHIKKIVVILIVVLAFVFIKPLREGVTNMSKAFKDLESVKAYIRSFGKTAVVISF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
LMMILQSIAAPIPAFFITFSNAAIWGWVRGSILSWTSAMAGAALCFGIARFLGRDIAEKF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATKGALKEVEGFFDKYGKNAILVARLLPFVPFDPISYAAGLTPMGFWEFFIATGIGQLPA
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCHHHHH
TLIYSYAASKSTNPSTWVKGLIILFGVFALGMLMKRIYNDKQAKKNI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKLENKHIKKIVVILIVVLAFVFIKPLREGVTNMSKAFKDLESVKAYIRSFGKTAVVISF
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHH
LMMILQSIAAPIPAFFITFSNAAIWGWVRGSILSWTSAMAGAALCFGIARFLGRDIAEKF
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ATKGALKEVEGFFDKYGKNAILVARLLPFVPFDPISYAAGLTPMGFWEFFIATGIGQLPA
HHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHCCCHHHHHHHHHHHCCHHHHH
TLIYSYAASKSTNPSTWVKGLIILFGVFALGMLMKRIYNDKQAKKNI
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]